RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Polr2cP97760 275 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Prss55Q14BX2 321 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Dalrd3Q6PJN8 538 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Olfr664Q7TRP5 306 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Sra1Q80VJ2 232 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 D3Ertd751eQ8BGN2 192 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Mief1Q8BGV8 463 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 4933402J07RikQ8BHX0 270 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Fmo9Q8C116 539 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 IlkapQ8R0F6 392 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Cant1Q8VCF1 403 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Zcchc14Q8VIG0 956 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Pcdhb21Q91V48 774 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Lgals12Q91VD1 314 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Pcdhga9Q91XX9 932 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Necab3Q9D6J4 353 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 AcadsbQ9DBL1 432 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Orc6Q9WUJ8 262 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Mad2l1Q9Z1B5 205 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Deaf1Q9Z1T5 566 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Gm3854A0A1B0GSS6 495 aa10.65□□□□□ -0.71
Msh3-201ENSMUST00000022220 Tmem236A2ARJ3 344 aa10.65□□□□□ -0.71
Msh3-201ENSMUST00000022220 Clip3B9EHT4 547 aa10.65□□□□□ -0.71
Msh3-201ENSMUST00000022220 Gm5861F6VCN9 180 aa10.65□□□□□ -0.71
Msh3-201ENSMUST00000022220 Kcng2F7A6P6 480 aa10.65□□□□□ -0.71
Msh3-201ENSMUST00000022220 4933402N22RikF7D1B3 190 aa10.65□□□□□ -0.71
Msh3-201ENSMUST00000022220 Gm5724L7N264 670 aa10.65□□□□□ -0.71
Msh3-201ENSMUST00000022220 Klrb1aP27811 227 aa10.65□□□□□ -0.71
Msh3-201ENSMUST00000022220 Alox12P39655 663 aa10.65□□□□□ -0.71
Msh3-201ENSMUST00000022220 Dlx2P40764 332 aa10.65□□□□□ -0.71
Msh3-201ENSMUST00000022220 Bmp1P98063 991 aa10.65□□□□□ -0.71
Msh3-201ENSMUST00000022220 Tnpo3Q6P2B1 923 aaKnown RBP10.65□□□□□ -0.71
Msh3-201ENSMUST00000022220 ZfatQ7TS63 1237 aa10.65□□□□□ -0.71
Msh3-201ENSMUST00000022220 Q8BH50 245 aa10.65□□□□□ -0.71
Msh3-201ENSMUST00000022220 Hspbap1Q8BK58 483 aa10.65□□□□□ -0.71
Msh3-201ENSMUST00000022220 Cfap20Q8BTU1 193 aa10.65□□□□□ -0.71
Msh3-201ENSMUST00000022220 Lacc1Q8BZT9 430 aa10.65□□□□□ -0.71
Msh3-201ENSMUST00000022220 Fam161aQ8QZV6 448 aa10.65□□□□□ -0.71
Msh3-201ENSMUST00000022220 Etv3Q8R4Z4 513 aa10.65□□□□□ -0.71
Msh3-201ENSMUST00000022220 Fam20bQ8VCS3 409 aa10.65□□□□□ -0.71
Msh3-201ENSMUST00000022220 Imp4Q8VHZ7 291 aaKnown RBP10.65□□□□□ -0.71
Msh3-201ENSMUST00000022220 Chmp1b1Q99LU0 199 aa10.65□□□□□ -0.71
Msh3-201ENSMUST00000022220 Ilf2Q9CXY6 390 aaKnown RBP10.65□□□□□ -0.71
Msh3-201ENSMUST00000022220 Shmt2Q9CZN7 504 aaKnown RBP10.65□□□□□ -0.71
Msh3-201ENSMUST00000022220 Agpat5Q9D1E8 365 aa10.65□□□□□ -0.71
Msh3-201ENSMUST00000022220 B9d1Q9R1S0 204 aa10.65□□□□□ -0.71
Msh3-201ENSMUST00000022220 Asb4Q9WV71 426 aa10.65□□□□□ -0.71
Msh3-201ENSMUST00000022220 Gm29106A0A087WSP8 697 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Vmn2r54K7N649 806 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Slc2a3P32037 493 aaKnown RBP10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Wbp2P97765 261 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Fmo5P97872 533 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Faf2Q3TDN2 445 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Prss53Q571E5 552 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Zfp606Q7TSV0 794 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Aifm2Q8BUE4 373 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Gk5Q8BX05 534 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Zfp57Q8C6P8 421 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Timd2Q8R183 305 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Gpn2Q8VEJ1 310 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Lrrc49Q91YK0 686 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Lrrc4Q99PH1 652 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Cep97Q9CZ62 856 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Snrnp48Q9D361 337 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Armc1Q9D7A8 282 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Usp12Q9D9M2 370 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Hcar2Q9EP66 360 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Slc28a3Q9ERH8 703 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Lmx1aQ9JKU8 382 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Zswim8Q3UHH1 1832 aaKnown RBP10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Togaram1Q6A070 1776 aaKnown RBP10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Tsc2Q61037 1814 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Pkd2l1A2A259 760 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Vmn2r120E9PX34 856 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Gm597E9Q8J5 896 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Olfr319L7MTY4 306 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Gm8926L7MUE8 181 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Sema3aO08665 772 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Cbx4O55187 551 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Dmp1O55188 503 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Tp63O88898 680 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Psmd3P14685 530 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Hp1bp3Q3TEA8 554 aaKnown RBP10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Pnrc1Q3TWH3 297 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 NkaplQ5SZT7 395 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Sox11Q7M6Y2 395 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Rab39aQ8BHD0 217 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Vrk2Q8BN21 503 aaKnown RBP10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Olfr606Q8VGZ8 319 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Sult5a1Q91X36 291 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Get4Q9D1H7 327 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Nek6Q9ES70 313 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Ehd3Q9QXY6 535 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Igkv18-36A0A075B5M9 114 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 AccsA2AIG8 502 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Serpine3E9Q6A2 401 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Dnmt3bO88509 859 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 F3P20352 294 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 GsrP47791 500 aa10.64□□□□□ -0.71
Msh3-201ENSMUST00000022220 Ap1s1P61967 158 aa10.64□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 46.6 ms