RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 MTO1Q9Y2Z2 717 aaKnown RBP10.73□□□□□ -0.69
LIG1-211ENST00000596457 B3GALT1Q9Y5Z6 326 aa10.73□□□□□ -0.69
LIG1-211ENST00000596457 USP9XQ93008 2570 aaPredicted RBP10.73□□□□□ -0.69
LIG1-211ENST00000596457 FAM159BA6NKW6 160 aa10.72□□□□□ -0.69
LIG1-211ENST00000596457 ARHGEF33A8MVX0 844 aa10.72□□□□□ -0.69
LIG1-211ENST00000596457 ESPNB1AK53 854 aa10.72□□□□□ -0.69
LIG1-211ENST00000596457 B4E171 279 aa10.72□□□□□ -0.69
LIG1-211ENST00000596457 MATN2O00339 956 aa10.72□□□□□ -0.69
LIG1-211ENST00000596457 POLR1CO15160 346 aaPredicted RBP10.72□□□□□ -0.69
LIG1-211ENST00000596457 TOX3O15405 576 aaPredicted RBP10.72□□□□□ -0.69
LIG1-211ENST00000596457 MAP3K7O43318 606 aa10.72□□□□□ -0.69
LIG1-211ENST00000596457 ZBTB14O43829 449 aa10.72□□□□□ -0.69
LIG1-211ENST00000596457 FAM155BO75949 473 aa10.72□□□□□ -0.69
LIG1-211ENST00000596457 ZBTB11O95625 1053 aaPredicted RBP10.72□□□□□ -0.69
LIG1-211ENST00000596457 CBSLP0DN79 551 aa10.72□□□□□ -0.69
LIG1-211ENST00000596457 ENO3P13929 434 aaPredicted RBP10.72□□□□□ -0.69
LIG1-211ENST00000596457 FOLR1P15328 257 aa10.72□□□□□ -0.69
LIG1-211ENST00000596457 ST6GAL1P15907 406 aa10.72□□□□□ -0.69
LIG1-211ENST00000596457 NELFEP18615 380 aaKnown RBP10.72□□□□□ -0.69
LIG1-211ENST00000596457 CD9P21926 228 aa10.72□□□□□ -0.69
LIG1-211ENST00000596457 FDXRP22570 491 aa10.72□□□□□ -0.69
LIG1-211ENST00000596457 STX2P32856 288 aa10.72□□□□□ -0.69
LIG1-211ENST00000596457 PHBP35232 272 aa10.72□□□□□ -0.69
LIG1-211ENST00000596457 CBSP35520 551 aa10.72□□□□□ -0.69
LIG1-211ENST00000596457 TSPAN7P41732 249 aa10.72□□□□□ -0.69
LIG1-211ENST00000596457 RAB28P51157 221 aa10.72□□□□□ -0.69
LIG1-211ENST00000596457 HSD11B2P80365 405 aa10.72□□□□□ -0.69
LIG1-211ENST00000596457 ZNF460Q14592 562 aa10.72□□□□□ -0.69
LIG1-211ENST00000596457 GPR19Q15760 415 aa10.72□□□□□ -0.69
LIG1-211ENST00000596457 COL28A1Q2UY09 1125 aa10.72□□□□□ -0.69
LIG1-211ENST00000596457 SPESP1Q6UW49 350 aa10.72□□□□□ -0.69
LIG1-211ENST00000596457 CEACAM20Q6UY09 585 aa10.72□□□□□ -0.69
LIG1-211ENST00000596457 CYHR1Q6ZMK1 362 aa10.72□□□□□ -0.69
LIG1-211ENST00000596457 CEP128Q6ZU80 1094 aa10.72□□□□□ -0.69
LIG1-211ENST00000596457 NEK10Q6ZWH5 1172 aa10.72□□□□□ -0.69
LIG1-211ENST00000596457 BMPERQ8N8U9 685 aa10.72□□□□□ -0.69
LIG1-211ENST00000596457 ZNF248Q8NDW4 579 aa10.72□□□□□ -0.69
LIG1-211ENST00000596457 OR9A1PQ8NGU1 263 aa10.72□□□□□ -0.69
LIG1-211ENST00000596457 OR2L8Q8NGY9 312 aa10.72□□□□□ -0.69
LIG1-211ENST00000596457 KCNE4Q8WWG9 221 aa10.72□□□□□ -0.69
LIG1-211ENST00000596457 BBC3Q96PG8 261 aaPredicted RBP10.72□□□□□ -0.69
LIG1-211ENST00000596457 OR2A14Q96R47 310 aa10.72□□□□□ -0.69
LIG1-211ENST00000596457 CD180Q99467 661 aa10.72□□□□□ -0.69
LIG1-211ENST00000596457 CPNE1Q99829 537 aa10.72□□□□□ -0.69
LIG1-211ENST00000596457 PHACTR1Q9C0D0 580 aa10.72□□□□□ -0.69
LIG1-211ENST00000596457 CAB39LQ9H9S4 337 aa10.72□□□□□ -0.69
LIG1-211ENST00000596457 C1GALT1Q9NS00 363 aa10.72□□□□□ -0.69
LIG1-211ENST00000596457 NINJ2Q9NZG7 142 aa10.72□□□□□ -0.69
LIG1-211ENST00000596457 OR6C2Q9NZP2 312 aa10.72□□□□□ -0.69
LIG1-211ENST00000596457 KLHL42Q9P2K6 505 aa10.72□□□□□ -0.69
LIG1-211ENST00000596457 CORO1CQ9ULV4 474 aaPredicted RBP10.72□□□□□ -0.69
LIG1-211ENST00000596457 KLHL20Q9Y2M5 609 aa10.72□□□□□ -0.69
LIG1-211ENST00000596457 PCDHB11Q9Y5F2 797 aa10.72□□□□□ -0.69
LIG1-211ENST00000596457 HECTD1Q9ULT8 2610 aa10.71□□□□□ -0.69
LIG1-211ENST00000596457 A0A0J9YY10 115 aa10.71□□□□□ -0.69
LIG1-211ENST00000596457 PABPN1LA6NDY0 278 aaKnown RBP10.71□□□□□ -0.69
LIG1-211ENST00000596457 NVLO15381 856 aaKnown RBP10.71□□□□□ -0.69
LIG1-211ENST00000596457 KLK10O43240 276 aa10.71□□□□□ -0.69
LIG1-211ENST00000596457 ZNF500O60304 480 aaPredicted RBP10.71□□□□□ -0.69
LIG1-211ENST00000596457 PSIP1O75475 530 aaKnown RBP10.71□□□□□ -0.69
LIG1-211ENST00000596457 ACSL3O95573 720 aa10.71□□□□□ -0.69
LIG1-211ENST00000596457 ITPKBP27987 946 aa10.71□□□□□ -0.69
LIG1-211ENST00000596457 PSMB5P28074 263 aa10.71□□□□□ -0.69
LIG1-211ENST00000596457 PEBP1P30086 187 aaKnown RBP10.71□□□□□ -0.69
LIG1-211ENST00000596457 RAB15P59190 212 aa10.71□□□□□ -0.69
LIG1-211ENST00000596457 IL2P60568 153 aa10.71□□□□□ -0.69
LIG1-211ENST00000596457 TUBB3Q13509 450 aa10.71□□□□□ -0.69
LIG1-211ENST00000596457 FASTKQ14296 549 aaKnown RBP10.71□□□□□ -0.69
LIG1-211ENST00000596457 USP10Q14694 798 aaKnown RBP10.71□□□□□ -0.69
LIG1-211ENST00000596457 KIR2DS3Q14952 304 aa10.71□□□□□ -0.69
LIG1-211ENST00000596457 TGIF1Q15583 401 aa10.71□□□□□ -0.69
LIG1-211ENST00000596457 SF1Q15637 639 aaKnown RBP10.71□□□□□ -0.69
LIG1-211ENST00000596457 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.71□□□□□ -0.69
LIG1-211ENST00000596457 UBAP2Q5T6F2 1119 aaKnown RBP10.71□□□□□ -0.69
LIG1-211ENST00000596457 SUSD1Q6UWL2 747 aa10.71□□□□□ -0.69
LIG1-211ENST00000596457 CLEC14AQ86T13 490 aa10.71□□□□□ -0.69
LIG1-211ENST00000596457 MYO18BQ8IUG5 2567 aa10.71□□□□□ -0.69
LIG1-211ENST00000596457 LINC01555Q8NAE3 123 aa10.71□□□□□ -0.69
LIG1-211ENST00000596457 PPFIBP2Q8ND30 876 aa10.71□□□□□ -0.69
LIG1-211ENST00000596457 N4BP2L2Q92802 583 aaPredicted RBP10.71□□□□□ -0.69
LIG1-211ENST00000596457 ALKBH8Q96BT7 664 aaKnown RBP10.71□□□□□ -0.69
LIG1-211ENST00000596457 VPS39Q96JC1 886 aa10.71□□□□□ -0.69
LIG1-211ENST00000596457 SLC41A2Q96JW4 573 aa10.71□□□□□ -0.69
LIG1-211ENST00000596457 TRAPPC9Q96Q05 1148 aa10.71□□□□□ -0.69
LIG1-211ENST00000596457 PKP4Q99569 1192 aa10.71□□□□□ -0.69
LIG1-211ENST00000596457 RBBP8Q99708 897 aa10.71□□□□□ -0.69
LIG1-211ENST00000596457 RAB11FIP5Q9BXF6 653 aa10.71□□□□□ -0.69
LIG1-211ENST00000596457 ASPSCR1Q9BZE9 553 aa10.71□□□□□ -0.69
LIG1-211ENST00000596457 FAM129AQ9BZQ8 928 aa10.71□□□□□ -0.69
LIG1-211ENST00000596457 UNKQ9C0B0 810 aaKnown RBP10.71□□□□□ -0.69
LIG1-211ENST00000596457 TSPYL1Q9H0U9 437 aa10.71□□□□□ -0.69
LIG1-211ENST00000596457 CDC42EP4Q9H3Q1 356 aaKnown RBP10.71□□□□□ -0.69
LIG1-211ENST00000596457 RHOJQ9H4E5 214 aa10.71□□□□□ -0.69
LIG1-211ENST00000596457 PDE7BQ9NP56 450 aa10.71□□□□□ -0.69
LIG1-211ENST00000596457 FBXO8Q9NRD0 319 aa10.71□□□□□ -0.69
LIG1-211ENST00000596457 ADAMTS6Q9UKP5 1117 aa10.71□□□□□ -0.69
LIG1-211ENST00000596457 RARRES3Q9UL19 164 aa10.71□□□□□ -0.69
LIG1-211ENST00000596457 PCDHGA7Q9Y5G6 932 aa10.71□□□□□ -0.69
LIG1-211ENST00000596457 PCM1Q15154 2024 aa10.7□□□□□ -0.7
LIG1-211ENST00000596457 SPAG6O75602 509 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms