RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 GDI1P31150 447 aa21.46■■□□□ 1.03
PNKP-220ENST00000627232 CKAP5Q14008 2032 aa21.46■■□□□ 1.03
PNKP-220ENST00000627232 USP39Q53GS9 565 aaKnown RBP21.46■■□□□ 1.03
PNKP-220ENST00000627232 PIP5KL1Q5T9C9 394 aa21.46■■□□□ 1.03
PNKP-220ENST00000627232 LCN8Q6JVE9 175 aa21.46■■□□□ 1.03
PNKP-220ENST00000627232 HID1Q8IV36 788 aa21.46■■□□□ 1.03
PNKP-220ENST00000627232 LIX1Q8N485 282 aa21.46■■□□□ 1.03
PNKP-220ENST00000627232 LILRA3Q8N6C8 439 aaPredicted RBP21.46■■□□□ 1.03
PNKP-220ENST00000627232 OR56A3Q8NH54 315 aa21.46■■□□□ 1.03
PNKP-220ENST00000627232 CMTM7Q96FZ5 175 aa21.46■■□□□ 1.03
PNKP-220ENST00000627232 EFHD1Q9BUP0 239 aa21.46■■□□□ 1.03
PNKP-220ENST00000627232 DPY30Q9C005 99 aa21.46■■□□□ 1.03
PNKP-220ENST00000627232 COPS7BQ9H9Q2 264 aaPredicted RBP21.46■■□□□ 1.03
PNKP-220ENST00000627232 ACTR3BQ9P1U1 418 aa21.46■■□□□ 1.03
PNKP-220ENST00000627232 ATXN10Q9UBB4 475 aa21.46■■□□□ 1.03
PNKP-220ENST00000627232 TMED5Q9Y3A6 229 aa21.46■■□□□ 1.03
PNKP-220ENST00000627232 STON1Q9Y6Q2 735 aa21.46■■□□□ 1.03
PNKP-220ENST00000627232 PRAMEF4O60810 478 aa21.45■■□□□ 1.02
PNKP-220ENST00000627232 DNAJA2O60884 412 aa21.45■■□□□ 1.02
PNKP-220ENST00000627232 HALP42357 657 aa21.45■■□□□ 1.02
PNKP-220ENST00000627232 CLNS1AP54105 237 aaKnown RBP21.45■■□□□ 1.02
PNKP-220ENST00000627232 PWP1Q13610 501 aa21.45■■□□□ 1.02
PNKP-220ENST00000627232 SFT2D3Q587I9 215 aa21.45■■□□□ 1.02
PNKP-220ENST00000627232 HABP4Q5JVS0 413 aaKnown RBP21.45■■□□□ 1.02
PNKP-220ENST00000627232 PRAMEF9Q5VWM5 478 aa21.45■■□□□ 1.02
PNKP-220ENST00000627232 FRG2Q64ET8 278 aa21.45■■□□□ 1.02
PNKP-220ENST00000627232 NANOGP8Q6NSW7 305 aa21.45■■□□□ 1.02
PNKP-220ENST00000627232 CES5AQ6NT32 575 aa21.45■■□□□ 1.02
PNKP-220ENST00000627232 SLC2A7Q6PXP3 512 aa21.45■■□□□ 1.02
PNKP-220ENST00000627232 ADAMTSL4Q6UY14 1074 aa21.45■■□□□ 1.02
PNKP-220ENST00000627232 TRIM74Q86UV6 250 aa21.45■■□□□ 1.02
PNKP-220ENST00000627232 PTRH1Q86Y79 214 aaKnown RBP21.45■■□□□ 1.02
PNKP-220ENST00000627232 TRAPPC5Q8IUR0 188 aa21.45■■□□□ 1.02
PNKP-220ENST00000627232 KIAA2013Q8IYS2 634 aa21.45■■□□□ 1.02
PNKP-220ENST00000627232 DNAJB14Q8TBM8 379 aa21.45■■□□□ 1.02
PNKP-220ENST00000627232 MTFMTQ96DP5 389 aaKnown RBP21.45■■□□□ 1.02
PNKP-220ENST00000627232 HIC2Q96JB3 615 aa21.45■■□□□ 1.02
PNKP-220ENST00000627232 FRG2BQ96QU4 278 aa21.45■■□□□ 1.02
PNKP-220ENST00000627232 PKP4Q99569 1192 aa21.45■■□□□ 1.02
PNKP-220ENST00000627232 PKP2Q99959 881 aa21.45■■□□□ 1.02
PNKP-220ENST00000627232 RSPH9Q9H1X1 276 aaPredicted RBP21.45■■□□□ 1.02
PNKP-220ENST00000627232 NANOGQ9H9S0 305 aa21.45■■□□□ 1.02
PNKP-220ENST00000627232 GULP1Q9UBP9 304 aa21.45■■□□□ 1.02
PNKP-220ENST00000627232 DTNAQ9Y4J8 743 aa21.45■■□□□ 1.02
PNKP-220ENST00000627232 IL6P05231 212 aa21.45■■□□□ 1.02
PNKP-220ENST00000627232 PDHA2P29803 388 aa21.45■■□□□ 1.02
PNKP-220ENST00000627232 BDKRB1P46663 353 aa21.45■■□□□ 1.02
PNKP-220ENST00000627232 GSK3BP49841 420 aa21.45■■□□□ 1.02
PNKP-220ENST00000627232 IRF8Q02556 426 aa21.45■■□□□ 1.02
PNKP-220ENST00000627232 KLC1Q07866 573 aa21.45■■□□□ 1.02
PNKP-220ENST00000627232 CSTF3Q12996 717 aaKnown RBP21.45■■□□□ 1.02
PNKP-220ENST00000627232 ADAM15Q13444 863 aa21.45■■□□□ 1.02
PNKP-220ENST00000627232 CAMK2GQ13555 558 aaPredicted RBP21.45■■□□□ 1.02
PNKP-220ENST00000627232 BLMHQ13867 455 aa21.45■■□□□ 1.02
PNKP-220ENST00000627232 DLEU7Q6UYE1 221 aa21.45■■□□□ 1.02
PNKP-220ENST00000627232 LILRA2Q8N149 483 aa21.45■■□□□ 1.02
PNKP-220ENST00000627232 TMEM102Q8N9M5 508 aaPredicted RBP21.45■■□□□ 1.02
PNKP-220ENST00000627232 HM13Q8TCT9 377 aa21.45■■□□□ 1.02
PNKP-220ENST00000627232 COX14Q96I36 57 aa21.45■■□□□ 1.02
PNKP-220ENST00000627232 BTBD9Q96Q07 612 aa21.45■■□□□ 1.02
PNKP-220ENST00000627232 UHRF1Q96T88 793 aaPredicted RBP21.45■■□□□ 1.02
PNKP-220ENST00000627232 TRMT61BQ9BVS5 477 aaKnown RBP21.45■■□□□ 1.02
PNKP-220ENST00000627232 ALG2Q9H553 416 aa21.45■■□□□ 1.02
PNKP-220ENST00000627232 CLMPQ9H6B4 373 aa21.45■■□□□ 1.02
PNKP-220ENST00000627232 INTS7Q9NVH2 962 aaKnown RBP21.45■■□□□ 1.02
PNKP-220ENST00000627232 CLGNO14967 610 aa21.44■■□□□ 1.02
PNKP-220ENST00000627232 RNASEH2AO75792 299 aaKnown RBP21.44■■□□□ 1.02
PNKP-220ENST00000627232 C1orf105O95561 183 aa21.44■■□□□ 1.02
PNKP-220ENST00000627232 BCKDHAP12694 445 aa21.44■■□□□ 1.02
PNKP-220ENST00000627232 ATP6V1B2P21281 511 aa21.44■■□□□ 1.02
PNKP-220ENST00000627232 IMPA1P29218 277 aa21.44■■□□□ 1.02
PNKP-220ENST00000627232 HNF4AP41235 474 aa21.44■■□□□ 1.02
PNKP-220ENST00000627232 CASP2P42575 452 aa21.44■■□□□ 1.02
PNKP-220ENST00000627232 LIPEQ05469 1076 aa21.44■■□□□ 1.02
PNKP-220ENST00000627232 NAE1Q13564 534 aa21.44■■□□□ 1.02
PNKP-220ENST00000627232 LRRC36Q1X8D7 754 aa21.44■■□□□ 1.02
PNKP-220ENST00000627232 GRAMD1BQ3KR37 738 aa21.44■■□□□ 1.02
PNKP-220ENST00000627232 PARM1Q6UWI2 310 aa21.44■■□□□ 1.02
PNKP-220ENST00000627232 SUSD1Q6UWL2 747 aa21.44■■□□□ 1.02
PNKP-220ENST00000627232 TICAM1Q8IUC6 712 aa21.44■■□□□ 1.02
PNKP-220ENST00000627232 CFAP206Q8IYR0 622 aa21.44■■□□□ 1.02
PNKP-220ENST00000627232 OR2L2Q8NH16 312 aa21.44■■□□□ 1.02
PNKP-220ENST00000627232 SLC13A3Q8WWT9 602 aa21.44■■□□□ 1.02
PNKP-220ENST00000627232 NR1H4Q96RI1 486 aaPredicted RBP21.44■■□□□ 1.02
PNKP-220ENST00000627232 S1PR5Q9H228 398 aa21.44■■□□□ 1.02
PNKP-220ENST00000627232 DPEP2Q9H4A9 486 aa21.44■■□□□ 1.02
PNKP-220ENST00000627232 GPRC5BQ9NZH0 403 aa21.44■■□□□ 1.02
PNKP-220ENST00000627232 GMPR2Q9P2T1 348 aaKnown RBP21.44■■□□□ 1.02
PNKP-220ENST00000627232 CHD7Q9P2D1 2997 aa21.43■■□□□ 1.02
PNKP-220ENST00000627232 KRT87PA6NCN2 255 aa21.43■■□□□ 1.02
PNKP-220ENST00000627232 RNASEH1O60930 286 aaKnown RBP21.43■■□□□ 1.02
PNKP-220ENST00000627232 KCNH1O95259 989 aa21.43■■□□□ 1.02
PNKP-220ENST00000627232 ADH1BP00325 375 aa21.43■■□□□ 1.02
PNKP-220ENST00000627232 DRD3P35462 400 aa21.43■■□□□ 1.02
PNKP-220ENST00000627232 TNFRSF4P43489 277 aa21.43■■□□□ 1.02
PNKP-220ENST00000627232 DGKQP52824 942 aa21.43■■□□□ 1.02
PNKP-220ENST00000627232 CLDN8P56748 225 aa21.43■■□□□ 1.02
PNKP-220ENST00000627232 RPS14P62263 151 aaKnown RBP21.43■■□□□ 1.02
PNKP-220ENST00000627232 MRPS35P82673 323 aaKnown RBP21.43■■□□□ 1.02
PNKP-220ENST00000627232 PTGR1Q14914 329 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms