RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 SLC22A1O15245 554 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 TRIM3O75382 744 aaPredicted RBP12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 CATP04040 527 aaKnown RBP12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 CD1DP15813 335 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 NAE1Q13564 534 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 HKDC1Q2TB90 917 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 OGFRL1Q5TC84 451 aaPredicted RBP12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 FAM219BQ5XKK7 198 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 TXNDC8Q6A555 127 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 PM20D1Q6GTS8 502 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 DEF8Q6ZN54 512 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 DSG4Q86SJ6 1040 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 ADGRG6Q86SQ4 1221 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 OR52B6Q8NGF0 335 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 BIRC7Q96CA5 298 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 SPG21Q9NZD8 308 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 PHF11Q9UIL8 331 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 XIRP1Q702N8 1843 aaKnown RBP12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 XPNPEP2O43895 674 aa12.27□□□□□ -0.44
SLC6A1-201ENST00000287766 CLDN7O95471 211 aa12.27□□□□□ -0.44
SLC6A1-201ENST00000287766 ESR1P03372 595 aa12.27□□□□□ -0.44
SLC6A1-201ENST00000287766 ZNF865P0CJ78 1059 aaPredicted RBP12.27□□□□□ -0.44
SLC6A1-201ENST00000287766 PTGER3P43115 390 aa12.27□□□□□ -0.44
SLC6A1-201ENST00000287766 KIR3DL1P43629 444 aa12.27□□□□□ -0.44
SLC6A1-201ENST00000287766 ALDH3A2P51648 485 aa12.27□□□□□ -0.44
SLC6A1-201ENST00000287766 E2F2Q14209 437 aa12.27□□□□□ -0.44
SLC6A1-201ENST00000287766 C18orf21Q32NC0 220 aaPredicted RBP12.27□□□□□ -0.44
SLC6A1-201ENST00000287766 TPRG1LQ5T0D9 272 aa12.27□□□□□ -0.44
SLC6A1-201ENST00000287766 ZNF697Q5TEC3 545 aa12.27□□□□□ -0.44
SLC6A1-201ENST00000287766 FBXL19Q6PCT2 694 aa12.27□□□□□ -0.44
SLC6A1-201ENST00000287766 ASCC1Q8N9N2 400 aaKnown RBP12.27□□□□□ -0.44
SLC6A1-201ENST00000287766 PIK3R3Q92569 461 aa12.27□□□□□ -0.44
SLC6A1-201ENST00000287766 MNTQ99583 582 aa12.27□□□□□ -0.44
SLC6A1-201ENST00000287766 LRRC3Q9BY71 257 aa12.27□□□□□ -0.44
SLC6A1-201ENST00000287766 NEK6Q9HC98 313 aa12.27□□□□□ -0.44
SLC6A1-201ENST00000287766 ABCG2Q9UNQ0 655 aa12.27□□□□□ -0.44
SLC6A1-201ENST00000287766 AQP12BA6NM10 295 aa12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 NEDD8-MDP1E9PL57 170 aa12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 MYL9P24844 172 aa12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 CSKP41240 450 aa12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 PIGFQ07326 219 aa12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 SETMARQ53H47 684 aaPredicted RBP12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 PSAPL1Q6NUJ1 521 aa12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 ZNF517Q6ZMY9 492 aaPredicted RBP12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 ARHGAP12Q8IWW6 846 aa12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 AQP12AQ8IXF9 295 aa12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 MRPL48Q96GC5 212 aaKnown RBP12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 C3orf30Q96M34 536 aa12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 ZFP3Q96NJ6 502 aa12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 CGREF1Q99674 301 aa12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 INTS10Q9NVR2 710 aaKnown RBP12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 CDC14AQ9UNH5 594 aa12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 A0A1W2PP18 115 aa12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 ARVCFO00192 962 aa12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 CXCR6O00574 342 aa12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 SOCS2O14508 198 aa12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 RPLP0P05388 317 aaKnown RBP12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 UMPSP11172 480 aa12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 CDH1P12830 882 aa12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 ARRB2P32121 409 aa12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 HOXD12P35452 270 aa12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 ACADVLP49748 655 aa12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 SPANXN4Q5MJ08 99 aa12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 TRIM40Q6P9F5 258 aa12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 ZZZ3Q8IYH5 903 aa12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 TP53INP1Q96A56 240 aa12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 ITCHQ96J02 903 aa12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 PHOX2BQ99453 314 aa12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 IGSF5Q9NSI5 407 aa12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 NUDT4Q9NZJ9 180 aa12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 ARFGEF1Q9Y6D6 1849 aa12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 FAM234BA2RU67 622 aa12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 HTR3EA5X5Y0 456 aa12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 CLDN9O95484 217 aa12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 PGRP06401 933 aa12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 DNAJB13P59910 316 aa12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 ARHGAP15Q53QZ3 475 aa12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 LDLRAD1Q5T700 205 aa12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 CXXC5Q7LFL8 322 aaKnown RBP12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 HID1Q8IV36 788 aa12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 KAT2AQ92830 837 aa12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 KIAA1191Q96A73 305 aa12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 CCDC115Q96NT0 180 aa12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 TMEM39AQ9NV64 488 aa12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 PCDHGA7Q9Y5G6 932 aa12.27□□□□□ -0.45
SLC6A1-201ENST00000287766 SYN3O14994 580 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 GLUD1P00367 558 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 CAPN3P20807 821 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 PSMA3P25788 255 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 PRDX3P30048 256 aaKnown RBP12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 SDC2P34741 201 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 IFNGR2P38484 337 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 DGKEP52429 567 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 CHIT1Q13231 466 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 UBE2Q1Q7Z7E8 422 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 SYVN1Q86TM6 617 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 MINDY2Q8NBR6 621 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 TNFAIP8L1Q8WVP5 186 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 ZNF558Q96NG5 402 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 TMEM30AQ9NV96 361 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms