RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 PIPSLA2A3N6 862 aa13.84□□□□□ -0.19
CBWD3-217ENST00000621474 GSAPA4D1B5 854 aa13.84□□□□□ -0.19
CBWD3-217ENST00000621474 SLC16A8O95907 504 aa13.84□□□□□ -0.19
CBWD3-217ENST00000621474 FGF3P11487 239 aaPredicted RBP13.84□□□□□ -0.19
CBWD3-217ENST00000621474 UGT2B7P16662 529 aa13.84□□□□□ -0.19
CBWD3-217ENST00000621474 STMN1P16949 149 aa13.84□□□□□ -0.19
CBWD3-217ENST00000621474 SEPHS1P49903 392 aa13.84□□□□□ -0.19
CBWD3-217ENST00000621474 RAB10P61026 200 aa13.84□□□□□ -0.19
CBWD3-217ENST00000621474 GABREP78334 506 aa13.84□□□□□ -0.19
CBWD3-217ENST00000621474 CYP2A13Q16696 494 aa13.84□□□□□ -0.19
CBWD3-217ENST00000621474 PPP1R3AQ16821 1122 aa13.84□□□□□ -0.19
CBWD3-217ENST00000621474 MROH9Q5TGP6 573 aa13.84□□□□□ -0.19
CBWD3-217ENST00000621474 CACHD1Q5VU97 1274 aa13.84□□□□□ -0.19
CBWD3-217ENST00000621474 SPESP1Q6UW49 350 aa13.84□□□□□ -0.19
CBWD3-217ENST00000621474 MBOAT1Q6ZNC8 495 aa13.84□□□□□ -0.19
CBWD3-217ENST00000621474 LRRC56Q8IYG6 542 aaPredicted RBP13.84□□□□□ -0.19
CBWD3-217ENST00000621474 SPATA6LQ8N4H0 392 aa13.84□□□□□ -0.19
CBWD3-217ENST00000621474 MDM1Q8TC05 714 aa13.84□□□□□ -0.19
CBWD3-217ENST00000621474 MAGEC3Q8TD91 643 aa13.84□□□□□ -0.19
CBWD3-217ENST00000621474 AENQ8WTP8 325 aaKnown RBP13.84□□□□□ -0.19
CBWD3-217ENST00000621474 SLC41A2Q96JW4 573 aa13.84□□□□□ -0.19
CBWD3-217ENST00000621474 CD180Q99467 661 aa13.84□□□□□ -0.19
CBWD3-217ENST00000621474 PARD6BQ9BYG5 372 aa13.84□□□□□ -0.19
CBWD3-217ENST00000621474 ASCL3Q9NQ33 180 aa13.84□□□□□ -0.19
CBWD3-217ENST00000621474 RRAGDQ9NQL2 400 aaPredicted RBP13.84□□□□□ -0.19
CBWD3-217ENST00000621474 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.84□□□□□ -0.19
CBWD3-217ENST00000621474 C2orf74A8MZ97 194 aa13.83□□□□□ -0.2
CBWD3-217ENST00000621474 CDC7O00311 574 aa13.83□□□□□ -0.2
CBWD3-217ENST00000621474 MATN2O00339 956 aa13.83□□□□□ -0.2
CBWD3-217ENST00000621474 ZBTB14O43829 449 aa13.83□□□□□ -0.2
CBWD3-217ENST00000621474 BRINP1O60477 761 aa13.83□□□□□ -0.2
CBWD3-217ENST00000621474 RASSF9O75901 435 aa13.83□□□□□ -0.2
CBWD3-217ENST00000621474 DXOO77932 396 aaKnown RBP13.83□□□□□ -0.2
CBWD3-217ENST00000621474 C8GP07360 202 aa13.83□□□□□ -0.2
CBWD3-217ENST00000621474 IMPA1P29218 277 aa13.83□□□□□ -0.2
CBWD3-217ENST00000621474 DLG1Q12959 904 aa13.83□□□□□ -0.2
CBWD3-217ENST00000621474 PRKAA1Q13131 559 aa13.83□□□□□ -0.2
CBWD3-217ENST00000621474 SP140Q13342 867 aa13.83□□□□□ -0.2
CBWD3-217ENST00000621474 TTC23LQ6PF05 361 aa13.83□□□□□ -0.2
CBWD3-217ENST00000621474 IGF2-ASQ6U949 168 aa13.83□□□□□ -0.2
CBWD3-217ENST00000621474 TAX1BP1Q86VP1 789 aa13.83□□□□□ -0.2
CBWD3-217ENST00000621474 FAM20CQ8IXL6 584 aa13.83□□□□□ -0.2
CBWD3-217ENST00000621474 FBXO39Q8N4B4 442 aa13.83□□□□□ -0.2
CBWD3-217ENST00000621474 NKAPQ8N5F7 415 aaKnown RBP13.83□□□□□ -0.2
CBWD3-217ENST00000621474 AGBL5Q8NDL9 886 aa13.83□□□□□ -0.2
CBWD3-217ENST00000621474 ZNF480Q8WV37 535 aa13.83□□□□□ -0.2
CBWD3-217ENST00000621474 ISL2Q96A47 359 aa13.83□□□□□ -0.2
CBWD3-217ENST00000621474 SLC46A1Q96NT5 459 aa13.83□□□□□ -0.2
CBWD3-217ENST00000621474 UNKQ9C0B0 810 aaKnown RBP13.83□□□□□ -0.2
CBWD3-217ENST00000621474 SYTL2Q9HCH5 934 aa13.83□□□□□ -0.2
CBWD3-217ENST00000621474 SPATA7Q9P0W8 599 aa13.83□□□□□ -0.2
CBWD3-217ENST00000621474 ZNF180Q9UJW8 692 aa13.83□□□□□ -0.2
CBWD3-217ENST00000621474 RAB21Q9UL25 225 aa13.83□□□□□ -0.2
CBWD3-217ENST00000621474 MAP1BP46821 2468 aaKnown RBP13.83□□□□□ -0.2
CBWD3-217ENST00000621474 EXOC1LA0A1B0GW35 172 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 CDRT15L2A8MXV6 281 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 E7ENX8 843 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 POC1B-GALNT4F8VUJ3 575 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 SLC16A5O15375 505 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 KDM1AO60341 852 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 PRAMEF10O60809 474 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 SHBGP04278 402 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 PVRP15151 417 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 ST6GAL1P15907 406 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 NELFEP18615 380 aaKnown RBP13.82□□□□□ -0.2
CBWD3-217ENST00000621474 PSMB5P28074 263 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 MAGEA12P43365 314 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 SLC12A2P55011 1212 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 YBX1P67809 324 aaKnown RBP13.82□□□□□ -0.2
CBWD3-217ENST00000621474 SH3BP2P78314 561 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 TAP2Q03519 686 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 KIR2DS3Q14952 304 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 ANKS6Q68DC2 871 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 ARMC6Q6NXE6 501 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 FOXR1Q6PIV2 292 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 UNQ6494/PRO21346Q6UXR6 183 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 TRIM73Q86UV7 250 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 PPFIBP2Q8ND30 876 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 ANKRD7Q92527 254 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 NXPE2Q96DL1 559 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 TSPAN17Q96FV3 270 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 RAB11FIP5Q9BXF6 653 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 DERL2Q9GZP9 239 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 PARVBQ9HBI1 364 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 SNX15Q9NRS6 342 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 C1GALT1Q9NS00 363 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 PISDQ9UG56 409 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 MDC1Q14676 2089 aaKnown RBP13.82□□□□□ -0.2
CBWD3-217ENST00000621474 NPEPPSL1A6NEC2 478 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 EFCAB7A8K855 629 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 INHBAP08476 426 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 CCDC166P0CW27 439 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 CD1DP15813 335 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 CSTF2P33240 577 aaKnown RBP eCLIP13.82□□□□□ -0.2
CBWD3-217ENST00000621474 IRF9Q00978 393 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 CYP4F3Q08477 520 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 KCNAB1Q14722 419 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 ARHGAP19Q14CB8 494 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 TSNQ15631 228 aaKnown RBP13.82□□□□□ -0.2
CBWD3-217ENST00000621474 ZIC1Q15915 447 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms