RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 E2F3O00716 465 aa13.37□□□□□ -0.27
TMEM254-213ENST00000613758 IMPA1P29218 277 aa13.37□□□□□ -0.27
TMEM254-213ENST00000613758 HNRNPKP61978 463 aaKnown RBP eCLIP13.37□□□□□ -0.27
TMEM254-213ENST00000613758 GRB7Q14451 532 aa13.37□□□□□ -0.27
TMEM254-213ENST00000613758 METTL2BQ6P1Q9 378 aaKnown RBP13.37□□□□□ -0.27
TMEM254-213ENST00000613758 ALYREFQ86V81 257 aaKnown RBP13.37□□□□□ -0.27
TMEM254-213ENST00000613758 TEX9Q8N6V9 391 aa13.37□□□□□ -0.27
TMEM254-213ENST00000613758 TRPC4APQ8TEL6 797 aa13.37□□□□□ -0.27
TMEM254-213ENST00000613758 CAMK1GQ96NX5 476 aa13.37□□□□□ -0.27
TMEM254-213ENST00000613758 HGH1Q9BTY7 390 aa13.37□□□□□ -0.27
TMEM254-213ENST00000613758 ILKAPQ9H0C8 392 aaPredicted RBP13.37□□□□□ -0.27
TMEM254-213ENST00000613758 ACTR5Q9H9F9 607 aaPredicted RBP13.37□□□□□ -0.27
TMEM254-213ENST00000613758 ERVMER34-1Q9H9K5 563 aa13.37□□□□□ -0.27
TMEM254-213ENST00000613758 EML4Q9HC35 981 aaKnown RBP13.37□□□□□ -0.27
TMEM254-213ENST00000613758 ZNF624Q9P2J8 865 aaPredicted RBP13.37□□□□□ -0.27
TMEM254-213ENST00000613758 OPTCQ9UBM4 332 aa13.37□□□□□ -0.27
TMEM254-213ENST00000613758 SPASTQ9UBP0 616 aa13.37□□□□□ -0.27
TMEM254-213ENST00000613758 POLG2Q9UHN1 485 aa13.37□□□□□ -0.27
TMEM254-213ENST00000613758 PRDM4Q9UKN5 801 aa13.37□□□□□ -0.27
TMEM254-213ENST00000613758 PLAGL1Q9UM63 463 aa13.37□□□□□ -0.27
TMEM254-213ENST00000613758 COLEC10Q9Y6Z7 277 aa13.37□□□□□ -0.27
TMEM254-213ENST00000613758 MUC3AQ02505 3323 aa13.37□□□□□ -0.27
TMEM254-213ENST00000613758 ZFC3H1O60293 1989 aaKnown RBP13.37□□□□□ -0.27
TMEM254-213ENST00000613758 SNUPNO95149 360 aaKnown RBP13.37□□□□□ -0.27
TMEM254-213ENST00000613758 CTSKP43235 329 aa13.37□□□□□ -0.27
TMEM254-213ENST00000613758 BNC1Q01954 994 aa13.37□□□□□ -0.27
TMEM254-213ENST00000613758 ACTN3Q08043 901 aaPredicted RBP13.37□□□□□ -0.27
TMEM254-213ENST00000613758 PTCHD3Q3KNS1 767 aa13.37□□□□□ -0.27
TMEM254-213ENST00000613758 SPDYAQ5MJ70 313 aa13.37□□□□□ -0.27
TMEM254-213ENST00000613758 IYDQ6PHW0 289 aa13.37□□□□□ -0.27
TMEM254-213ENST00000613758 CLNKQ7Z7G1 428 aa13.37□□□□□ -0.27
TMEM254-213ENST00000613758 ZNF480Q8WV37 535 aa13.37□□□□□ -0.27
TMEM254-213ENST00000613758 COL25A1Q9BXS0 654 aaPredicted RBP13.37□□□□□ -0.27
TMEM254-213ENST00000613758 ZBTB26Q9HCK0 441 aa13.37□□□□□ -0.27
TMEM254-213ENST00000613758 SEMA4BQ9NPR2 832 aaPredicted RBP13.37□□□□□ -0.27
TMEM254-213ENST00000613758 ZFP69BQ9UJL9 534 aa13.37□□□□□ -0.27
TMEM254-213ENST00000613758 ANGPTL3Q9Y5C1 460 aa13.37□□□□□ -0.27
TMEM254-213ENST00000613758 KNL1Q8NG31 2342 aa13.36□□□□□ -0.27
TMEM254-213ENST00000613758 PRAMEF33A0A0G2JMD5 474 aa13.36□□□□□ -0.27
TMEM254-213ENST00000613758 K7EPI3 171 aa13.36□□□□□ -0.27
TMEM254-213ENST00000613758 PPP6CO00743 305 aa13.36□□□□□ -0.27
TMEM254-213ENST00000613758 UBFD1O14562 309 aaKnown RBP13.36□□□□□ -0.27
TMEM254-213ENST00000613758 T-ENOLP0DO92 83 aa13.36□□□□□ -0.27
TMEM254-213ENST00000613758 SLC6A12P48065 614 aa13.36□□□□□ -0.27
TMEM254-213ENST00000613758 IDH3AP50213 366 aa13.36□□□□□ -0.27
TMEM254-213ENST00000613758 NUBP1P53384 320 aa13.36□□□□□ -0.27
TMEM254-213ENST00000613758 NCALDP61601 193 aa13.36□□□□□ -0.27
TMEM254-213ENST00000613758 GALNT1Q10472 559 aaPredicted RBP13.36□□□□□ -0.27
TMEM254-213ENST00000613758 PRKAA1Q13131 559 aa13.36□□□□□ -0.27
TMEM254-213ENST00000613758 NAE1Q13564 534 aa13.36□□□□□ -0.27
TMEM254-213ENST00000613758 GTF2H2Q13888 395 aa13.36□□□□□ -0.27
TMEM254-213ENST00000613758 VWA5B1Q5TIE3 1220 aa13.36□□□□□ -0.27
TMEM254-213ENST00000613758 PEAR1Q5VY43 1037 aaPredicted RBP13.36□□□□□ -0.27
TMEM254-213ENST00000613758 GTF2H2CQ6P1K8 395 aa13.36□□□□□ -0.27
TMEM254-213ENST00000613758 GOLGA7Q7Z5G4 137 aa13.36□□□□□ -0.27
TMEM254-213ENST00000613758 GKN2Q86XP6 184 aa13.36□□□□□ -0.27
TMEM254-213ENST00000613758 SYTL1Q8IYJ3 562 aa13.36□□□□□ -0.27
TMEM254-213ENST00000613758 FAM46DQ8NEK8 389 aa13.36□□□□□ -0.27
TMEM254-213ENST00000613758 MAPK15Q8TD08 544 aa13.36□□□□□ -0.27
TMEM254-213ENST00000613758 PYCR2Q96C36 320 aa13.36□□□□□ -0.27
TMEM254-213ENST00000613758 CXorf40BQ96DE9 158 aa13.36□□□□□ -0.27
TMEM254-213ENST00000613758 IL17FQ96PD4 163 aa13.36□□□□□ -0.27
TMEM254-213ENST00000613758 SLC32A1Q9H598 525 aa13.36□□□□□ -0.27
TMEM254-213ENST00000613758 STN1Q9H668 368 aaKnown RBP13.36□□□□□ -0.27
TMEM254-213ENST00000613758 LNPEPQ9UIQ6 1025 aa13.36□□□□□ -0.27
TMEM254-213ENST00000613758 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.36□□□□□ -0.27
TMEM254-213ENST00000613758 MATN2O00339 956 aa13.35□□□□□ -0.27
TMEM254-213ENST00000613758 AQP9O43315 295 aa13.35□□□□□ -0.27
TMEM254-213ENST00000613758 PIAS2O75928 621 aa13.35□□□□□ -0.27
TMEM254-213ENST00000613758 WDR47O94967 919 aa13.35□□□□□ -0.27
TMEM254-213ENST00000613758 MLYCDO95822 493 aa13.35□□□□□ -0.27
TMEM254-213ENST00000613758 NDUFS1P28331 727 aa13.35□□□□□ -0.27
TMEM254-213ENST00000613758 HOXD12P35452 270 aa13.35□□□□□ -0.27
TMEM254-213ENST00000613758 SLC19A1P41440 591 aa13.35□□□□□ -0.27
TMEM254-213ENST00000613758 DPP6P42658 865 aa13.35□□□□□ -0.27
TMEM254-213ENST00000613758 RPL14P50914 215 aaKnown RBP13.35□□□□□ -0.27
TMEM254-213ENST00000613758 PNLIPRP1P54315 467 aa13.35□□□□□ -0.27
TMEM254-213ENST00000613758 LCP2Q13094 533 aa13.35□□□□□ -0.27
TMEM254-213ENST00000613758 LPAL2Q16609 132 aa13.35□□□□□ -0.27
TMEM254-213ENST00000613758 DUOXA1Q1HG43 343 aa13.35□□□□□ -0.27
TMEM254-213ENST00000613758 EPGNQ6UW88 154 aa13.35□□□□□ -0.27
TMEM254-213ENST00000613758 LRRC70Q7Z2Q7 622 aa13.35□□□□□ -0.27
TMEM254-213ENST00000613758 PPFIBP2Q8ND30 876 aa13.35□□□□□ -0.27
TMEM254-213ENST00000613758 ZNF548Q8NEK5 533 aaPredicted RBP13.35□□□□□ -0.27
TMEM254-213ENST00000613758 OR56A3Q8NH54 315 aa13.35□□□□□ -0.27
TMEM254-213ENST00000613758 MED8Q96G25 268 aa13.35□□□□□ -0.27
TMEM254-213ENST00000613758 NMUR2Q9GZQ4 415 aa13.35□□□□□ -0.27
TMEM254-213ENST00000613758 NOL11Q9H8H0 719 aaKnown RBP13.35□□□□□ -0.27
TMEM254-213ENST00000613758 DOLKQ9UPQ8 538 aa13.35□□□□□ -0.27
TMEM254-213ENST00000613758 SLC22A14Q9Y267 594 aa13.35□□□□□ -0.27
TMEM254-213ENST00000613758 TNRC6BQ9UPQ9 1833 aaKnown RBP13.35□□□□□ -0.27
TMEM254-213ENST00000613758 KMT2EQ8IZD2 1858 aa13.35□□□□□ -0.27
TMEM254-213ENST00000613758 OR5K4A6NMS3 321 aa13.35□□□□□ -0.27
TMEM254-213ENST00000613758 FCHO1O14526 889 aa13.35□□□□□ -0.27
TMEM254-213ENST00000613758 YY2O15391 372 aa13.35□□□□□ -0.27
TMEM254-213ENST00000613758 SDC3O75056 442 aa13.35□□□□□ -0.27
TMEM254-213ENST00000613758 SLC2A4P14672 509 aa13.35□□□□□ -0.27
TMEM254-213ENST00000613758 EPB42P16452 691 aa13.35□□□□□ -0.27
TMEM254-213ENST00000613758 HSD17B2P37059 387 aa13.35□□□□□ -0.27
TMEM254-213ENST00000613758 SH3BP2P78314 561 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms