RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 C2orf73Q8N5S3 287 aaPredicted RBP10.97□□□□□ -0.65
VMP1-207ENST00000588131 ZNF548Q8NEK5 533 aaPredicted RBP10.97□□□□□ -0.65
VMP1-207ENST00000588131 OR52B6Q8NGF0 335 aa10.97□□□□□ -0.65
VMP1-207ENST00000588131 OR52E1Q8NGJ3 308 aa10.97□□□□□ -0.65
VMP1-207ENST00000588131 OR56A3Q8NH54 315 aa10.97□□□□□ -0.65
VMP1-207ENST00000588131 BCAS4Q8TDM0 211 aa10.97□□□□□ -0.65
VMP1-207ENST00000588131 ATL1Q8WXF7 558 aa10.97□□□□□ -0.65
VMP1-207ENST00000588131 JPH3Q8WXH2 748 aaPredicted RBP10.97□□□□□ -0.65
VMP1-207ENST00000588131 MED8Q96G25 268 aa10.97□□□□□ -0.65
VMP1-207ENST00000588131 TRMOQ9BU70 441 aa10.97□□□□□ -0.65
VMP1-207ENST00000588131 ILKAPQ9H0C8 392 aaPredicted RBP10.97□□□□□ -0.65
VMP1-207ENST00000588131 SLC32A1Q9H598 525 aa10.97□□□□□ -0.65
VMP1-207ENST00000588131 MVB12BQ9H7P6 319 aa10.97□□□□□ -0.65
VMP1-207ENST00000588131 NOL11Q9H8H0 719 aaKnown RBP10.97□□□□□ -0.65
VMP1-207ENST00000588131 IPPKQ9H8X2 491 aa10.97□□□□□ -0.65
VMP1-207ENST00000588131 ERVMER34-1Q9H9K5 563 aa10.97□□□□□ -0.65
VMP1-207ENST00000588131 NPHS2Q9NP85 383 aa10.97□□□□□ -0.65
VMP1-207ENST00000588131 MID1IP1Q9NPA3 183 aa10.97□□□□□ -0.65
VMP1-207ENST00000588131 INTS7Q9NVH2 962 aaKnown RBP10.97□□□□□ -0.65
VMP1-207ENST00000588131 UCKL1Q9NWZ5 548 aa10.97□□□□□ -0.65
VMP1-207ENST00000588131 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.97□□□□□ -0.65
VMP1-207ENST00000588131 SPATA7Q9P0W8 599 aa10.97□□□□□ -0.65
VMP1-207ENST00000588131 SPASTQ9UBP0 616 aa10.97□□□□□ -0.65
VMP1-207ENST00000588131 SUSD2Q9UGT4 822 aa10.97□□□□□ -0.65
VMP1-207ENST00000588131 HAO1Q9UJM8 370 aa10.97□□□□□ -0.65
VMP1-207ENST00000588131 ZNF225Q9UK10 706 aa10.97□□□□□ -0.65
VMP1-207ENST00000588131 ICKQ9UPZ9 632 aa10.97□□□□□ -0.65
VMP1-207ENST00000588131 SLC22A14Q9Y267 594 aa10.97□□□□□ -0.65
VMP1-207ENST00000588131 PCDHGA2Q9Y5H1 932 aa10.97□□□□□ -0.65
VMP1-207ENST00000588131 MUC3AQ02505 3323 aa10.96□□□□□ -0.65
VMP1-207ENST00000588131 PRR33A8MZF0 331 aa10.96□□□□□ -0.65
VMP1-207ENST00000588131 PATE3B3GLJ2 98 aa10.96□□□□□ -0.65
VMP1-207ENST00000588131 B4DGG1 531 aa10.96□□□□□ -0.65
VMP1-207ENST00000588131 E7ENX8 843 aa10.96□□□□□ -0.65
VMP1-207ENST00000588131 AQP9O43315 295 aa10.96□□□□□ -0.65
VMP1-207ENST00000588131 SNX3O60493 162 aa10.96□□□□□ -0.65
VMP1-207ENST00000588131 PIAS2O75928 621 aa10.96□□□□□ -0.65
VMP1-207ENST00000588131 TGDSO95455 350 aa10.96□□□□□ -0.65
VMP1-207ENST00000588131 FOXA1P55317 472 aa10.96□□□□□ -0.65
VMP1-207ENST00000588131 NAA20P61599 178 aa10.96□□□□□ -0.65
VMP1-207ENST00000588131 HNRNPKP61978 463 aaKnown RBP eCLIP10.96□□□□□ -0.65
VMP1-207ENST00000588131 UBE2IP63279 158 aaKnown RBP10.96□□□□□ -0.65
VMP1-207ENST00000588131 TAP2Q03519 686 aa10.96□□□□□ -0.65
VMP1-207ENST00000588131 GABPB1Q06547 395 aaPredicted RBP10.96□□□□□ -0.65
VMP1-207ENST00000588131 TRAF3Q13114 568 aa10.96□□□□□ -0.65
VMP1-207ENST00000588131 KRT33BQ14525 404 aa10.96□□□□□ -0.65
VMP1-207ENST00000588131 ELOCQ15369 112 aa10.96□□□□□ -0.65
VMP1-207ENST00000588131 CYP2A13Q16696 494 aa10.96□□□□□ -0.65
VMP1-207ENST00000588131 SH2D4BQ5SQS7 431 aa10.96□□□□□ -0.65
VMP1-207ENST00000588131 METTL2BQ6P1Q9 378 aaKnown RBP10.96□□□□□ -0.65
VMP1-207ENST00000588131 SUSD1Q6UWL2 747 aa10.96□□□□□ -0.65
VMP1-207ENST00000588131 SPATA21Q7Z572 469 aa10.96□□□□□ -0.65
VMP1-207ENST00000588131 THOC6Q86W42 341 aaKnown RBP10.96□□□□□ -0.65
VMP1-207ENST00000588131 SYTL1Q8IYJ3 562 aa10.96□□□□□ -0.65
VMP1-207ENST00000588131 DCBLD1Q8N8Z6 715 aa10.96□□□□□ -0.65
VMP1-207ENST00000588131 SNX31Q8N9S9 440 aa10.96□□□□□ -0.65
VMP1-207ENST00000588131 FAM46DQ8NEK8 389 aa10.96□□□□□ -0.65
VMP1-207ENST00000588131 PIWIL2Q8TC59 973 aaKnown RBP10.96□□□□□ -0.65
VMP1-207ENST00000588131 SLC37A2Q8TED4 501 aa10.96□□□□□ -0.65
VMP1-207ENST00000588131 ZDHHC1Q8WTX9 485 aa10.96□□□□□ -0.65
VMP1-207ENST00000588131 GRAMD1AQ96CP6 724 aa10.96□□□□□ -0.65
VMP1-207ENST00000588131 CXorf40BQ96DE9 158 aa10.96□□□□□ -0.65
VMP1-207ENST00000588131 PRR11Q96HE9 360 aaPredicted RBP10.96□□□□□ -0.65
VMP1-207ENST00000588131 CDK15Q96Q40 435 aa10.96□□□□□ -0.65
VMP1-207ENST00000588131 OR4K3Q96R72 315 aa10.96□□□□□ -0.65
VMP1-207ENST00000588131 KCNA7Q96RP8 456 aa10.96□□□□□ -0.65
VMP1-207ENST00000588131 ZNF382Q96SR6 550 aa10.96□□□□□ -0.65
VMP1-207ENST00000588131 XKR8Q9H6D3 395 aa10.96□□□□□ -0.65
VMP1-207ENST00000588131 KIR3DX1Q9H7L2 352 aa10.96□□□□□ -0.65
VMP1-207ENST00000588131 EML4Q9HC35 981 aaKnown RBP10.96□□□□□ -0.65
VMP1-207ENST00000588131 ABCF3Q9NUQ8 709 aa10.96□□□□□ -0.65
VMP1-207ENST00000588131 DNAJC11Q9NVH1 559 aa10.96□□□□□ -0.65
VMP1-207ENST00000588131 POLG2Q9UHN1 485 aa10.96□□□□□ -0.65
VMP1-207ENST00000588131 SH2B3Q9UQQ2 575 aa10.96□□□□□ -0.65
VMP1-207ENST00000588131 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.96□□□□□ -0.65
VMP1-207ENST00000588131 FIS1Q9Y3D6 152 aa10.96□□□□□ -0.65
VMP1-207ENST00000588131 ANGPTL3Q9Y5C1 460 aa10.96□□□□□ -0.65
VMP1-207ENST00000588131 HEBP2Q9Y5Z4 205 aa10.96□□□□□ -0.65
VMP1-207ENST00000588131 R4GN57 208 aa10.96□□□□□ -0.65
VMP1-207ENST00000588131 SPAG17Q6Q759 2223 aa10.96□□□□□ -0.66
VMP1-207ENST00000588131 TDRD6O60522 2096 aaKnown RBP10.96□□□□□ -0.66
VMP1-207ENST00000588131 ZDBF2Q9HCK1 2354 aa10.95□□□□□ -0.66
VMP1-207ENST00000588131 NDUFAB1O14561 156 aa10.95□□□□□ -0.66
VMP1-207ENST00000588131 ZNF195O14628 629 aa10.95□□□□□ -0.66
VMP1-207ENST00000588131 YY2O15391 372 aa10.95□□□□□ -0.66
VMP1-207ENST00000588131 PRAMEF4O60810 478 aa10.95□□□□□ -0.66
VMP1-207ENST00000588131 OR4F21O95013 312 aa10.95□□□□□ -0.66
VMP1-207ENST00000588131 SNUPNO95149 360 aaKnown RBP10.95□□□□□ -0.66
VMP1-207ENST00000588131 MLYCDO95822 493 aa10.95□□□□□ -0.66
VMP1-207ENST00000588131 CFIP05156 583 aa10.95□□□□□ -0.66
VMP1-207ENST00000588131 JUNP05412 331 aaKnown RBP10.95□□□□□ -0.66
VMP1-207ENST00000588131 TROVE2P10155 538 aaKnown RBP eCLIP10.95□□□□□ -0.66
VMP1-207ENST00000588131 EPB42P16452 691 aa10.95□□□□□ -0.66
VMP1-207ENST00000588131 XRCC1P18887 633 aaPredicted RBP10.95□□□□□ -0.66
VMP1-207ENST00000588131 PKLRP30613 574 aa10.95□□□□□ -0.66
VMP1-207ENST00000588131 RPL14P50914 215 aaKnown RBP10.95□□□□□ -0.66
VMP1-207ENST00000588131 ERVPABLB-1P60509 514 aa10.95□□□□□ -0.66
VMP1-207ENST00000588131 BNIP3Q12983 259 aa10.95□□□□□ -0.66
VMP1-207ENST00000588131 GRIK2Q13002 908 aa10.95□□□□□ -0.66
VMP1-207ENST00000588131 CDC16Q13042 620 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms