RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 ADRB1P08588 477 aa10.22□□□□□ -0.77
LIG1-210ENST00000596332 LTA4HP09960 611 aaKnown RBP10.22□□□□□ -0.77
LIG1-210ENST00000596332 CREB1P16220 341 aa10.22□□□□□ -0.77
LIG1-210ENST00000596332 CCKBRP32239 447 aa10.22□□□□□ -0.77
LIG1-210ENST00000596332 GABRA4P48169 554 aa10.22□□□□□ -0.77
LIG1-210ENST00000596332 RGS4P49798 205 aa10.22□□□□□ -0.77
LIG1-210ENST00000596332 SERPINB8P50452 374 aa10.22□□□□□ -0.77
LIG1-210ENST00000596332 SLC18A2Q05940 514 aa10.22□□□□□ -0.77
LIG1-210ENST00000596332 TARDBPQ13148 414 aaKnown RBP eCLIP10.22□□□□□ -0.77
LIG1-210ENST00000596332 SP140Q13342 867 aa10.22□□□□□ -0.77
LIG1-210ENST00000596332 TGFBIQ15582 683 aa10.22□□□□□ -0.77
LIG1-210ENST00000596332 LRRC8EQ6NSJ5 796 aa10.22□□□□□ -0.77
LIG1-210ENST00000596332 DGLUCYQ7Z3D6 616 aa10.22□□□□□ -0.77
LIG1-210ENST00000596332 MYO1HQ8N1T3 1032 aa10.22□□□□□ -0.77
LIG1-210ENST00000596332 BMPERQ8N8U9 685 aa10.22□□□□□ -0.77
LIG1-210ENST00000596332 PPFIBP2Q8ND30 876 aa10.22□□□□□ -0.77
LIG1-210ENST00000596332 RCBTB1Q8NDN9 531 aa10.22□□□□□ -0.77
LIG1-210ENST00000596332 OR10G6Q8NH81 332 aa10.22□□□□□ -0.77
LIG1-210ENST00000596332 KLHL6Q8WZ60 621 aa10.22□□□□□ -0.77
LIG1-210ENST00000596332 ZBTB9Q96C00 473 aa10.22□□□□□ -0.77
LIG1-210ENST00000596332 MAP3K3Q99759 626 aa10.22□□□□□ -0.77
LIG1-210ENST00000596332 SGPP1Q9BX95 441 aa10.22□□□□□ -0.77
LIG1-210ENST00000596332 TMEM121BQ9BXQ6 578 aaPredicted RBP10.22□□□□□ -0.77
LIG1-210ENST00000596332 ROPN1BQ9BZX4 212 aaPredicted RBP10.22□□□□□ -0.77
LIG1-210ENST00000596332 EPB41L1Q9H4G0 881 aa10.22□□□□□ -0.77
LIG1-210ENST00000596332 ROPN1Q9HAT0 212 aaPredicted RBP10.22□□□□□ -0.77
LIG1-210ENST00000596332 INTS7Q9NVH2 962 aaKnown RBP10.22□□□□□ -0.77
LIG1-210ENST00000596332 OR6C2Q9NZP2 312 aa10.22□□□□□ -0.77
LIG1-210ENST00000596332 KLK13Q9UKR3 277 aa10.22□□□□□ -0.77
LIG1-210ENST00000596332 POMT2Q9UKY4 750 aa10.22□□□□□ -0.77
LIG1-210ENST00000596332 EMCNQ9ULC0 261 aa10.22□□□□□ -0.77
LIG1-210ENST00000596332 SH2B3Q9UQQ2 575 aa10.22□□□□□ -0.77
LIG1-210ENST00000596332 OARD1Q9Y530 152 aa10.22□□□□□ -0.77
LIG1-210ENST00000596332 ASB1Q9Y576 335 aa10.22□□□□□ -0.77
LIG1-210ENST00000596332 UNC13CQ8NB66 2214 aa10.22□□□□□ -0.77
LIG1-210ENST00000596332 NCOR2Q9Y618 2525 aa10.22□□□□□ -0.77
LIG1-210ENST00000596332 A0A087X1B8 175 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 MED19A0JLT2 244 aaPredicted RBP10.21□□□□□ -0.77
LIG1-210ENST00000596332 H3BMH7 237 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 NRP2O60462 931 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 PRAMEF4O60810 478 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 CDH16O75309 829 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 CSO75390 466 aaKnown RBP10.21□□□□□ -0.77
LIG1-210ENST00000596332 KRT37O76014 449 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 CATP04040 527 aaKnown RBP10.21□□□□□ -0.77
LIG1-210ENST00000596332 MPOP05164 745 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 ANKRD34CP0C6C1 535 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 PYGBP11216 843 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 PVRP15151 417 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 UGT2B7P16662 529 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 NPPBP16860 134 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 AMD1P17707 334 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 EPORP19235 508 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 TFEBP19484 476 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 PSMB5P28074 263 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 SHMT2P34897 504 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 GGT5P36269 586 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 MAPK9P45984 424 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 SLC6A12P48065 614 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 PNLIPRP1P54315 467 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 ATP6V0D1P61421 351 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 CDKL1Q00532 357 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 SPIDRQ14159 915 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 KRT33BQ14525 404 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 ARHGAP19Q14CB8 494 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 TECRLQ5HYJ1 363 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 PRAMEF9Q5VWM5 478 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 AGTRAPQ6RW13 159 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 SUSD1Q6UWL2 747 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 RBM44Q6ZP01 1051 aaKnown RBP10.21□□□□□ -0.77
LIG1-210ENST00000596332 PRSS42Q7Z5A4 293 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 TRABD2AQ86V40 505 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 KLHDC8AQ8IYD2 350 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 OR56A3Q8NH54 315 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 WDR48Q8TAF3 677 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 MCOLN3Q8TDD5 553 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 SKA2Q8WVK7 121 aaPredicted RBP10.21□□□□□ -0.77
LIG1-210ENST00000596332 RHBDF1Q96CC6 855 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 FBXL8Q96CD0 374 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 MTBPQ96DY7 904 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 SLC41A2Q96JW4 573 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 CCDC74BQ96LY2 380 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 CCDC138Q96M89 665 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 FOPNLQ96NB1 174 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 TRAPPC9Q96Q05 1148 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 OR4K3Q96R72 315 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 CCDC77Q9BR77 488 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 TMEM79Q9BSE2 394 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 VPS11Q9H270 941 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 C12orf65Q9H3J6 166 aaKnown RBP10.21□□□□□ -0.77
LIG1-210ENST00000596332 STN1Q9H668 368 aaKnown RBP10.21□□□□□ -0.77
LIG1-210ENST00000596332 PPCSQ9HAB8 311 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 FAM60AQ9NP50 221 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 SIDT1Q9NXL6 827 aaKnown RBP10.21□□□□□ -0.77
LIG1-210ENST00000596332 ACTR10Q9NZ32 417 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 TMEM216Q9P0N5 145 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 SPATA7Q9P0W8 599 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 PTBP2Q9UKA9 531 aaKnown RBP10.21□□□□□ -0.77
LIG1-210ENST00000596332 CLCA2Q9UQC9 943 aa10.21□□□□□ -0.77
LIG1-210ENST00000596332 KLK4Q9Y5K2 254 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms