RNA–Protein interactions for RNA: ENST00000626874.2

CHD2-208, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 7,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-208ENST00000626874 ROPN1LQ96C74 230 aa6.78□□□□□ -1.32
CHD2-208ENST00000626874 ERLEC1Q96DZ1 483 aa6.78□□□□□ -1.32
CHD2-208ENST00000626874 CCDC115Q96NT0 180 aa6.78□□□□□ -1.32
CHD2-208ENST00000626874 NDNQ99608 321 aa6.78□□□□□ -1.32
CHD2-208ENST00000626874 CDCA3Q99618 268 aaPredicted RBP6.78□□□□□ -1.32
CHD2-208ENST00000626874 PPP1R14DQ9NXH3 145 aa6.78□□□□□ -1.32
CHD2-208ENST00000626874 ZNF670-ZNF695F2Z2N8 137 aa6.78□□□□□ -1.32
CHD2-208ENST00000626874 SLC22A2O15244 555 aa6.78□□□□□ -1.32
CHD2-208ENST00000626874 AP5Z1O43299 807 aa6.78□□□□□ -1.32
CHD2-208ENST00000626874 TSPAN9O75954 239 aa6.78□□□□□ -1.32
CHD2-208ENST00000626874 C9P02748 559 aa6.78□□□□□ -1.32
CHD2-208ENST00000626874 LINC00032P0C843 101 aa6.78□□□□□ -1.32
CHD2-208ENST00000626874 SPATA31D3P0C874 917 aa6.78□□□□□ -1.32
CHD2-208ENST00000626874 SRCP12931 536 aa6.78□□□□□ -1.32
CHD2-208ENST00000626874 CD47Q08722 323 aa6.78□□□□□ -1.32
CHD2-208ENST00000626874 HNRNPDQ14103 355 aaKnown RBP6.78□□□□□ -1.32
CHD2-208ENST00000626874 SPATA31D4Q6ZUB0 917 aa6.78□□□□□ -1.32
CHD2-208ENST00000626874 RAB43Q86YS6 212 aa6.78□□□□□ -1.32
CHD2-208ENST00000626874 MMAAQ8IVH4 418 aaKnown RBP6.78□□□□□ -1.32
CHD2-208ENST00000626874 PROKR2Q8NFJ6 384 aa6.78□□□□□ -1.32
CHD2-208ENST00000626874 DAZLQ92904 295 aaKnown RBP6.78□□□□□ -1.32
CHD2-208ENST00000626874 MR1Q95460 341 aa6.78□□□□□ -1.32
CHD2-208ENST00000626874 FKBP10Q96AY3 582 aa6.78□□□□□ -1.32
CHD2-208ENST00000626874 KLRG1Q96E93 195 aa6.78□□□□□ -1.32
CHD2-208ENST00000626874 EXOC2Q96KP1 924 aa6.78□□□□□ -1.32
CHD2-208ENST00000626874 AMDHD1Q96NU7 426 aa6.78□□□□□ -1.32
CHD2-208ENST00000626874 KCNMB3Q9NPA1 279 aa6.78□□□□□ -1.32
CHD2-208ENST00000626874 RIMBP3CA6NJZ7 1639 aa6.77□□□□□ -1.32
CHD2-208ENST00000626874 SRRM3A6NNA2 597 aaPredicted RBP6.77□□□□□ -1.32
CHD2-208ENST00000626874 RIMBP3BA6NNM3 1639 aa6.77□□□□□ -1.32
CHD2-208ENST00000626874 BCL9O00512 1426 aa6.77□□□□□ -1.32
CHD2-208ENST00000626874 NRP2O60462 931 aa6.77□□□□□ -1.32
CHD2-208ENST00000626874 ITGA5P08648 1049 aa6.77□□□□□ -1.32
CHD2-208ENST00000626874 EPCAMP16422 314 aa6.77□□□□□ -1.32
CHD2-208ENST00000626874 TCEA1P23193 301 aaKnown RBP6.77□□□□□ -1.32
CHD2-208ENST00000626874 WASP42768 502 aa6.77□□□□□ -1.32
CHD2-208ENST00000626874 CCR10P46092 362 aa6.77□□□□□ -1.32
CHD2-208ENST00000626874 SOX9P48436 509 aa6.77□□□□□ -1.32
CHD2-208ENST00000626874 NUMBP49757 651 aa6.77□□□□□ -1.32
CHD2-208ENST00000626874 NCBP2P52298 156 aaKnown RBP eCLIP6.77□□□□□ -1.32
CHD2-208ENST00000626874 CORO7P57737 925 aa6.77□□□□□ -1.32
CHD2-208ENST00000626874 TAS2R43P59537 309 aa6.77□□□□□ -1.32
CHD2-208ENST00000626874 ATP1A4Q13733 1029 aa6.77□□□□□ -1.32
CHD2-208ENST00000626874 TYSND1Q2T9J0 566 aa6.77□□□□□ -1.32
CHD2-208ENST00000626874 C15orf59Q2T9L4 293 aaPredicted RBP6.77□□□□□ -1.32
CHD2-208ENST00000626874 IFI44LQ53G44 452 aa6.77□□□□□ -1.32
CHD2-208ENST00000626874 RPL13AP3Q6NVV1 102 aa6.77□□□□□ -1.32
CHD2-208ENST00000626874 ZNF366Q8N895 744 aa6.77□□□□□ -1.32
CHD2-208ENST00000626874 GSTCDQ8NEC7 633 aa6.77□□□□□ -1.32
CHD2-208ENST00000626874 KLHL5Q96PQ7 755 aa6.77□□□□□ -1.32
CHD2-208ENST00000626874 DENND2DQ9H6A0 471 aaPredicted RBP6.77□□□□□ -1.32
CHD2-208ENST00000626874 LRRC19Q9H756 370 aa6.77□□□□□ -1.32
CHD2-208ENST00000626874 SNX15Q9NRS6 342 aa6.77□□□□□ -1.32
CHD2-208ENST00000626874 ZNF358Q9NW07 568 aa6.77□□□□□ -1.32
CHD2-208ENST00000626874 RIMBP3Q9UFD9 1639 aa6.77□□□□□ -1.32
CHD2-208ENST00000626874 MAP4K5Q9Y4K4 846 aa6.77□□□□□ -1.32
CHD2-208ENST00000626874 ZFP37Q9Y6Q3 630 aaPredicted RBP6.77□□□□□ -1.32
CHD2-208ENST00000626874 NCANO14594 1321 aa6.77□□□□□ -1.33
CHD2-208ENST00000626874 BTBD19C9JJ37 291 aa6.77□□□□□ -1.33
CHD2-208ENST00000626874 PSMD10O75832 226 aa6.77□□□□□ -1.33
CHD2-208ENST00000626874 AP2A1O95782 977 aa6.77□□□□□ -1.33
CHD2-208ENST00000626874 TNFRSF8P28908 595 aa6.77□□□□□ -1.33
CHD2-208ENST00000626874 SHMT2P34897 504 aa6.77□□□□□ -1.33
CHD2-208ENST00000626874 CLRN1P58418 232 aa6.77□□□□□ -1.33
CHD2-208ENST00000626874 RPL26P61254 145 aaKnown RBP6.77□□□□□ -1.33
CHD2-208ENST00000626874 DLG4P78352 724 aa6.77□□□□□ -1.33
CHD2-208ENST00000626874 ZNF234Q14588 700 aa6.77□□□□□ -1.33
CHD2-208ENST00000626874 TOR1AIP1Q5JTV8 583 aa6.77□□□□□ -1.33
CHD2-208ENST00000626874 MLIPQ5VWP3 458 aa6.77□□□□□ -1.33
CHD2-208ENST00000626874 PNPT1Q8TCS8 783 aaKnown RBP6.77□□□□□ -1.33
CHD2-208ENST00000626874 EPS8L1Q8TE68 723 aa6.77□□□□□ -1.33
CHD2-208ENST00000626874 NMD3Q96D46 503 aaKnown RBP6.77□□□□□ -1.33
CHD2-208ENST00000626874 KCNH6Q9H252 994 aa6.77□□□□□ -1.33
CHD2-208ENST00000626874 PTPRHQ9HD43 1115 aa6.77□□□□□ -1.33
CHD2-208ENST00000626874 EIF2B3Q9NR50 452 aaKnown RBP6.77□□□□□ -1.33
CHD2-208ENST00000626874 CIDEBQ9UHD4 219 aa6.77□□□□□ -1.33
CHD2-208ENST00000626874 EVLQ9UI08 416 aaPredicted RBP6.77□□□□□ -1.33
CHD2-208ENST00000626874 FKBP7Q9Y680 259 aa6.77□□□□□ -1.33
CHD2-208ENST00000626874 TREHO43280 583 aa6.77□□□□□ -1.33
CHD2-208ENST00000626874 HNRNPA1P09651 372 aaKnown RBP eCLIP6.77□□□□□ -1.33
CHD2-208ENST00000626874 ICAM3P32942 547 aa6.77□□□□□ -1.33
CHD2-208ENST00000626874 PLXDC1Q8IUK5 500 aa6.77□□□□□ -1.33
CHD2-208ENST00000626874 PPP1R35Q8TAP8 253 aa6.77□□□□□ -1.33
CHD2-208ENST00000626874 STK32AQ8WU08 396 aa6.77□□□□□ -1.33
CHD2-208ENST00000626874 TMCO6Q96DC7 493 aa6.77□□□□□ -1.33
CHD2-208ENST00000626874 APOLD1Q96LR9 279 aa6.77□□□□□ -1.33
CHD2-208ENST00000626874 MED28Q9H204 178 aa6.77□□□□□ -1.33
CHD2-208ENST00000626874 SEC14L4Q9UDX3 406 aa6.77□□□□□ -1.33
CHD2-208ENST00000626874 KCNN3Q9UGI6 736 aa6.77□□□□□ -1.33
CHD2-208ENST00000626874 SCML1Q9UN30 329 aa6.77□□□□□ -1.33
CHD2-208ENST00000626874 C2orf74A8MZ97 194 aa6.77□□□□□ -1.33
CHD2-208ENST00000626874 NT5C1B-RDH14C9J2C7 533 aa6.77□□□□□ -1.33
CHD2-208ENST00000626874 BCKDKO14874 412 aa6.77□□□□□ -1.33
CHD2-208ENST00000626874 CCL5P13501 91 aa6.77□□□□□ -1.33
CHD2-208ENST00000626874 TIE1P35590 1138 aa6.77□□□□□ -1.33
CHD2-208ENST00000626874 MC1RQ01726 317 aa6.77□□□□□ -1.33
CHD2-208ENST00000626874 CHAF1BQ13112 559 aa6.77□□□□□ -1.33
CHD2-208ENST00000626874 SSX6Q7RTT6 188 aa6.77□□□□□ -1.33
CHD2-208ENST00000626874 SERPINA9Q86WD7 417 aa6.77□□□□□ -1.33
CHD2-208ENST00000626874 REXO1L1PQ8IX06 675 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms