RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	OR1L3	Q8NH93	324 aa		14.51	□□□□□ -0.09
PHGDH-231	ENST00000641939	MAGEC3	Q8TD91	643 aa		14.51	□□□□□ -0.09
PHGDH-231	ENST00000641939	STARD8	Q92502	1023 aa		14.51	□□□□□ -0.09
PHGDH-231	ENST00000641939	KCNJ9	Q92806	393 aa		14.51	□□□□□ -0.09
PHGDH-231	ENST00000641939	TRIM31	Q9BZY9	425 aa		14.51	□□□□□ -0.09
PHGDH-231	ENST00000641939	TSR3	Q9UJK0	312 aa	Known RBP	14.51	□□□□□ -0.09
PHGDH-231	ENST00000641939	SERTAD3	Q9UJW9	196 aa		14.51	□□□□□ -0.09
PHGDH-231	ENST00000641939	KCND3	Q9UK17	655 aa		14.51	□□□□□ -0.09
PHGDH-231	ENST00000641939	MRPS18B	Q9Y676	258 aa	Known RBP	14.51	□□□□□ -0.09
PHGDH-231	ENST00000641939	BOD1L1	Q8NFC6	3051 aa		14.5	□□□□□ -0.09
PHGDH-231	ENST00000641939	CCDC88C	Q9P219	2028 aa		14.5	□□□□□ -0.09
PHGDH-231	ENST00000641939	EFCAB8	A8MWE9	144 aa		14.5	□□□□□ -0.09
PHGDH-231	ENST00000641939	TERT	O14746	1132 aa	Known RBP	14.5	□□□□□ -0.09
PHGDH-231	ENST00000641939	NKX2-8	O15522	239 aa		14.5	□□□□□ -0.09
PHGDH-231	ENST00000641939	HAUS5	O94927	633 aa		14.5	□□□□□ -0.09
PHGDH-231	ENST00000641939	PRB1	P04280	392 aa		14.5	□□□□□ -0.09
PHGDH-231	ENST00000641939	TCN2	P20062	427 aa		14.5	□□□□□ -0.09
PHGDH-231	ENST00000641939	CYP2A7	P20853	494 aa		14.5	□□□□□ -0.09
PHGDH-231	ENST00000641939	ELK3	P41970	407 aa		14.5	□□□□□ -0.09
PHGDH-231	ENST00000641939	ITGA1	P56199	1179 aa		14.5	□□□□□ -0.09
PHGDH-231	ENST00000641939	ARL4C	P56559	192 aa		14.5	□□□□□ -0.09
PHGDH-231	ENST00000641939	LY6D	Q14210	128 aa		14.5	□□□□□ -0.09
PHGDH-231	ENST00000641939	TBR1	Q16650	682 aa		14.5	□□□□□ -0.09
PHGDH-231	ENST00000641939	HIF1A	Q16665	826 aa		14.5	□□□□□ -0.09
PHGDH-231	ENST00000641939	KLHL38	Q2WGJ6	581 aa		14.5	□□□□□ -0.09
PHGDH-231	ENST00000641939	TTLL9	Q3SXZ7	439 aa		14.5	□□□□□ -0.09
PHGDH-231	ENST00000641939	LINC00303	Q3SY05	128 aa		14.5	□□□□□ -0.09
PHGDH-231	ENST00000641939	CRTC2	Q53ET0	693 aa	Predicted RBP	14.5	□□□□□ -0.09
PHGDH-231	ENST00000641939	ACSBG2	Q5FVE4	666 aa		14.5	□□□□□ -0.09
PHGDH-231	ENST00000641939	SYT10	Q6XYQ8	523 aa		14.5	□□□□□ -0.09
PHGDH-231	ENST00000641939	NEK10	Q6ZWH5	1172 aa		14.5	□□□□□ -0.09
PHGDH-231	ENST00000641939	TAX1BP1	Q86VP1	789 aa		14.5	□□□□□ -0.09
PHGDH-231	ENST00000641939	LMNTD1	Q8N9Z9	388 aa		14.5	□□□□□ -0.09
PHGDH-231	ENST00000641939	C2CD4A	Q8NCU7	369 aa	Predicted RBP	14.5	□□□□□ -0.09
PHGDH-231	ENST00000641939	SPATA4	Q8NEY3	305 aa		14.5	□□□□□ -0.09
PHGDH-231	ENST00000641939	LRRC39	Q96DD0	335 aa		14.5	□□□□□ -0.09
PHGDH-231	ENST00000641939	PWWP2A	Q96N64	755 aa		14.5	□□□□□ -0.09
PHGDH-231	ENST00000641939	LRFN5	Q96NI6	719 aa		14.5	□□□□□ -0.09
PHGDH-231	ENST00000641939	CATSPER2	Q96P56	530 aa		14.5	□□□□□ -0.09
PHGDH-231	ENST00000641939	SLC30A3	Q99726	388 aa		14.5	□□□□□ -0.09
PHGDH-231	ENST00000641939	FAM60A	Q9NP50	221 aa		14.5	□□□□□ -0.09
PHGDH-231	ENST00000641939	MED16	Q9Y2X0	877 aa		14.5	□□□□□ -0.09
PHGDH-231	ENST00000641939	PCDHGA6	Q9Y5G7	932 aa		14.5	□□□□□ -0.09
PHGDH-231	ENST00000641939	C21orf140	B9A014	251 aa		14.49	□□□□□ -0.09
PHGDH-231	ENST00000641939	NDC80	O14777	642 aa		14.49	□□□□□ -0.09
PHGDH-231	ENST00000641939	PSIP1	O75475	530 aa	Known RBP	14.49	□□□□□ -0.09
PHGDH-231	ENST00000641939	PRKAR1A	P10644	381 aa		14.49	□□□□□ -0.09
PHGDH-231	ENST00000641939	RPL21	P46778	160 aa	Known RBP	14.49	□□□□□ -0.09
PHGDH-231	ENST00000641939	CDC20	Q12834	499 aa		14.49	□□□□□ -0.09
PHGDH-231	ENST00000641939	DNASE1L3	Q13609	305 aa		14.49	□□□□□ -0.09
PHGDH-231	ENST00000641939	CCSMST1	Q4G0I0	132 aa		14.49	□□□□□ -0.09
PHGDH-231	ENST00000641939	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	14.49	□□□□□ -0.09
PHGDH-231	ENST00000641939	PRAMEF17	Q5VTA0	474 aa		14.49	□□□□□ -0.09
PHGDH-231	ENST00000641939	KIAA0408	Q6ZU52	694 aa		14.49	□□□□□ -0.09
PHGDH-231	ENST00000641939	CNTN4	Q8IWV2	1026 aa		14.49	□□□□□ -0.09
PHGDH-231	ENST00000641939	GPR135	Q8IZ08	494 aa		14.49	□□□□□ -0.09
PHGDH-231	ENST00000641939	SLC38A9	Q8NBW4	561 aa		14.49	□□□□□ -0.09
PHGDH-231	ENST00000641939	GIMAP7	Q8NHV1	300 aa		14.49	□□□□□ -0.09
PHGDH-231	ENST00000641939	CT55	Q8WUE5	264 aa		14.49	□□□□□ -0.09
PHGDH-231	ENST00000641939	N4BP2L2	Q92802	583 aa	Predicted RBP	14.49	□□□□□ -0.09
PHGDH-231	ENST00000641939	INPP5D	Q92835	1189 aa		14.49	□□□□□ -0.09
PHGDH-231	ENST00000641939	CLIP3	Q96DZ5	547 aa		14.49	□□□□□ -0.09
PHGDH-231	ENST00000641939	CERS2	Q96G23	380 aa		14.49	□□□□□ -0.09
PHGDH-231	ENST00000641939	CFAP36	Q96G28	342 aa		14.49	□□□□□ -0.09
PHGDH-231	ENST00000641939	GPR21	Q99679	349 aa		14.49	□□□□□ -0.09
PHGDH-231	ENST00000641939	ARHGAP9	Q9BRR9	750 aa		14.49	□□□□□ -0.09
PHGDH-231	ENST00000641939	AARSD1	Q9BTE6	412 aa	Known RBP	14.49	□□□□□ -0.09
PHGDH-231	ENST00000641939	ACTR5	Q9H9F9	607 aa	Predicted RBP	14.49	□□□□□ -0.09
PHGDH-231	ENST00000641939	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	14.49	□□□□□ -0.09
PHGDH-231	ENST00000641939	PLAC1	Q9HBJ0	212 aa		14.49	□□□□□ -0.09
PHGDH-231	ENST00000641939	SPATA7	Q9P0W8	599 aa		14.49	□□□□□ -0.09
PHGDH-231	ENST00000641939	ZC3H7B	Q9UGR2	993 aa	Known RBP	14.49	□□□□□ -0.09
PHGDH-231	ENST00000641939	CHMP2B	Q9UQN3	213 aa		14.49	□□□□□ -0.09
PHGDH-231	ENST00000641939	SNX24	Q9Y343	169 aa		14.49	□□□□□ -0.09
PHGDH-231	ENST00000641939	DHRS7	Q9Y394	339 aa		14.49	□□□□□ -0.09
PHGDH-231	ENST00000641939	TEX264	Q9Y6I9	313 aa		14.49	□□□□□ -0.09
PHGDH-231	ENST00000641939	ZNF462	Q96JM2	2506 aa		14.49	□□□□□ -0.09
PHGDH-231	ENST00000641939	MDC1	Q14676	2089 aa	Known RBP	14.48	□□□□□ -0.09
PHGDH-231	ENST00000641939	KRT87P	A6NCN2	255 aa		14.48	□□□□□ -0.09
PHGDH-231	ENST00000641939	FAM187A	A6NFU0	413 aa		14.48	□□□□□ -0.09
PHGDH-231	ENST00000641939	ARHGEF33	A8MVX0	844 aa		14.48	□□□□□ -0.09
PHGDH-231	ENST00000641939		E7EQ34	232 aa		14.48	□□□□□ -0.09
PHGDH-231	ENST00000641939	TP73	O15350	636 aa		14.48	□□□□□ -0.09
PHGDH-231	ENST00000641939	VPS26A	O75436	327 aa		14.48	□□□□□ -0.09
PHGDH-231	ENST00000641939	KATNA1	O75449	491 aa		14.48	□□□□□ -0.09
PHGDH-231	ENST00000641939	FKBP9	O95302	570 aa		14.48	□□□□□ -0.09
PHGDH-231	ENST00000641939	CAT	P04040	527 aa	Known RBP	14.48	□□□□□ -0.09
PHGDH-231	ENST00000641939	KLK3	P07288	261 aa	Predicted RBP	14.48	□□□□□ -0.09
PHGDH-231	ENST00000641939	ENO3	P13929	434 aa	Predicted RBP	14.48	□□□□□ -0.09
PHGDH-231	ENST00000641939	MAG	P20916	626 aa		14.48	□□□□□ -0.09
PHGDH-231	ENST00000641939	GABRA4	P48169	554 aa		14.48	□□□□□ -0.09
PHGDH-231	ENST00000641939	CARS	P49589	748 aa	Known RBP	14.48	□□□□□ -0.09
PHGDH-231	ENST00000641939	GPS2	Q13227	327 aa		14.48	□□□□□ -0.09
PHGDH-231	ENST00000641939	CUL1	Q13616	776 aa		14.48	□□□□□ -0.09
PHGDH-231	ENST00000641939	SF1	Q15637	639 aa	Known RBP	14.48	□□□□□ -0.09
PHGDH-231	ENST00000641939	DEFB110	Q30KQ9	67 aa		14.48	□□□□□ -0.09
PHGDH-231	ENST00000641939	STEAP4	Q687X5	459 aa		14.48	□□□□□ -0.09
PHGDH-231	ENST00000641939	C16orf46	Q6P387	395 aa		14.48	□□□□□ -0.09
PHGDH-231	ENST00000641939	FAM199X	Q6PEV8	388 aa	Predicted RBP	14.48	□□□□□ -0.09
PHGDH-231	ENST00000641939	BORA	Q6PGQ7	559 aa		14.48	□□□□□ -0.09

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