RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 ZBTB2Q8N680 514 aa18.81■□□□□ 0.6
SREBF1-220ENST00000581707 LMNTD1Q8N9Z9 388 aa18.81■□□□□ 0.6
SREBF1-220ENST00000581707 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.81■□□□□ 0.6
SREBF1-220ENST00000581707 RAB11FIP5Q9BXF6 653 aa18.81■□□□□ 0.6
SREBF1-220ENST00000581707 ACTR5Q9H9F9 607 aaPredicted RBP18.81■□□□□ 0.6
SREBF1-220ENST00000581707 FBXO6Q9NRD1 293 aaPredicted RBP18.81■□□□□ 0.6
SREBF1-220ENST00000581707 GEMIN8Q9NWZ8 242 aaKnown RBP18.81■□□□□ 0.6
SREBF1-220ENST00000581707 TSR3Q9UJK0 312 aaKnown RBP18.81■□□□□ 0.6
SREBF1-220ENST00000581707 E7EQ34 232 aa18.8■□□□□ 0.6
SREBF1-220ENST00000581707 MEN1O00255 615 aa18.8■□□□□ 0.6
SREBF1-220ENST00000581707 MATN4O95460 622 aa18.8■□□□□ 0.6
SREBF1-220ENST00000581707 F7P08709 466 aaPredicted RBP18.8■□□□□ 0.6
SREBF1-220ENST00000581707 PGAM1P18669 254 aa18.8■□□□□ 0.6
SREBF1-220ENST00000581707 PTPN4P29074 926 aa18.8■□□□□ 0.6
SREBF1-220ENST00000581707 SLC1A2P43004 574 aa18.8■□□□□ 0.6
SREBF1-220ENST00000581707 PAFAH1B1P43034 410 aa18.8■□□□□ 0.6
SREBF1-220ENST00000581707 BDKRB1P46663 353 aa18.8■□□□□ 0.6
SREBF1-220ENST00000581707 POLE2P56282 527 aa18.8■□□□□ 0.6
SREBF1-220ENST00000581707 RPS15P62841 145 aaKnown RBP18.8■□□□□ 0.6
SREBF1-220ENST00000581707 DR1Q01658 176 aa18.8■□□□□ 0.6
SREBF1-220ENST00000581707 DHX9Q08211 1270 aaKnown RBP18.8■□□□□ 0.6
SREBF1-220ENST00000581707 HSP90AA5PQ58FG0 334 aa18.8■□□□□ 0.6
SREBF1-220ENST00000581707 ACSBG2Q5FVE4 666 aa18.8■□□□□ 0.6
SREBF1-220ENST00000581707 ZNF517Q6ZMY9 492 aaPredicted RBP18.8■□□□□ 0.6
SREBF1-220ENST00000581707 ZNF605Q86T29 641 aa18.8■□□□□ 0.6
SREBF1-220ENST00000581707 TAX1BP1Q86VP1 789 aa18.8■□□□□ 0.6
SREBF1-220ENST00000581707 FAM20CQ8IXL6 584 aa18.8■□□□□ 0.6
SREBF1-220ENST00000581707 GPR135Q8IZ08 494 aa18.8■□□□□ 0.6
SREBF1-220ENST00000581707 DSELQ8IZU8 1212 aa18.8■□□□□ 0.6
SREBF1-220ENST00000581707 RAB42Q8N4Z0 105 aa18.8■□□□□ 0.6
SREBF1-220ENST00000581707 MAGEC3Q8TD91 643 aa18.8■□□□□ 0.6
SREBF1-220ENST00000581707 SLC7A5P2Q9GIP4 190 aa18.8■□□□□ 0.6
SREBF1-220ENST00000581707 CHST8Q9H2A9 424 aa18.8■□□□□ 0.6
SREBF1-220ENST00000581707 CCDC68Q9H2F9 335 aa18.8■□□□□ 0.6
SREBF1-220ENST00000581707 ADNPQ9H2P0 1102 aa18.8■□□□□ 0.6
SREBF1-220ENST00000581707 ACTL8Q9H568 366 aa18.8■□□□□ 0.6
SREBF1-220ENST00000581707 FBXO5Q9UKT4 447 aa18.8■□□□□ 0.6
SREBF1-220ENST00000581707 HELZ2Q9BYK8 2649 aaKnown RBP18.79■□□□□ 0.6
SREBF1-220ENST00000581707 ZNF749O43361 778 aa18.79■□□□□ 0.6
SREBF1-220ENST00000581707 OR2B3O76000 313 aa18.79■□□□□ 0.6
SREBF1-220ENST00000581707 RECKO95980 971 aa18.79■□□□□ 0.6
SREBF1-220ENST00000581707 FURINP09958 794 aa18.79■□□□□ 0.6
SREBF1-220ENST00000581707 RORAP35398 523 aa18.79■□□□□ 0.6
SREBF1-220ENST00000581707 CLCN7P51798 805 aa18.79■□□□□ 0.6
SREBF1-220ENST00000581707 CRYMQ14894 314 aa18.79■□□□□ 0.6
SREBF1-220ENST00000581707 DEFB110Q30KQ9 67 aa18.79■□□□□ 0.6
SREBF1-220ENST00000581707 CCSMST1Q4G0I0 132 aa18.79■□□□□ 0.6
SREBF1-220ENST00000581707 MSS51Q4VC12 460 aa18.79■□□□□ 0.6
SREBF1-220ENST00000581707 DNAJC22Q8N4W6 341 aa18.79■□□□□ 0.6
SREBF1-220ENST00000581707 APOBEC4Q8WW27 367 aaKnown RBP18.79■□□□□ 0.6
SREBF1-220ENST00000581707 RUFY1Q96T51 708 aa18.79■□□□□ 0.6
SREBF1-220ENST00000581707 EBNA1BP2Q99848 306 aaKnown RBP18.79■□□□□ 0.6
SREBF1-220ENST00000581707 FAM167BQ9BTA0 163 aa18.79■□□□□ 0.6
SREBF1-220ENST00000581707 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.79■□□□□ 0.6
SREBF1-220ENST00000581707 KLHL42Q9P2K6 505 aa18.79■□□□□ 0.6
SREBF1-220ENST00000581707 RNF14Q9UBS8 474 aa18.79■□□□□ 0.6
SREBF1-220ENST00000581707 FARSAQ9Y285 508 aaKnown RBP18.79■□□□□ 0.6
SREBF1-220ENST00000581707 CDC14CA4D256 554 aa18.78■□□□□ 0.6
SREBF1-220ENST00000581707 B8ZZF3 427 aa18.78■□□□□ 0.6
SREBF1-220ENST00000581707 CCDC188H7C350 402 aa18.78■□□□□ 0.6
SREBF1-220ENST00000581707 HCRTR1O43613 425 aa18.78■□□□□ 0.6
SREBF1-220ENST00000581707 BANF1O75531 89 aa18.78■□□□□ 0.6
SREBF1-220ENST00000581707 TTC4O95801 387 aa18.78■□□□□ 0.6
SREBF1-220ENST00000581707 HBQ1P09105 142 aa18.78■□□□□ 0.6
SREBF1-220ENST00000581707 MAGP20916 626 aa18.78■□□□□ 0.6
SREBF1-220ENST00000581707 GABRA4P48169 554 aa18.78■□□□□ 0.6
SREBF1-220ENST00000581707 RPS18P62269 152 aaKnown RBP18.78■□□□□ 0.6
SREBF1-220ENST00000581707 NFATC3Q12968 1075 aa18.78■□□□□ 0.6
SREBF1-220ENST00000581707 KCNAB2Q13303 367 aa18.78■□□□□ 0.6
SREBF1-220ENST00000581707 MORF4L2Q15014 288 aa18.78■□□□□ 0.6
SREBF1-220ENST00000581707 SF1Q15637 639 aaKnown RBP18.78■□□□□ 0.6
SREBF1-220ENST00000581707 KLHL38Q2WGJ6 581 aa18.78■□□□□ 0.6
SREBF1-220ENST00000581707 TTLL9Q3SXZ7 439 aa18.78■□□□□ 0.6
SREBF1-220ENST00000581707 BBS9Q3SYG4 887 aa18.78■□□□□ 0.6
SREBF1-220ENST00000581707 LCN10Q6JVE6 187 aa18.78■□□□□ 0.6
SREBF1-220ENST00000581707 ZNF549Q6P9A3 640 aa18.78■□□□□ 0.6
SREBF1-220ENST00000581707 KCNMB4Q86W47 210 aa18.78■□□□□ 0.6
SREBF1-220ENST00000581707 KCNJ9Q92806 393 aa18.78■□□□□ 0.6
SREBF1-220ENST00000581707 NAT9Q9BTE0 207 aa18.78■□□□□ 0.6
SREBF1-220ENST00000581707 SPRTNQ9H040 489 aaPredicted RBP18.78■□□□□ 0.6
SREBF1-220ENST00000581707 IARS2Q9NSE4 1012 aaKnown RBP18.78■□□□□ 0.6
SREBF1-220ENST00000581707 STARD5Q9NSY2 213 aa18.78■□□□□ 0.6
SREBF1-220ENST00000581707 PCMTD2Q9NV79 361 aa18.78■□□□□ 0.6
SREBF1-220ENST00000581707 PLCL2Q9UPR0 1127 aa18.78■□□□□ 0.6
SREBF1-220ENST00000581707 POLHQ9Y253 713 aa18.78■□□□□ 0.6
SREBF1-220ENST00000581707 KLHL20Q9Y2M5 609 aa18.78■□□□□ 0.6
SREBF1-220ENST00000581707 AP1M2Q9Y6Q5 423 aa18.78■□□□□ 0.6
SREBF1-220ENST00000581707 KRT87PA6NCN2 255 aa18.77■□□□□ 0.6
SREBF1-220ENST00000581707 H3BMH7 237 aa18.77■□□□□ 0.6
SREBF1-220ENST00000581707 FANCGO15287 622 aa18.77■□□□□ 0.6
SREBF1-220ENST00000581707 PRICKLE3O43900 615 aaPredicted RBP18.77■□□□□ 0.6
SREBF1-220ENST00000581707 HAUS5O94927 633 aa18.77■□□□□ 0.6
SREBF1-220ENST00000581707 MPP1Q00013 466 aa18.77■□□□□ 0.6
SREBF1-220ENST00000581707 SPANXN3Q5MJ09 141 aa18.77■□□□□ 0.6
SREBF1-220ENST00000581707 SYTL1Q8IYJ3 562 aa18.77■□□□□ 0.6
SREBF1-220ENST00000581707 PDIK1LQ8N165 341 aa18.77■□□□□ 0.6
SREBF1-220ENST00000581707 GABPB2Q8TAK5 448 aaPredicted RBP18.77■□□□□ 0.6
SREBF1-220ENST00000581707 HMGCLL1Q8TB92 370 aa18.77■□□□□ 0.6
SREBF1-220ENST00000581707 DENND1AQ8TEH3 1009 aa18.77■□□□□ 0.6
SREBF1-220ENST00000581707 SEC14L1Q92503 715 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms