RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 RHOP08100 348 aa7.41□□□□□ -1.22
TRIM42-201ENST00000286349 POU2F2P09086 479 aa7.41□□□□□ -1.22
TRIM42-201ENST00000286349 HNRNPLP14866 589 aaKnown RBP eCLIP7.41□□□□□ -1.22
TRIM42-201ENST00000286349 FOSL2P15408 326 aa7.41□□□□□ -1.22
TRIM42-201ENST00000286349 RPS3P23396 243 aaKnown RBP eCLIP7.41□□□□□ -1.22
TRIM42-201ENST00000286349 FMO4P31512 558 aa7.41□□□□□ -1.22
TRIM42-201ENST00000286349 IL2P60568 153 aa7.41□□□□□ -1.22
TRIM42-201ENST00000286349 TIAL1Q01085 375 aaKnown RBP eCLIP7.41□□□□□ -1.22
TRIM42-201ENST00000286349 PTPRNQ16849 979 aa7.41□□□□□ -1.22
TRIM42-201ENST00000286349 RGS21Q2M5E4 152 aa7.41□□□□□ -1.22
TRIM42-201ENST00000286349 ZRANB3Q5FWF4 1079 aa7.41□□□□□ -1.22
TRIM42-201ENST00000286349 TCTE1Q5JU00 501 aa7.41□□□□□ -1.22
TRIM42-201ENST00000286349 PRSS36Q5K4E3 855 aa7.41□□□□□ -1.22
TRIM42-201ENST00000286349 DCDC5Q6ZRR9 648 aa7.41□□□□□ -1.22
TRIM42-201ENST00000286349 TMPRSS9Q7Z410 1059 aa7.41□□□□□ -1.22
TRIM42-201ENST00000286349 PIM3Q86V86 326 aa7.41□□□□□ -1.22
TRIM42-201ENST00000286349 PGAM4Q8N0Y7 254 aa7.41□□□□□ -1.22
TRIM42-201ENST00000286349 PELI3Q8N2H9 469 aa7.41□□□□□ -1.22
TRIM42-201ENST00000286349 PCYOX1LQ8NBM8 494 aa7.41□□□□□ -1.22
TRIM42-201ENST00000286349 FBXO27Q8NI29 283 aa7.41□□□□□ -1.22
TRIM42-201ENST00000286349 WBP2Q969T9 261 aa7.41□□□□□ -1.22
TRIM42-201ENST00000286349 RAB7BQ96AH8 199 aa7.41□□□□□ -1.22
TRIM42-201ENST00000286349 VPS33AQ96AX1 596 aa7.41□□□□□ -1.22
TRIM42-201ENST00000286349 ISG20Q96AZ6 181 aaKnown RBP7.41□□□□□ -1.22
TRIM42-201ENST00000286349 PTERQ96BW5 349 aa7.41□□□□□ -1.22
TRIM42-201ENST00000286349 NMD3Q96D46 503 aaKnown RBP7.41□□□□□ -1.22
TRIM42-201ENST00000286349 PANX3Q96QZ0 392 aa7.41□□□□□ -1.22
TRIM42-201ENST00000286349 ATOH8Q96SQ7 321 aa7.41□□□□□ -1.22
TRIM42-201ENST00000286349 C1QTNF3Q9BXJ4 246 aa7.41□□□□□ -1.22
TRIM42-201ENST00000286349 OSBPL6Q9BZF3 934 aa7.41□□□□□ -1.22
TRIM42-201ENST00000286349 PRDM6Q9NQX0 595 aa7.41□□□□□ -1.22
TRIM42-201ENST00000286349 TRNAU1APQ9NX07 287 aaKnown RBP7.41□□□□□ -1.22
TRIM42-201ENST00000286349 IL17CQ9P0M4 197 aa7.41□□□□□ -1.22
TRIM42-201ENST00000286349 CFAP97Q9P2B7 532 aa7.41□□□□□ -1.22
TRIM42-201ENST00000286349 THEGQ9P2T0 379 aa7.41□□□□□ -1.22
TRIM42-201ENST00000286349 SNX7Q9UNH6 387 aa7.41□□□□□ -1.22
TRIM42-201ENST00000286349 ERGIC3Q9Y282 383 aa7.41□□□□□ -1.22
TRIM42-201ENST00000286349 PCDHB9Q9Y5E1 797 aa7.41□□□□□ -1.22
TRIM42-201ENST00000286349 COL6A3P12111 3177 aa7.41□□□□□ -1.22
TRIM42-201ENST00000286349 ANKRD36A6QL64 1941 aa7.4□□□□□ -1.22
TRIM42-201ENST00000286349 ANAPC1Q9H1A4 1944 aa7.4□□□□□ -1.22
TRIM42-201ENST00000286349 OR6C74A6NCV1 312 aa7.4□□□□□ -1.22
TRIM42-201ENST00000286349 NEMP2A6NFY4 417 aa7.4□□□□□ -1.22
TRIM42-201ENST00000286349 MEI4A8MW99 385 aa7.4□□□□□ -1.22
TRIM42-201ENST00000286349 H3BQ06 376 aaPredicted RBP7.4□□□□□ -1.22
TRIM42-201ENST00000286349 HTRA2O43464 458 aaPredicted RBP7.4□□□□□ -1.22
TRIM42-201ENST00000286349 AKAP10O43572 662 aa7.4□□□□□ -1.22
TRIM42-201ENST00000286349 KLK8O60259 260 aa7.4□□□□□ -1.22
TRIM42-201ENST00000286349 KRT36O76013 467 aa7.4□□□□□ -1.22
TRIM42-201ENST00000286349 MLYCDO95822 493 aa7.4□□□□□ -1.22
TRIM42-201ENST00000286349 ZNF7P17097 686 aaPredicted RBP7.4□□□□□ -1.22
TRIM42-201ENST00000286349 SERPINA4P29622 427 aa7.4□□□□□ -1.22
TRIM42-201ENST00000286349 MLLT3P42568 568 aaPredicted RBP7.4□□□□□ -1.22
TRIM42-201ENST00000286349 CCR10P46092 362 aa7.4□□□□□ -1.22
TRIM42-201ENST00000286349 NUDT2P50583 147 aa7.4□□□□□ -1.22
TRIM42-201ENST00000286349 AP2S1P53680 142 aaPredicted RBP7.4□□□□□ -1.22
TRIM42-201ENST00000286349 STX1BP61266 288 aa7.4□□□□□ -1.22
TRIM42-201ENST00000286349 SNRPD1P62314 119 aaKnown RBP7.4□□□□□ -1.22
TRIM42-201ENST00000286349 CYP4F8P98187 520 aa7.4□□□□□ -1.22
TRIM42-201ENST00000286349 ART3Q13508 389 aa7.4□□□□□ -1.22
TRIM42-201ENST00000286349 PTPRCAPQ14761 206 aa7.4□□□□□ -1.22
TRIM42-201ENST00000286349 PPA1Q15181 289 aa7.4□□□□□ -1.22
TRIM42-201ENST00000286349 TSC22D1Q15714 1073 aa7.4□□□□□ -1.22
TRIM42-201ENST00000286349 KCTD21Q4G0X4 260 aa7.4□□□□□ -1.22
TRIM42-201ENST00000286349 UNC50Q53HI1 259 aa7.4□□□□□ -1.22
TRIM42-201ENST00000286349 INTS11Q5TA45 600 aaKnown RBP7.4□□□□□ -1.22
TRIM42-201ENST00000286349 ZDHHC20Q5W0Z9 365 aa7.4□□□□□ -1.22
TRIM42-201ENST00000286349 ANKS6Q68DC2 871 aa7.4□□□□□ -1.22
TRIM42-201ENST00000286349 LINGO4Q6UY18 593 aa7.4□□□□□ -1.22
TRIM42-201ENST00000286349 MACC1Q6ZN28 852 aa7.4□□□□□ -1.22
TRIM42-201ENST00000286349 KRT74Q7RTS7 529 aa7.4□□□□□ -1.22
TRIM42-201ENST00000286349 CBARPQ8N350 705 aaPredicted RBP7.4□□□□□ -1.22
TRIM42-201ENST00000286349 RYBPQ8N488 228 aaPredicted RBP7.4□□□□□ -1.22
TRIM42-201ENST00000286349 FBXO39Q8N4B4 442 aa7.4□□□□□ -1.22
TRIM42-201ENST00000286349 PTGR2Q8N8N7 351 aaPredicted RBP7.4□□□□□ -1.22
TRIM42-201ENST00000286349 LEMD2Q8NC56 503 aa7.4□□□□□ -1.22
TRIM42-201ENST00000286349 ITFG1Q8TB96 612 aa7.4□□□□□ -1.22
TRIM42-201ENST00000286349 SHKBP1Q8TBC3 707 aa7.4□□□□□ -1.22
TRIM42-201ENST00000286349 SMG7Q92540 1137 aaKnown RBP7.4□□□□□ -1.22
TRIM42-201ENST00000286349 TRIM63Q969Q1 353 aa7.4□□□□□ -1.22
TRIM42-201ENST00000286349 RAD51AP1Q96B01 352 aa7.4□□□□□ -1.22
TRIM42-201ENST00000286349 PDLIM5Q96HC4 596 aaKnown RBP7.4□□□□□ -1.22
TRIM42-201ENST00000286349 BIRC8Q96P09 236 aa7.4□□□□□ -1.22
TRIM42-201ENST00000286349 SLC22A12Q96S37 553 aa7.4□□□□□ -1.22
TRIM42-201ENST00000286349 DZANK1Q9NVP4 752 aa7.4□□□□□ -1.22
TRIM42-201ENST00000286349 FKBPLQ9UIM3 349 aa7.4□□□□□ -1.22
TRIM42-201ENST00000286349 FCF1Q9Y324 198 aaKnown RBP7.4□□□□□ -1.22
TRIM42-201ENST00000286349 COPG1Q9Y678 874 aaKnown RBP7.4□□□□□ -1.22
TRIM42-201ENST00000286349 FAM172BPA6NC97 362 aa7.4□□□□□ -1.23
TRIM42-201ENST00000286349 SUPT3HB4E1H0 165 aa7.4□□□□□ -1.23
TRIM42-201ENST00000286349 PRMT5O14744 637 aaPredicted RBP7.4□□□□□ -1.23
TRIM42-201ENST00000286349 GIPC1O14908 333 aa7.4□□□□□ -1.23
TRIM42-201ENST00000286349 ZCCHC18P0CG32 403 aa7.4□□□□□ -1.23
TRIM42-201ENST00000286349 CCNA2P20248 432 aa7.4□□□□□ -1.23
TRIM42-201ENST00000286349 ITGALP20701 1170 aa7.4□□□□□ -1.23
TRIM42-201ENST00000286349 KCNA5P22460 613 aa7.4□□□□□ -1.23
TRIM42-201ENST00000286349 PTX3P26022 381 aaPredicted RBP7.4□□□□□ -1.23
TRIM42-201ENST00000286349 NKX2-5P52952 324 aaPredicted RBP7.4□□□□□ -1.23
TRIM42-201ENST00000286349 ARFIP1P53367 373 aa7.4□□□□□ -1.23
TRIM42-201ENST00000286349 ZXDBP98169 803 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms