RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 EDEM1Q92611 657 aa13.27□□□□□ -0.28
PPP4R3B-205ENST00000616288 CIDECQ96AQ7 238 aaPredicted RBP13.27□□□□□ -0.28
PPP4R3B-205ENST00000616288 TEX12Q9BXU0 123 aa13.27□□□□□ -0.28
PPP4R3B-205ENST00000616288 RNF19AQ9NV58 838 aa13.27□□□□□ -0.28
PPP4R3B-205ENST00000616288 PIRTP0C851 137 aa13.27□□□□□ -0.28
PPP4R3B-205ENST00000616288 LCN1P31025 176 aa13.27□□□□□ -0.28
PPP4R3B-205ENST00000616288 FCGRTP55899 365 aa13.27□□□□□ -0.28
PPP4R3B-205ENST00000616288 LCP2Q13094 533 aa13.27□□□□□ -0.28
PPP4R3B-205ENST00000616288 PAGE3Q5JUK9 113 aa13.27□□□□□ -0.28
PPP4R3B-205ENST00000616288 HACD2Q6Y1H2 254 aa13.27□□□□□ -0.28
PPP4R3B-205ENST00000616288 ZFAND1Q8TCF1 268 aa13.27□□□□□ -0.28
PPP4R3B-205ENST00000616288 TBC1D17Q9HA65 648 aa13.27□□□□□ -0.28
PPP4R3B-205ENST00000616288 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.27□□□□□ -0.28
PPP4R3B-205ENST00000616288 PCDHB5Q9Y5E4 795 aa13.27□□□□□ -0.28
PPP4R3B-205ENST00000616288 FAM234BA2RU67 622 aa13.27□□□□□ -0.29
PPP4R3B-205ENST00000616288 FAM220BPB1ANY3 271 aa13.27□□□□□ -0.29
PPP4R3B-205ENST00000616288 ZNF250P15622 560 aa13.27□□□□□ -0.29
PPP4R3B-205ENST00000616288 DCTP40126 519 aa13.27□□□□□ -0.29
PPP4R3B-205ENST00000616288 CBX5P45973 191 aa13.27□□□□□ -0.29
PPP4R3B-205ENST00000616288 XAF1Q6GPH4 301 aa13.27□□□□□ -0.29
PPP4R3B-205ENST00000616288 CES5AQ6NT32 575 aa13.27□□□□□ -0.29
PPP4R3B-205ENST00000616288 B3GNT8Q7Z7M8 397 aa13.27□□□□□ -0.29
PPP4R3B-205ENST00000616288 LAPTM4BQ86VI4 370 aa13.27□□□□□ -0.29
PPP4R3B-205ENST00000616288 FTMTQ8N4E7 242 aa13.27□□□□□ -0.29
PPP4R3B-205ENST00000616288 SETD6Q8TBK2 473 aa13.27□□□□□ -0.29
PPP4R3B-205ENST00000616288 TEX47Q8TBZ9 253 aa13.27□□□□□ -0.29
PPP4R3B-205ENST00000616288 SLC13A3Q8WWT9 602 aa13.27□□□□□ -0.29
PPP4R3B-205ENST00000616288 NDRG1Q92597 394 aaKnown RBP13.27□□□□□ -0.29
PPP4R3B-205ENST00000616288 ART5Q96L15 291 aa13.27□□□□□ -0.29
PPP4R3B-205ENST00000616288 MEAF6Q9HAF1 191 aa13.27□□□□□ -0.29
PPP4R3B-205ENST00000616288 SPIN1Q9Y657 262 aaPredicted RBP13.27□□□□□ -0.29
PPP4R3B-205ENST00000616288 DCCP43146 1447 aa13.27□□□□□ -0.29
PPP4R3B-205ENST00000616288 LOC102723532A0A0G2JNH3 316 aa13.27□□□□□ -0.29
PPP4R3B-205ENST00000616288 SH3D21A4FU49 640 aa13.27□□□□□ -0.29
PPP4R3B-205ENST00000616288 WASHC1A8K0Z3 465 aa13.27□□□□□ -0.29
PPP4R3B-205ENST00000616288 FABP7O15540 132 aa13.27□□□□□ -0.29
PPP4R3B-205ENST00000616288 ENPP1P22413 925 aa13.27□□□□□ -0.29
PPP4R3B-205ENST00000616288 TGFBR2P37173 567 aa13.27□□□□□ -0.29
PPP4R3B-205ENST00000616288 STXBP2Q15833 593 aa13.27□□□□□ -0.29
PPP4R3B-205ENST00000616288 PTRHD1Q6GMV3 140 aaKnown RBP13.27□□□□□ -0.29
PPP4R3B-205ENST00000616288 CRTC1Q6UUV9 634 aa13.27□□□□□ -0.29
PPP4R3B-205ENST00000616288 C15orf52Q6ZUT6 534 aaKnown RBP13.27□□□□□ -0.29
PPP4R3B-205ENST00000616288 CDK15Q96Q40 435 aa13.27□□□□□ -0.29
PPP4R3B-205ENST00000616288 TTPALQ9BTX7 342 aa13.27□□□□□ -0.29
PPP4R3B-205ENST00000616288 C11orf16Q9NQ32 467 aa13.27□□□□□ -0.29
PPP4R3B-205ENST00000616288 NANSQ9NR45 359 aa13.27□□□□□ -0.29
PPP4R3B-205ENST00000616288 SLC39A1Q9NY26 324 aa13.27□□□□□ -0.29
PPP4R3B-205ENST00000616288 ACTR10Q9NZ32 417 aa13.27□□□□□ -0.29
PPP4R3B-205ENST00000616288 ALG5Q9Y673 324 aa13.27□□□□□ -0.29
PPP4R3B-205ENST00000616288 A0A1W2PQL4 384 aaPredicted RBP13.26□□□□□ -0.29
PPP4R3B-205ENST00000616288 CREG1O75629 220 aa13.26□□□□□ -0.29
PPP4R3B-205ENST00000616288 PVALBP20472 110 aaPredicted RBP13.26□□□□□ -0.29
PPP4R3B-205ENST00000616288 HTR1EP28566 365 aa13.26□□□□□ -0.29
PPP4R3B-205ENST00000616288 SMSP52788 366 aa13.26□□□□□ -0.29
PPP4R3B-205ENST00000616288 HERVK_113P63132 956 aa13.26□□□□□ -0.29
PPP4R3B-205ENST00000616288 MPP7Q5T2T1 576 aa13.26□□□□□ -0.29
PPP4R3B-205ENST00000616288 C10orf62Q5T681 223 aaPredicted RBP13.26□□□□□ -0.29
PPP4R3B-205ENST00000616288 ANKRD34AQ69YU3 496 aa13.26□□□□□ -0.29
PPP4R3B-205ENST00000616288 PDE12Q6L8Q7 609 aaKnown RBP13.26□□□□□ -0.29
PPP4R3B-205ENST00000616288 C17orf107Q6ZR85 190 aa13.26□□□□□ -0.29
PPP4R3B-205ENST00000616288 CEP97Q8IW35 865 aa13.26□□□□□ -0.29
PPP4R3B-205ENST00000616288 FBXW5Q969U6 566 aa13.26□□□□□ -0.29
PPP4R3B-205ENST00000616288 TMEM125Q96AQ2 219 aa13.26□□□□□ -0.29
PPP4R3B-205ENST00000616288 PANX1Q96RD7 426 aa13.26□□□□□ -0.29
PPP4R3B-205ENST00000616288 PARK7Q99497 189 aaKnown RBP13.26□□□□□ -0.29
PPP4R3B-205ENST00000616288 CDV3Q9UKY7 258 aaKnown RBP13.26□□□□□ -0.29
PPP4R3B-205ENST00000616288 LRRC14BA6NHZ5 514 aa13.26□□□□□ -0.29
PPP4R3B-205ENST00000616288 SUV39H1O43463 412 aa13.26□□□□□ -0.29
PPP4R3B-205ENST00000616288 RGS14O43566 566 aa13.26□□□□□ -0.29
PPP4R3B-205ENST00000616288 MLYCDO95822 493 aa13.26□□□□□ -0.29
PPP4R3B-205ENST00000616288 CDH12P55289 794 aa13.26□□□□□ -0.29
PPP4R3B-205ENST00000616288 SLC39A4Q6P5W5 647 aa13.26□□□□□ -0.29
PPP4R3B-205ENST00000616288 ELOVL4Q9GZR5 314 aa13.26□□□□□ -0.29
PPP4R3B-205ENST00000616288 PDGFCQ9NRA1 345 aa13.26□□□□□ -0.29
PPP4R3B-205ENST00000616288 SLAMF8Q9P0V8 285 aa13.26□□□□□ -0.29
PPP4R3B-205ENST00000616288 CD300AQ9UGN4 299 aa13.26□□□□□ -0.29
PPP4R3B-205ENST00000616288 GMEB2Q9UKD1 530 aa13.26□□□□□ -0.29
PPP4R3B-205ENST00000616288 PTPRJQ12913 1337 aa13.26□□□□□ -0.29
PPP4R3B-205ENST00000616288 LYPLA2O95372 231 aa13.26□□□□□ -0.29
PPP4R3B-205ENST00000616288 EFNA1P20827 205 aaPredicted RBP13.26□□□□□ -0.29
PPP4R3B-205ENST00000616288 DNAJA1P31689 397 aaKnown RBP13.26□□□□□ -0.29
PPP4R3B-205ENST00000616288 MAN2A2P49641 1150 aa13.26□□□□□ -0.29
PPP4R3B-205ENST00000616288 TARDBPQ13148 414 aaKnown RBP eCLIP13.26□□□□□ -0.29
PPP4R3B-205ENST00000616288 KCNA10Q16322 511 aa13.26□□□□□ -0.29
PPP4R3B-205ENST00000616288 CTU2Q2VPK5 515 aaKnown RBP13.26□□□□□ -0.29
PPP4R3B-205ENST00000616288 PMF1Q6P1K2 205 aa13.26□□□□□ -0.29
PPP4R3B-205ENST00000616288 CYP4Z1Q86W10 505 aa13.26□□□□□ -0.29
PPP4R3B-205ENST00000616288 DENND1CQ8IV53 801 aa13.26□□□□□ -0.29
PPP4R3B-205ENST00000616288 NLNQ9BYT8 704 aa13.26□□□□□ -0.29
PPP4R3B-205ENST00000616288 SH3BP4Q9P0V3 963 aa13.26□□□□□ -0.29
PPP4R3B-205ENST00000616288 RIMBP3CA6NJZ7 1639 aa13.26□□□□□ -0.29
PPP4R3B-205ENST00000616288 RIMBP3BA6NNM3 1639 aa13.26□□□□□ -0.29
PPP4R3B-205ENST00000616288 RIMBP3Q9UFD9 1639 aa13.26□□□□□ -0.29
PPP4R3B-205ENST00000616288 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.25□□□□□ -0.29
PPP4R3B-205ENST00000616288 LOC105369274A0A096LPK9 316 aa13.25□□□□□ -0.29
PPP4R3B-205ENST00000616288 YDJCA8MPS7 323 aa13.25□□□□□ -0.29
PPP4R3B-205ENST00000616288 PAHP00439 452 aa13.25□□□□□ -0.29
PPP4R3B-205ENST00000616288 ADORA3P0DMS8 318 aa13.25□□□□□ -0.29
PPP4R3B-205ENST00000616288 PTPN3P26045 913 aa13.25□□□□□ -0.29
PPP4R3B-205ENST00000616288 GPC1P35052 558 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms