RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 UBASH3AP57075 661 aa4.33□□□□□ -1.72
SMCHD1-205ENST00000581383 CA9Q16790 459 aa4.33□□□□□ -1.72
SMCHD1-205ENST00000581383 ACCSLQ4AC99 568 aa4.33□□□□□ -1.72
SMCHD1-205ENST00000581383 MCMDC2Q4G0Z9 681 aa4.33□□□□□ -1.72
SMCHD1-205ENST00000581383 CCDC184Q52MB2 194 aa4.33□□□□□ -1.72
SMCHD1-205ENST00000581383 C11orf63Q6NUN7 778 aa4.33□□□□□ -1.72
SMCHD1-205ENST00000581383 PET117Q6UWS5 81 aa4.33□□□□□ -1.72
SMCHD1-205ENST00000581383 OR8H3Q8N146 312 aa4.33□□□□□ -1.72
SMCHD1-205ENST00000581383 GOT1L1Q8NHS2 421 aaPredicted RBP4.33□□□□□ -1.72
SMCHD1-205ENST00000581383 GRHL3Q8TE85 626 aa4.33□□□□□ -1.72
SMCHD1-205ENST00000581383 DEPDC1BQ8WUY9 529 aa4.33□□□□□ -1.72
SMCHD1-205ENST00000581383 ZNF354BQ96LW1 612 aa4.33□□□□□ -1.72
SMCHD1-205ENST00000581383 RMDN2Q96LZ7 410 aa4.33□□□□□ -1.72
SMCHD1-205ENST00000581383 NODALQ96S42 347 aa4.33□□□□□ -1.72
SMCHD1-205ENST00000581383 RHNO1Q9BSD3 238 aa4.33□□□□□ -1.72
SMCHD1-205ENST00000581383 BICC1Q9H694 974 aaKnown RBP4.33□□□□□ -1.72
SMCHD1-205ENST00000581383 ZWILCHQ9H900 591 aa4.33□□□□□ -1.72
SMCHD1-205ENST00000581383 GKN1Q9NS71 199 aa4.33□□□□□ -1.72
SMCHD1-205ENST00000581383 ZNF701Q9NV72 531 aaPredicted RBP4.33□□□□□ -1.72
SMCHD1-205ENST00000581383 FAM118AQ9NWS6 357 aa4.33□□□□□ -1.72
SMCHD1-205ENST00000581383 POLLQ9UGP5 575 aa4.33□□□□□ -1.72
SMCHD1-205ENST00000581383 FLT1P17948 1338 aa4.32□□□□□ -1.72
SMCHD1-205ENST00000581383 PLOD2O00469 737 aa4.32□□□□□ -1.72
SMCHD1-205ENST00000581383 PLGP00747 810 aaPredicted RBP4.32□□□□□ -1.72
SMCHD1-205ENST00000581383 IGLV2-11P01706 119 aa4.32□□□□□ -1.72
SMCHD1-205ENST00000581383 HAPLN1P10915 354 aaPredicted RBP4.32□□□□□ -1.72
SMCHD1-205ENST00000581383 FGF5P12034 268 aa4.32□□□□□ -1.72
SMCHD1-205ENST00000581383 CDC25CP30307 473 aa4.32□□□□□ -1.72
SMCHD1-205ENST00000581383 HOXC8P31273 242 aa4.32□□□□□ -1.72
SMCHD1-205ENST00000581383 HOXC13P31276 330 aa4.32□□□□□ -1.72
SMCHD1-205ENST00000581383 TLX1P31314 330 aaPredicted RBP4.32□□□□□ -1.72
SMCHD1-205ENST00000581383 PTGER4P35408 488 aa4.32□□□□□ -1.72
SMCHD1-205ENST00000581383 NR2C2P49116 596 aa4.32□□□□□ -1.72
SMCHD1-205ENST00000581383 BMXP51813 675 aa4.32□□□□□ -1.72
SMCHD1-205ENST00000581383 RBP5P82980 135 aa4.32□□□□□ -1.72
SMCHD1-205ENST00000581383 LGALS3BPQ08380 585 aa4.32□□□□□ -1.72
SMCHD1-205ENST00000581383 BFSP1Q12934 665 aa4.32□□□□□ -1.72
SMCHD1-205ENST00000581383 CUL3Q13618 768 aa4.32□□□□□ -1.72
SMCHD1-205ENST00000581383 SCARB2Q14108 478 aa4.32□□□□□ -1.72
SMCHD1-205ENST00000581383 DCAF10Q5QP82 559 aa4.32□□□□□ -1.72
SMCHD1-205ENST00000581383 C6orf136Q5SQH8 315 aa4.32□□□□□ -1.72
SMCHD1-205ENST00000581383 SLC26A9Q7LBE3 791 aa4.32□□□□□ -1.72
SMCHD1-205ENST00000581383 GLRX5Q86SX6 157 aa4.32□□□□□ -1.72
SMCHD1-205ENST00000581383 OR11H4Q8NGC9 324 aa4.32□□□□□ -1.72
SMCHD1-205ENST00000581383 HSD17B8Q92506 261 aa4.32□□□□□ -1.72
SMCHD1-205ENST00000581383 SLC47A1Q96FL8 570 aa4.32□□□□□ -1.72
SMCHD1-205ENST00000581383 RAD9AQ99638 391 aa4.32□□□□□ -1.72
SMCHD1-205ENST00000581383 THUMPD3Q9BV44 507 aaKnown RBP4.32□□□□□ -1.72
SMCHD1-205ENST00000581383 GTPBP2Q9BX10 602 aaKnown RBP4.32□□□□□ -1.72
SMCHD1-205ENST00000581383 ECHDC1Q9NTX5 307 aa4.32□□□□□ -1.72
SMCHD1-205ENST00000581383 GTF3C4Q9UKN8 822 aa4.32□□□□□ -1.72
SMCHD1-205ENST00000581383 POMT1Q9Y6A1 747 aa4.32□□□□□ -1.72
SMCHD1-205ENST00000581383 WDR46O15213 610 aaKnown RBP4.31□□□□□ -1.72
SMCHD1-205ENST00000581383 FGF17O60258 216 aa4.31□□□□□ -1.72
SMCHD1-205ENST00000581383 PIGNO95427 931 aa4.31□□□□□ -1.72
SMCHD1-205ENST00000581383 CAVIN2O95810 425 aa4.31□□□□□ -1.72
SMCHD1-205ENST00000581383 CGAP01215 116 aa4.31□□□□□ -1.72
SMCHD1-205ENST00000581383 GBAP04062 536 aa4.31□□□□□ -1.72
SMCHD1-205ENST00000581383 CSN3P07498 182 aa4.31□□□□□ -1.72
SMCHD1-205ENST00000581383 SAGP10523 405 aaPredicted RBP4.31□□□□□ -1.72
SMCHD1-205ENST00000581383 TCF4P15884 667 aa4.31□□□□□ -1.72
SMCHD1-205ENST00000581383 DLX5P56178 289 aa4.31□□□□□ -1.72
SMCHD1-205ENST00000581383 ITGA7Q13683 1181 aa4.31□□□□□ -1.72
SMCHD1-205ENST00000581383 RBBP5Q15291 538 aaKnown RBP4.31□□□□□ -1.72
SMCHD1-205ENST00000581383 ZRSR1Q15695 479 aaKnown RBP4.31□□□□□ -1.72
SMCHD1-205ENST00000581383 UGP2Q16851 508 aa4.31□□□□□ -1.72
SMCHD1-205ENST00000581383 ITPRIPL2Q3MIP1 535 aa4.31□□□□□ -1.72
SMCHD1-205ENST00000581383 UGT3A2Q3SY77 523 aa4.31□□□□□ -1.72
SMCHD1-205ENST00000581383 TECRLQ5HYJ1 363 aa4.31□□□□□ -1.72
SMCHD1-205ENST00000581383 SPDYCQ5MJ68 293 aa4.31□□□□□ -1.72
SMCHD1-205ENST00000581383 CCNYL2Q5T2Q4 361 aa4.31□□□□□ -1.72
SMCHD1-205ENST00000581383 C11orf57Q6ZUT1 292 aaPredicted RBP4.31□□□□□ -1.72
SMCHD1-205ENST00000581383 SPATA21Q7Z572 469 aa4.31□□□□□ -1.72
SMCHD1-205ENST00000581383 ABI3BPQ7Z7G0 1075 aa4.31□□□□□ -1.72
SMCHD1-205ENST00000581383 CDK20Q8IZL9 346 aa4.31□□□□□ -1.72
SMCHD1-205ENST00000581383 LMNTD1Q8N9Z9 388 aa4.31□□□□□ -1.72
SMCHD1-205ENST00000581383 VANGL1Q8TAA9 524 aaPredicted RBP4.31□□□□□ -1.72
SMCHD1-205ENST00000581383 ATP6V1E2Q96A05 226 aa4.31□□□□□ -1.72
SMCHD1-205ENST00000581383 HES6Q96HZ4 224 aa4.31□□□□□ -1.72
SMCHD1-205ENST00000581383 CITED2Q99967 270 aaPredicted RBP4.31□□□□□ -1.72
SMCHD1-205ENST00000581383 SLC2A11Q9BYW1 496 aa4.31□□□□□ -1.72
SMCHD1-205ENST00000581383 MIS12Q9H081 205 aa4.31□□□□□ -1.72
SMCHD1-205ENST00000581383 FN3KQ9H479 309 aa4.31□□□□□ -1.72
SMCHD1-205ENST00000581383 XAB2Q9HCS7 855 aaKnown RBP4.31□□□□□ -1.72
SMCHD1-205ENST00000581383 DNAJC4Q9NNZ3 241 aa4.31□□□□□ -1.72
SMCHD1-205ENST00000581383 CACNG4Q9UBN1 327 aa4.31□□□□□ -1.72
SMCHD1-205ENST00000581383 ZDHHC2Q9UIJ5 367 aa4.31□□□□□ -1.72
SMCHD1-205ENST00000581383 ACAD8Q9UKU7 415 aa4.31□□□□□ -1.72
SMCHD1-205ENST00000581383 RIPK3Q9Y572 518 aa4.31□□□□□ -1.72
SMCHD1-205ENST00000581383 A0A1W2PPK0 400 aa4.3□□□□□ -1.72
SMCHD1-205ENST00000581383 ANKRD61A6NGH8 418 aa4.3□□□□□ -1.72
SMCHD1-205ENST00000581383 FAM86B1E9PN63 330 aa4.3□□□□□ -1.72
SMCHD1-205ENST00000581383 CCDC188H7C350 402 aa4.3□□□□□ -1.72
SMCHD1-205ENST00000581383 BMPR1BO00238 502 aa4.3□□□□□ -1.72
SMCHD1-205ENST00000581383 P2RY10O00398 339 aa4.3□□□□□ -1.72
SMCHD1-205ENST00000581383 DNM1LO00429 736 aa4.3□□□□□ -1.72
SMCHD1-205ENST00000581383 LMX1BO60663 402 aa4.3□□□□□ -1.72
SMCHD1-205ENST00000581383 PRKRAO75569 313 aaKnown RBP4.3□□□□□ -1.72
SMCHD1-205ENST00000581383 TSHBP01222 138 aa4.3□□□□□ -1.72
SMCHD1-205ENST00000581383 FAM86B2P0C5J1 330 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms