RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 TUBGCP3Q96CW5 907 aa12.38□□□□□ -0.43
CDK5RAP3-217ENST00000580287 AKTIPQ9H8T0 292 aa12.38□□□□□ -0.43
CDK5RAP3-217ENST00000580287 RAD18Q9NS91 495 aa12.38□□□□□ -0.43
CDK5RAP3-217ENST00000580287 INVSQ9Y283 1065 aa12.38□□□□□ -0.43
CDK5RAP3-217ENST00000580287 COMMD3-BMI1R4GMX3 469 aa12.38□□□□□ -0.43
CDK5RAP3-217ENST00000580287 POM121BA6NF01 834 aa12.38□□□□□ -0.43
CDK5RAP3-217ENST00000580287 GIPC1O14908 333 aa12.38□□□□□ -0.43
CDK5RAP3-217ENST00000580287 VCLP18206 1134 aa12.38□□□□□ -0.43
CDK5RAP3-217ENST00000580287 RPS21P63220 83 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP3-217ENST00000580287 CDK3Q00526 305 aa12.38□□□□□ -0.43
CDK5RAP3-217ENST00000580287 HERC3Q15034 1050 aa12.38□□□□□ -0.43
CDK5RAP3-217ENST00000580287 ZNF423Q2M1K9 1284 aa12.38□□□□□ -0.43
CDK5RAP3-217ENST00000580287 AAGABQ6PD74 315 aa12.38□□□□□ -0.43
CDK5RAP3-217ENST00000580287 FRA10AC1Q70Z53 315 aa12.38□□□□□ -0.43
CDK5RAP3-217ENST00000580287 CFAP206Q8IYR0 622 aa12.38□□□□□ -0.43
CDK5RAP3-217ENST00000580287 MYO1HQ8N1T3 1032 aa12.38□□□□□ -0.43
CDK5RAP3-217ENST00000580287 HIC2Q96JB3 615 aa12.38□□□□□ -0.43
CDK5RAP3-217ENST00000580287 SEMA6AQ9H2E6 1030 aa12.38□□□□□ -0.43
CDK5RAP3-217ENST00000580287 TRIM39Q9HCM9 518 aa12.38□□□□□ -0.43
CDK5RAP3-217ENST00000580287 MRPL40Q9NQ50 206 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP3-217ENST00000580287 SLC23A2Q9UGH3 650 aa12.38□□□□□ -0.43
CDK5RAP3-217ENST00000580287 PGM3O95394 542 aa12.37□□□□□ -0.43
CDK5RAP3-217ENST00000580287 RGS4P49798 205 aa12.37□□□□□ -0.43
CDK5RAP3-217ENST00000580287 INHBCP55103 352 aa12.37□□□□□ -0.43
CDK5RAP3-217ENST00000580287 LCP2Q13094 533 aa12.37□□□□□ -0.43
CDK5RAP3-217ENST00000580287 STX5Q13190 355 aa12.37□□□□□ -0.43
CDK5RAP3-217ENST00000580287 RPS6KA2Q15349 733 aa12.37□□□□□ -0.43
CDK5RAP3-217ENST00000580287 MAPRE2Q15555 327 aa12.37□□□□□ -0.43
CDK5RAP3-217ENST00000580287 TMEM259Q4ZIN3 620 aa12.37□□□□□ -0.43
CDK5RAP3-217ENST00000580287 PIGGQ5H8A4 983 aa12.37□□□□□ -0.43
CDK5RAP3-217ENST00000580287 GPR153Q6NV75 609 aa12.37□□□□□ -0.43
CDK5RAP3-217ENST00000580287 SCIMPQ6UWF3 145 aa12.37□□□□□ -0.43
CDK5RAP3-217ENST00000580287 CYP2R1Q6VVX0 501 aa12.37□□□□□ -0.43
CDK5RAP3-217ENST00000580287 CHSY3Q70JA7 882 aa12.37□□□□□ -0.43
CDK5RAP3-217ENST00000580287 LARP4Q71RC2 724 aaKnown RBP eCLIP12.37□□□□□ -0.43
CDK5RAP3-217ENST00000580287 DEFB119Q8N690 84 aa12.37□□□□□ -0.43
CDK5RAP3-217ENST00000580287 LMNTD1Q8N9Z9 388 aa12.37□□□□□ -0.43
CDK5RAP3-217ENST00000580287 TP53I13Q8NBR0 393 aaPredicted RBP12.37□□□□□ -0.43
CDK5RAP3-217ENST00000580287 ASB2Q96Q27 587 aa12.37□□□□□ -0.43
CDK5RAP3-217ENST00000580287 C1QTNF2Q9BXJ5 285 aa12.37□□□□□ -0.43
CDK5RAP3-217ENST00000580287 IL1RL2Q9HB29 575 aa12.37□□□□□ -0.43
CDK5RAP3-217ENST00000580287 KCTD5Q9NXV2 234 aa12.37□□□□□ -0.43
CDK5RAP3-217ENST00000580287 MUTYHQ9UIF7 546 aa12.37□□□□□ -0.43
CDK5RAP3-217ENST00000580287 CYP8B1Q9UNU6 501 aa12.37□□□□□ -0.43
CDK5RAP3-217ENST00000580287 ZNF106Q9H2Y7 1883 aaKnown RBP12.37□□□□□ -0.43
CDK5RAP3-217ENST00000580287 MAN2B1O00754 1011 aa12.37□□□□□ -0.43
CDK5RAP3-217ENST00000580287 LILRB5O75023 590 aa12.37□□□□□ -0.43
CDK5RAP3-217ENST00000580287 OR6B1O95007 311 aa12.37□□□□□ -0.43
CDK5RAP3-217ENST00000580287 SNRPB2P08579 225 aaKnown RBP12.37□□□□□ -0.43
CDK5RAP3-217ENST00000580287 ALDOCP09972 364 aaKnown RBP12.37□□□□□ -0.43
CDK5RAP3-217ENST00000580287 ME2P23368 584 aa12.37□□□□□ -0.43
CDK5RAP3-217ENST00000580287 PRDX3P30048 256 aaKnown RBP12.37□□□□□ -0.43
CDK5RAP3-217ENST00000580287 NFE2L1Q14494 772 aa12.37□□□□□ -0.43
CDK5RAP3-217ENST00000580287 TLR1Q15399 786 aa12.37□□□□□ -0.43
CDK5RAP3-217ENST00000580287 UGT3A2Q3SY77 523 aa12.37□□□□□ -0.43
CDK5RAP3-217ENST00000580287 REP15Q6BDI9 236 aa12.37□□□□□ -0.43
CDK5RAP3-217ENST00000580287 ZNF765Q7L2R6 523 aa12.37□□□□□ -0.43
CDK5RAP3-217ENST00000580287 NLRP8Q86W28 1048 aa12.37□□□□□ -0.43
CDK5RAP3-217ENST00000580287 SPATA24Q86W54 205 aa12.37□□□□□ -0.43
CDK5RAP3-217ENST00000580287 HORMAD1Q86X24 394 aa12.37□□□□□ -0.43
CDK5RAP3-217ENST00000580287 NECAB3Q96P71 396 aaPredicted RBP12.37□□□□□ -0.43
CDK5RAP3-217ENST00000580287 HGH1Q9BTY7 390 aa12.37□□□□□ -0.43
CDK5RAP3-217ENST00000580287 LTB4R2Q9NPC1 389 aa12.37□□□□□ -0.43
CDK5RAP3-217ENST00000580287 EIF2B4Q9UI10 523 aaKnown RBP12.37□□□□□ -0.43
CDK5RAP3-217ENST00000580287 NCKAP1Q9Y2A7 1128 aa12.37□□□□□ -0.43
CDK5RAP3-217ENST00000580287 NR5A2O00482 541 aa12.36□□□□□ -0.43
CDK5RAP3-217ENST00000580287 POP7O75817 140 aaKnown RBP12.36□□□□□ -0.43
CDK5RAP3-217ENST00000580287 DCNP07585 359 aaKnown RBP12.36□□□□□ -0.43
CDK5RAP3-217ENST00000580287 NELFEP18615 380 aaKnown RBP12.36□□□□□ -0.43
CDK5RAP3-217ENST00000580287 PSME3P61289 254 aa12.36□□□□□ -0.43
CDK5RAP3-217ENST00000580287 GRB7Q14451 532 aa12.36□□□□□ -0.43
CDK5RAP3-217ENST00000580287 ZXDCQ2QGD7 858 aaPredicted RBP12.36□□□□□ -0.43
CDK5RAP3-217ENST00000580287 CCSMST1Q4G0I0 132 aa12.36□□□□□ -0.43
CDK5RAP3-217ENST00000580287 FAM83HQ6ZRV2 1179 aaPredicted RBP12.36□□□□□ -0.43
CDK5RAP3-217ENST00000580287 PQLC1Q8N2U9 271 aa12.36□□□□□ -0.43
CDK5RAP3-217ENST00000580287 STON2Q8WXE9 905 aa12.36□□□□□ -0.43
CDK5RAP3-217ENST00000580287 PDLIM5Q96HC4 596 aaKnown RBP12.36□□□□□ -0.43
CDK5RAP3-217ENST00000580287 FAM210AQ96ND0 272 aa12.36□□□□□ -0.43
CDK5RAP3-217ENST00000580287 NRTNQ99748 197 aa12.36□□□□□ -0.43
CDK5RAP3-217ENST00000580287 MOSPD1Q9UJG1 213 aa12.36□□□□□ -0.43
CDK5RAP3-217ENST00000580287 PLXNA2O75051 1894 aa12.36□□□□□ -0.43
CDK5RAP3-217ENST00000580287 A0A1B0GTW7 788 aa12.36□□□□□ -0.43
CDK5RAP3-217ENST00000580287 KANSL1LA0AUZ9 987 aa12.36□□□□□ -0.43
CDK5RAP3-217ENST00000580287 E7ENX8 843 aa12.36□□□□□ -0.43
CDK5RAP3-217ENST00000580287 MRASO14807 208 aa12.36□□□□□ -0.43
CDK5RAP3-217ENST00000580287 FFAR2O15552 330 aa12.36□□□□□ -0.43
CDK5RAP3-217ENST00000580287 ATG13O75143 517 aa12.36□□□□□ -0.43
CDK5RAP3-217ENST00000580287 PABPC4LP0CB38 370 aaKnown RBP12.36□□□□□ -0.43
CDK5RAP3-217ENST00000580287 HGFP14210 728 aa12.36□□□□□ -0.43
CDK5RAP3-217ENST00000580287 IGFALSP35858 605 aa12.36□□□□□ -0.43
CDK5RAP3-217ENST00000580287 PRLHRP49683 370 aa12.36□□□□□ -0.43
CDK5RAP3-217ENST00000580287 FOLH1Q04609 750 aa12.36□□□□□ -0.43
CDK5RAP3-217ENST00000580287 MED21Q13503 144 aa12.36□□□□□ -0.43
CDK5RAP3-217ENST00000580287 TTLL9Q3SXZ7 439 aa12.36□□□□□ -0.43
CDK5RAP3-217ENST00000580287 XKR5Q6UX68 686 aa12.36□□□□□ -0.43
CDK5RAP3-217ENST00000580287 ATP6V1E2Q96A05 226 aa12.36□□□□□ -0.43
CDK5RAP3-217ENST00000580287 FAM131CQ96AQ9 280 aa12.36□□□□□ -0.43
CDK5RAP3-217ENST00000580287 COX14Q96I36 57 aa12.36□□□□□ -0.43
CDK5RAP3-217ENST00000580287 EGFL8Q99944 293 aa12.36□□□□□ -0.43
CDK5RAP3-217ENST00000580287 PKP2Q99959 881 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms