RNA–Protein interactions for RNA: ENST00000635152.1

BRF1-222, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,876 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-222ENST00000635152 TMEM39AQ9NV64 488 aa12.77□□□□□ -0.37
BRF1-222ENST00000635152 IFT80Q9P2H3 777 aaPredicted RBP12.77□□□□□ -0.37
BRF1-222ENST00000635152 UNC80Q8N2C7 3258 aa12.77□□□□□ -0.37
BRF1-222ENST00000635152 OR2AG2A6NM03 316 aa12.76□□□□□ -0.37
BRF1-222ENST00000635152 THRBP10828 461 aa12.76□□□□□ -0.37
BRF1-222ENST00000635152 SHMT2P34897 504 aa12.76□□□□□ -0.37
BRF1-222ENST00000635152 CDKN2CP42773 168 aa12.76□□□□□ -0.37
BRF1-222ENST00000635152 ZBED5Q49AG3 693 aa12.76□□□□□ -0.37
BRF1-222ENST00000635152 TMC8Q8IU68 726 aa12.76□□□□□ -0.37
BRF1-222ENST00000635152 CPXM2Q8N436 756 aa12.76□□□□□ -0.37
BRF1-222ENST00000635152 NETO1Q8TDF5 533 aa12.76□□□□□ -0.37
BRF1-222ENST00000635152 UBTD2Q8WUN7 234 aa12.76□□□□□ -0.37
BRF1-222ENST00000635152 SDCCAG3Q96C92 435 aa12.76□□□□□ -0.37
BRF1-222ENST00000635152 LYSMD1Q96S90 227 aa12.76□□□□□ -0.37
BRF1-222ENST00000635152 YME1L1Q96TA2 773 aa12.76□□□□□ -0.37
BRF1-222ENST00000635152 NAA50Q9GZZ1 169 aaKnown RBP12.76□□□□□ -0.37
BRF1-222ENST00000635152 GORASP2Q9H8Y8 452 aa12.76□□□□□ -0.37
BRF1-222ENST00000635152 C8orf4Q9NR00 106 aa12.76□□□□□ -0.37
BRF1-222ENST00000635152 TUBA8Q9NY65 449 aaPredicted RBP12.76□□□□□ -0.37
BRF1-222ENST00000635152 A0A1W2PQ67 120 aa12.76□□□□□ -0.37
BRF1-222ENST00000635152 ACRP10323 421 aa12.76□□□□□ -0.37
BRF1-222ENST00000635152 WEE1P30291 646 aa12.76□□□□□ -0.37
BRF1-222ENST00000635152 S100A3P33764 101 aa12.76□□□□□ -0.37
BRF1-222ENST00000635152 CCR2P41597 374 aa12.76□□□□□ -0.37
BRF1-222ENST00000635152 HALP42357 657 aa12.76□□□□□ -0.37
BRF1-222ENST00000635152 STT3AP46977 705 aa12.76□□□□□ -0.37
BRF1-222ENST00000635152 SLC7A9P82251 487 aa12.76□□□□□ -0.37
BRF1-222ENST00000635152 DDX39BQ13838 428 aaKnown RBP12.76□□□□□ -0.37
BRF1-222ENST00000635152 RAB39AQ14964 217 aa12.76□□□□□ -0.37
BRF1-222ENST00000635152 RUNDC3AQ59EK9 446 aa12.76□□□□□ -0.37
BRF1-222ENST00000635152 MPP7Q5T2T1 576 aa12.76□□□□□ -0.37
BRF1-222ENST00000635152 USP51Q70EK9 711 aa12.76□□□□□ -0.37
BRF1-222ENST00000635152 ANKRD33Q7Z3H0 272 aa12.76□□□□□ -0.37
BRF1-222ENST00000635152 NECAB2Q7Z6G3 386 aa12.76□□□□□ -0.37
BRF1-222ENST00000635152 SORCS1Q8WY21 1168 aa12.76□□□□□ -0.37
BRF1-222ENST00000635152 SGCDQ92629 289 aa12.76□□□□□ -0.37
BRF1-222ENST00000635152 FOXJ1Q92949 421 aa12.76□□□□□ -0.37
BRF1-222ENST00000635152 FAM120BQ96EK7 910 aaKnown RBP12.76□□□□□ -0.37
BRF1-222ENST00000635152 TOR3AQ9H497 397 aa12.76□□□□□ -0.37
BRF1-222ENST00000635152 KAT8Q9H7Z6 458 aaKnown RBP12.76□□□□□ -0.37
BRF1-222ENST00000635152 PRAMEF4O60810 478 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 E2F6O75461 281 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 SERPINA1P01009 418 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 IL7RP16871 459 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 LAG3P18627 525 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 AOAHP28039 575 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 POLR2IP36954 125 aaKnown RBP12.75□□□□□ -0.37
BRF1-222ENST00000635152 SPINT3P49223 89 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 TPD52P55327 224 aaPredicted RBP12.75□□□□□ -0.37
BRF1-222ENST00000635152 SF1Q15637 639 aaKnown RBP12.75□□□□□ -0.37
BRF1-222ENST00000635152 PRAMEF9Q5VWM5 478 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 ZBTB46Q86UZ6 589 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 NAT16Q8N8M0 369 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 ECHDC3Q96DC8 303 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 MTG2Q9H4K7 406 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 GPRC5BQ9NZH0 403 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 CREG1O75629 220 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 ATP1B2P14415 290 aaPredicted RBP12.75□□□□□ -0.37
BRF1-222ENST00000635152 EFNA1P20827 205 aaPredicted RBP12.75□□□□□ -0.37
BRF1-222ENST00000635152 PIGAP37287 484 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 VAC14Q08AM6 782 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 LAPTM4AQ15012 233 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 PON2Q15165 354 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 LRRC23Q53EV4 343 aaPredicted RBP12.75□□□□□ -0.37
BRF1-222ENST00000635152 CARD16Q5EG05 197 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 CCNYL2Q5T2Q4 361 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 OR4F3Q6IEY1 312 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 TMEM26Q6ZUK4 368 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 Q6ZVL8 140 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 MICU2Q8IYU8 434 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 ELMO1Q92556 727 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 TCEAL4Q96EI5 215 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 CCDC115Q96NT0 180 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 SLC12A9Q9BXP2 914 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 PAIP1Q9H074 479 aaKnown RBP12.75□□□□□ -0.37
BRF1-222ENST00000635152 SERHLQ9NQF3 203 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 PAK6Q9NQU5 681 aaPredicted RBP12.75□□□□□ -0.37
BRF1-222ENST00000635152 ATXN10Q9UBB4 475 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 SLC25A13Q9UJS0 675 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 PPT2Q9UMR5 302 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 SNX6Q9UNH7 406 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 HS3ST2Q9Y278 367 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 FGF18O76093 207 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 POP4O95707 220 aaKnown RBP12.75□□□□□ -0.37
BRF1-222ENST00000635152 CBSLP0DN79 551 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 CSF2RAP15509 400 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 SDC1P18827 310 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 CBSP35520 551 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 HTRA3P83110 453 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 SLC14A1Q13336 389 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 SPIDRQ14159 915 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 GALNT10Q86SR1 603 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 METTL3Q86U44 580 aaKnown RBP12.75□□□□□ -0.37
BRF1-222ENST00000635152 GPR180Q86V85 440 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 AADATQ8N5Z0 425 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 GAB3Q8WWW8 586 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 ASB11Q8WXH4 323 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 SH3GL1Q99961 368 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 LINC00597Q9H2U6 94 aa12.75□□□□□ -0.37
BRF1-222ENST00000635152 ZNF510Q9Y2H8 683 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms