RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Zfp64Q99KE8 643 aa16.48■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Zbp1Q9QY24 411 aa16.48■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Tsc22d3Q9Z2S7 137 aa16.48■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Kif28pD3YXS5 1028 aa16.48■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Nat2P50295 290 aa16.48■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Malt1Q2TBA3 832 aa16.48■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Brsk1Q5RJI5 778 aa16.48■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Smarcd1Q61466 515 aaKnown RBP16.48■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Cdc26Q99JP4 85 aa16.48■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Q9D4A5 307 aa16.48■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Tlr1Q9EPQ1 795 aa16.48■□□□□ 0.23
Ctcf-201ENSMUST00000005841 MndalD0QMC3 538 aaKnown RBP16.47■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Gimd1E9PW74 217 aa16.47■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Pax3P24610 479 aa16.47■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Htr1bP28334 386 aa16.47■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Arl1P61211 181 aa16.47■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Uba1Q02053 1058 aaKnown RBP16.47■□□□□ 0.23
Ctcf-201ENSMUST00000005841 IdsQ08890 552 aa16.47■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Cstf2Q8BIQ5 580 aaKnown RBP16.47■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Lpcat2Q8BYI6 544 aa16.47■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Ppwd1Q8CEC6 646 aaKnown RBP16.47■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Nedd4lQ8CFI0 1004 aa16.47■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Mroh7A2AVR2 1279 aa16.47■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Skint11A7XV14 364 aa16.47■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Eef1a2P62631 463 aaKnown RBP16.47■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Cxcr5Q04683 374 aa16.47■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Il18r1Q61098 537 aa16.47■□□□□ 0.23
Ctcf-201ENSMUST00000005841 VwdeQ6DFV8 926 aa16.47■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Snx6Q6P8X1 406 aa16.47■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Zbtb33Q8BN78 671 aa16.47■□□□□ 0.23
Ctcf-201ENSMUST00000005841 NotumQ8R116 503 aa16.47■□□□□ 0.23
Ctcf-201ENSMUST00000005841 H2afjQ8R1M2 129 aa16.47■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Q91V76 315 aa16.47■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Pcdhac2Q91Y09 1006 aa16.47■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Asb9Q91ZT8 290 aa16.47■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Col25a1Q99MQ5 666 aa16.47■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Gtf2e2Q9D902 292 aa16.47■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Prmt1Q9JIF0 371 aa16.47■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Acot2Q9QYR9 453 aa16.47■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Acox1Q9R0H0 661 aaKnown RBP16.47■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Rgs6Q9Z2H2 472 aa16.47■□□□□ 0.23
Ctcf-201ENSMUST00000005841 TpmtO55060 240 aa16.47■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Fabp7P51880 132 aa16.47■□□□□ 0.23
Ctcf-201ENSMUST00000005841 WasP70315 520 aa16.47■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Gbx1P82976 418 aa16.47■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Rtl3Q6P1Y1 553 aa16.47■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Ska3Q8C263 411 aa16.47■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Adgrg1Q8K209 687 aa16.47■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Ndufs2Q91WD5 463 aa16.47■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Diras1Q91Z61 198 aa16.47■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Mthfd1Q922D8 935 aa16.47■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Ndufv2Q9D6J6 248 aa16.47■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Scamp5Q9JKD3 235 aa16.47■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Fbxo17Q9QZM8 286 aa16.47■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Stau1Q9Z108 487 aaKnown RBP16.47■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Mtmr7Q9Z2C9 660 aa16.47■□□□□ 0.23
Ctcf-201ENSMUST00000005841 UtrnE9Q6R7 3430 aa16.46■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Gm8237E9Q257 205 aa16.46■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Arhgap40E9Q6X9 672 aa16.46■□□□□ 0.23
Ctcf-201ENSMUST00000005841 FiglaO55208 194 aa16.46■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Entpd1P55772 510 aa16.46■□□□□ 0.23
Ctcf-201ENSMUST00000005841 VldlrP98156 873 aa16.46■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Msi1Q61474 362 aaKnown RBP16.46■□□□□ 0.23
Ctcf-201ENSMUST00000005841 BegainQ68EF6 600 aa16.46■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Rnf219Q8K2Y0 722 aa16.46■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Kiaa0513Q8R0A7 407 aa16.46■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Akr1d1Q8VCX1 325 aa16.46■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Olfr1311Q8VET0 312 aa16.46■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Olfr729Q8VET4 323 aa16.46■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Taf1dQ9D4V4 322 aa16.46■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Clic1Q9Z1Q5 241 aaKnown RBP16.46■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Dpp6Q9Z218 804 aa16.46■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Alpk2Q91ZB0 2144 aa16.46■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Esp18A8R0V1 91 aa16.46■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Barhl1P63157 327 aa16.46■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Mdga1Q0PMG2 940 aa16.46■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Bpifa6Q0VGU8 367 aa16.46■□□□□ 0.23
Ctcf-201ENSMUST00000005841 OsbpQ3B7Z2 805 aa16.46■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Eml4Q3UMY5 988 aa16.46■□□□□ 0.23
Ctcf-201ENSMUST00000005841 StradaQ3UUJ4 431 aa16.46■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Kcnk10Q8BUW1 535 aa16.46■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Acap1Q8K2H4 740 aa16.46■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Vmn1r6Q8R2D4 303 aa16.46■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Olfr1310Q8VF85 312 aa16.46■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Golga7Q91W53 137 aa16.46■□□□□ 0.23
Ctcf-201ENSMUST00000005841 EtfdhQ921G7 616 aa16.46■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Pycr2Q922Q4 320 aaKnown RBP16.46■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Sytl2Q99N50 950 aa16.46■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Trim12aQ99PQ1 284 aa16.46■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Upk1bQ9Z2C6 260 aa16.46■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Pappa2E9PZ87 1789 aa16.46■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Lamp1P11438 406 aaKnown RBP16.46■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Tigd2Q0VBL1 525 aa16.46■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Fpr-rs6Q3SXG2 339 aa16.46■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Eef2kmtQ3UZW7 335 aa16.46■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Tmub2Q3V209 319 aa16.46■□□□□ 0.22
Ctcf-201ENSMUST00000005841 AW551984Q8BGF0 804 aa16.46■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Bag5Q8CI32 447 aa16.46■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Olfr30Q8VGD8 315 aa16.46■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Acsl6Q91WC3 697 aa16.46■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 33.5 ms