RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 TM9SF3Q9HD45 589 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 FKBP7Q9Y680 259 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 DGKBQ9Y6T7 804 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 ASTN1O14525 1302 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 RGPD2P0DJD1 1756 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 CADP27708 2225 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 D6RAR5 112 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 EOMESO95936 686 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 RHOQP17081 205 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 PAX7P23759 505 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 HOXA9P31269 272 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 MAP2K4P45985 399 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 HSD11B2P80365 405 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 CDKL1Q00532 357 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 CMPK2Q5EBM0 449 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 TSTD2Q5T7W7 516 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 LCLAT1Q6UWP7 414 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 COX18Q8N8Q8 333 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 RGMAQ96B86 450 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 LINGO1Q96FE5 620 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 LRIG1Q96JA1 1093 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 FCRL4Q96PJ5 515 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 LACRTQ9GZZ8 138 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 SLC35C2Q9NQQ7 365 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 SLC37A4O43826 429 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 PTTG1O95997 202 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 DBTP11182 482 aaKnown RBP5.96□□□□□ -1.46
VPS13D-201ENST00000011700 GNSP15586 552 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 ITGA3P26006 1051 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 GLUD2P49448 558 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 CACNB2Q08289 660 aaPredicted RBP5.96□□□□□ -1.46
VPS13D-201ENST00000011700 NOGQ13253 232 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 C9orf64Q5T6V5 341 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 FAAH2Q6GMR7 532 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 SLC30A10Q6XR72 485 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 ZNF550Q7Z398 422 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 CAMKVQ8NCB2 501 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 BORCS7Q96B45 105 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 RAB39BQ96DA2 213 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 CPXM1Q96SM3 734 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 YIPF4Q9BSR8 244 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 TRNAU1APQ9NX07 287 aaKnown RBP5.96□□□□□ -1.46
VPS13D-201ENST00000011700 GDAP2Q9NXN4 497 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 MED31Q9Y3C7 131 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 NAP1L6A6NFF2 107 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 SOCS5O75159 536 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 TIPRLO75663 272 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 GTF2F2P13984 249 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 ZNF20P17024 532 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 DRD4P21917 467 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 MATN1P21941 496 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 ACTR1AP61163 376 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 HNRNPDQ14103 355 aaKnown RBP5.96□□□□□ -1.46
VPS13D-201ENST00000011700 FNBP1LQ5T0N5 605 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 NUDT13Q86X67 352 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 ZNF565Q8N9K5 539 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 RNF128Q8TEB7 428 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 FUCA2Q9BTY2 467 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 RIOK2Q9BVS4 552 aaKnown RBP5.96□□□□□ -1.46
VPS13D-201ENST00000011700 HCN2Q9UL51 889 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 C1orf167Q5SNV9 1468 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 PPM1BO75688 479 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 UGT2B4P06133 528 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 THEGLP0DJG4 465 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 PPP5CP53041 499 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 SPOCK1Q08629 439 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 SCARF1Q14162 830 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 BTG3Q14201 252 aaPredicted RBP5.96□□□□□ -1.46
VPS13D-201ENST00000011700 RAB39AQ14964 217 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 KIAA0930Q6ICG6 404 aaPredicted RBP5.96□□□□□ -1.46
VPS13D-201ENST00000011700 MBOAT1Q6ZNC8 495 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 CHFRQ96EP1 664 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 MBOAT7Q96N66 472 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 TFB2MQ9H5Q4 396 aaKnown RBP5.96□□□□□ -1.46
VPS13D-201ENST00000011700 MAGIXQ9H6Y5 334 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 TAS2R10Q9NYW0 307 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 CYTH4Q9UIA0 394 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 ASF1AQ9Y294 204 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 C10orf71Q711Q0 1435 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 PHLPP1O60346 1717 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 ARPC4-TTLL3A0A0A6YYG9 625 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 TRIM64CA6NLI5 447 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 ANKRD65E5RJM6 399 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 HCN1O60741 890 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 PRAF2O60831 178 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 ZBTB11O95625 1053 aaPredicted RBP5.96□□□□□ -1.46
VPS13D-201ENST00000011700 CSTBP04080 98 aaKnown RBP5.96□□□□□ -1.46
VPS13D-201ENST00000011700 PSMB4P28070 264 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 AFF1P51825 1210 aaKnown RBP5.96□□□□□ -1.46
VPS13D-201ENST00000011700 ST3GAL3Q11203 375 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 NAA30Q147X3 362 aaPredicted RBP5.96□□□□□ -1.46
VPS13D-201ENST00000011700 USP50Q70EL3 339 aaPredicted RBP5.96□□□□□ -1.46
VPS13D-201ENST00000011700 LIX1LQ8IVB5 337 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 LGI2Q8N0V4 545 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 RAD51AP1Q96B01 352 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.96□□□□□ -1.46
VPS13D-201ENST00000011700 TRPV4Q9HBA0 871 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 LINC00854A0A1B0GVQ3 168 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 TRIM64A6NGJ6 449 aa5.96□□□□□ -1.46
VPS13D-201ENST00000011700 ACOX3O15254 700 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms