RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 RNF165Q6ZSG1 346 aa20.85■□□□□ 0.93
SPAST-204ENST00000621856 SYTL1Q8IYJ3 562 aa20.85■□□□□ 0.93
SPAST-204ENST00000621856 ULK2Q8IYT8 1036 aa20.85■□□□□ 0.93
SPAST-204ENST00000621856 OR56A3Q8NH54 315 aa20.85■□□□□ 0.93
SPAST-204ENST00000621856 MTFMTQ96DP5 389 aaKnown RBP20.85■□□□□ 0.93
SPAST-204ENST00000621856 CLPTM1LQ96KA5 538 aa20.85■□□□□ 0.93
SPAST-204ENST00000621856 PPP3R2Q96LZ3 170 aa20.85■□□□□ 0.93
SPAST-204ENST00000621856 NPAS2Q99743 824 aa20.85■□□□□ 0.93
SPAST-204ENST00000621856 SLC25A23Q9BV35 468 aa20.85■□□□□ 0.93
SPAST-204ENST00000621856 MRPL1Q9BYD6 325 aaKnown RBP20.85■□□□□ 0.93
SPAST-204ENST00000621856 RMI1Q9H9A7 625 aa20.85■□□□□ 0.93
SPAST-204ENST00000621856 IFRD1O00458 451 aaPredicted RBP20.84■□□□□ 0.93
SPAST-204ENST00000621856 CLGNO14967 610 aa20.84■□□□□ 0.93
SPAST-204ENST00000621856 CEACAM5P06731 702 aa20.84■□□□□ 0.93
SPAST-204ENST00000621856 RAP1GDS1P52306 607 aa20.84■□□□□ 0.93
SPAST-204ENST00000621856 RIPK1Q13546 671 aa20.84■□□□□ 0.93
SPAST-204ENST00000621856 METRNLQ641Q3 311 aa20.84■□□□□ 0.93
SPAST-204ENST00000621856 TRIM69Q86WT6 500 aa20.84■□□□□ 0.93
SPAST-204ENST00000621856 GALNT13Q8IUC8 556 aa20.84■□□□□ 0.93
SPAST-204ENST00000621856 DSELQ8IZU8 1212 aa20.84■□□□□ 0.93
SPAST-204ENST00000621856 L3MBTL4Q8NA19 623 aa20.84■□□□□ 0.93
SPAST-204ENST00000621856 TFGQ92734 400 aaPredicted RBP20.84■□□□□ 0.93
SPAST-204ENST00000621856 ELOVL6Q9H5J4 265 aa20.84■□□□□ 0.93
SPAST-204ENST00000621856 SDR39U1Q9NRG7 319 aaPredicted RBP20.84■□□□□ 0.93
SPAST-204ENST00000621856 SLC17A4Q9Y2C5 497 aa20.84■□□□□ 0.93
SPAST-204ENST00000621856 GPR45Q9Y5Y3 372 aa20.84■□□□□ 0.93
SPAST-204ENST00000621856 SPTBN5Q9NRC6 3674 aaKnown RBP20.84■□□□□ 0.93
SPAST-204ENST00000621856 KCNE1BA0A087WTH5 132 aa20.84■□□□□ 0.93
SPAST-204ENST00000621856 LSM1O15116 133 aaKnown RBP20.84■□□□□ 0.93
SPAST-204ENST00000621856 SLC35G4P0C7Q5 338 aa20.84■□□□□ 0.93
SPAST-204ENST00000621856 CHRNB1P11230 501 aa20.84■□□□□ 0.93
SPAST-204ENST00000621856 CLDN2P57739 230 aa20.84■□□□□ 0.93
SPAST-204ENST00000621856 TBL3Q12788 808 aaKnown RBP20.84■□□□□ 0.93
SPAST-204ENST00000621856 TSTA3Q13630 321 aaPredicted RBP20.84■□□□□ 0.93
SPAST-204ENST00000621856 AP5B1Q2VPB7 878 aa20.84■□□□□ 0.93
SPAST-204ENST00000621856 XKR6Q5GH73 641 aa20.84■□□□□ 0.93
SPAST-204ENST00000621856 WASHC2DQ5SRD0 308 aa20.84■□□□□ 0.93
SPAST-204ENST00000621856 PHC3Q8NDX5 983 aa20.84■□□□□ 0.93
SPAST-204ENST00000621856 DENND6BQ8NEG7 585 aa20.84■□□□□ 0.93
SPAST-204ENST00000621856 ZNF480Q8WV37 535 aa20.84■□□□□ 0.93
SPAST-204ENST00000621856 SELENOMQ8WWX9 145 aa20.84■□□□□ 0.93
SPAST-204ENST00000621856 USP7Q93009 1102 aa20.84■□□□□ 0.93
SPAST-204ENST00000621856 UHRF1Q96T88 793 aaPredicted RBP20.84■□□□□ 0.93
SPAST-204ENST00000621856 TIMM29Q9BSF4 260 aa20.84■□□□□ 0.93
SPAST-204ENST00000621856 OSGEPL1Q9H4B0 414 aa20.84■□□□□ 0.93
SPAST-204ENST00000621856 DENND2DQ9H6A0 471 aaPredicted RBP20.84■□□□□ 0.93
SPAST-204ENST00000621856 SGK2Q9HBY8 427 aa20.84■□□□□ 0.93
SPAST-204ENST00000621856 ITM2CQ9NQX7 267 aa20.84■□□□□ 0.93
SPAST-204ENST00000621856 NDE1Q9NXR1 346 aa20.84■□□□□ 0.93
SPAST-204ENST00000621856 EYSQ5T1H1 3165 aa20.83■□□□□ 0.93
SPAST-204ENST00000621856 NR5A2O00482 541 aa20.83■□□□□ 0.92
SPAST-204ENST00000621856 FPGTO14772 594 aa20.83■□□□□ 0.92
SPAST-204ENST00000621856 FUCA1P04066 466 aa20.83■□□□□ 0.92
SPAST-204ENST00000621856 RPN2P04844 631 aa20.83■□□□□ 0.92
SPAST-204ENST00000621856 DGKEP52429 567 aa20.83■□□□□ 0.92
SPAST-204ENST00000621856 SNCBQ16143 134 aa20.83■□□□□ 0.92
SPAST-204ENST00000621856 REP15Q6BDI9 236 aa20.83■□□□□ 0.92
SPAST-204ENST00000621856 CAPN13Q6MZZ7 669 aaPredicted RBP20.83■□□□□ 0.92
SPAST-204ENST00000621856 TRIM46Q7Z4K8 759 aa20.83■□□□□ 0.92
SPAST-204ENST00000621856 DCUN1D3Q8IWE4 304 aa20.83■□□□□ 0.92
SPAST-204ENST00000621856 OR5AR1Q8NGP9 310 aa20.83■□□□□ 0.92
SPAST-204ENST00000621856 RAD51AP1Q96B01 352 aa20.83■□□□□ 0.92
SPAST-204ENST00000621856 LMAN1LQ9HAT1 526 aa20.83■□□□□ 0.92
SPAST-204ENST00000621856 ACSL5Q9ULC5 683 aa20.83■□□□□ 0.92
SPAST-204ENST00000621856 SUFUQ9UMX1 484 aa20.83■□□□□ 0.92
SPAST-204ENST00000621856 TDRKHQ9Y2W6 561 aaKnown RBP20.83■□□□□ 0.92
SPAST-204ENST00000621856 GPSM3Q9Y4H4 160 aa20.83■□□□□ 0.92
SPAST-204ENST00000621856 A0A088AWK7 358 aa20.82■□□□□ 0.92
SPAST-204ENST00000621856 KANSL1LA0AUZ9 987 aa20.82■□□□□ 0.92
SPAST-204ENST00000621856 E7EQ34 232 aa20.82■□□□□ 0.92
SPAST-204ENST00000621856 UGDHO60701 494 aa20.82■□□□□ 0.92
SPAST-204ENST00000621856 PRAMEF4O60810 478 aa20.82■□□□□ 0.92
SPAST-204ENST00000621856 SEMA4FO95754 770 aa20.82■□□□□ 0.92
SPAST-204ENST00000621856 PDYNP01213 254 aa20.82■□□□□ 0.92
SPAST-204ENST00000621856 SLC2A4P14672 509 aa20.82■□□□□ 0.92
SPAST-204ENST00000621856 KELP23276 732 aa20.82■□□□□ 0.92
SPAST-204ENST00000621856 CLCNKAP51800 687 aa20.82■□□□□ 0.92
SPAST-204ENST00000621856 TBPL1P62380 186 aa20.82■□□□□ 0.92
SPAST-204ENST00000621856 HMGCS1Q01581 520 aa20.82■□□□□ 0.92
SPAST-204ENST00000621856 EMX2Q04743 252 aa20.82■□□□□ 0.92
SPAST-204ENST00000621856 DMPKQ09013 629 aa20.82■□□□□ 0.92
SPAST-204ENST00000621856 LRRC32Q14392 662 aa20.82■□□□□ 0.92
SPAST-204ENST00000621856 PDCD4Q53EL6 469 aaKnown RBP20.82■□□□□ 0.92
SPAST-204ENST00000621856 C6orf163Q5TEZ5 329 aa20.82■□□□□ 0.92
SPAST-204ENST00000621856 PRAMEF9Q5VWM5 478 aa20.82■□□□□ 0.92
SPAST-204ENST00000621856 LIPJQ5W064 366 aa20.82■□□□□ 0.92
SPAST-204ENST00000621856 FUNDC1Q8IVP5 155 aa20.82■□□□□ 0.92
SPAST-204ENST00000621856 OR4K3Q96R72 315 aa20.82■□□□□ 0.92
SPAST-204ENST00000621856 MRPL40Q9NQ50 206 aaKnown RBP20.82■□□□□ 0.92
SPAST-204ENST00000621856 EBF1Q9UH73 591 aa20.82■□□□□ 0.92
SPAST-204ENST00000621856 CCL27Q9Y4X3 112 aa20.82■□□□□ 0.92
SPAST-204ENST00000621856 POM121BA6NF01 834 aa20.81■□□□□ 0.92
SPAST-204ENST00000621856 WFS1O76024 890 aa20.81■□□□□ 0.92
SPAST-204ENST00000621856 JUPP14923 745 aa20.81■□□□□ 0.92
SPAST-204ENST00000621856 HNRNPA2B1P22626 353 aaKnown RBP20.81■□□□□ 0.92
SPAST-204ENST00000621856 RPL10P27635 214 aaKnown RBP20.81■□□□□ 0.92
SPAST-204ENST00000621856 GNPDA1P46926 289 aa20.81■□□□□ 0.92
SPAST-204ENST00000621856 MRPL19P49406 292 aaKnown RBP20.81■□□□□ 0.92
SPAST-204ENST00000621856 PNLIPRP1P54315 467 aa20.81■□□□□ 0.92
SPAST-204ENST00000621856 RPL38P63173 70 aaKnown RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms