RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 KRT222Q8N1A0 295 aa11.93□□□□□ -0.5
CTDNEP1-205ENST00000570828 PRELID2Q8N945 189 aa11.93□□□□□ -0.5
CTDNEP1-205ENST00000570828 SKA2Q8WVK7 121 aaPredicted RBP11.93□□□□□ -0.5
CTDNEP1-205ENST00000570828 C17orf62Q9BQA9 187 aa11.93□□□□□ -0.5
CTDNEP1-205ENST00000570828 KIFC1Q9BW19 673 aa11.93□□□□□ -0.5
CTDNEP1-205ENST00000570828 NLNQ9BYT8 704 aa11.93□□□□□ -0.5
CTDNEP1-205ENST00000570828 CHRNA10Q9GZZ6 450 aa11.93□□□□□ -0.5
CTDNEP1-205ENST00000570828 MRM3Q9HC36 420 aaKnown RBP11.93□□□□□ -0.5
CTDNEP1-205ENST00000570828 IRAK4Q9NWZ3 460 aa11.93□□□□□ -0.5
CTDNEP1-205ENST00000570828 SYBUQ9NX95 663 aa11.93□□□□□ -0.5
CTDNEP1-205ENST00000570828 TLK1Q9UKI8 766 aa11.93□□□□□ -0.5
CTDNEP1-205ENST00000570828 CDYLQ9Y232 598 aa11.93□□□□□ -0.5
CTDNEP1-205ENST00000570828 PADI2Q9Y2J8 665 aa11.93□□□□□ -0.5
CTDNEP1-205ENST00000570828 AP1M2Q9Y6Q5 423 aa11.93□□□□□ -0.5
CTDNEP1-205ENST00000570828 ARGFXA6NJG6 315 aa11.92□□□□□ -0.5
CTDNEP1-205ENST00000570828 KPNA5O15131 536 aa11.92□□□□□ -0.5
CTDNEP1-205ENST00000570828 ZSCAN9O15535 394 aaPredicted RBP11.92□□□□□ -0.5
CTDNEP1-205ENST00000570828 DNAJB5O75953 348 aa11.92□□□□□ -0.5
CTDNEP1-205ENST00000570828 SLCO2B1O94956 709 aa11.92□□□□□ -0.5
CTDNEP1-205ENST00000570828 VAPBO95292 243 aa11.92□□□□□ -0.5
CTDNEP1-205ENST00000570828 NR1D1P20393 614 aa11.92□□□□□ -0.5
CTDNEP1-205ENST00000570828 RPS3P23396 243 aaKnown RBP eCLIP11.92□□□□□ -0.5
CTDNEP1-205ENST00000570828 AOAHP28039 575 aa11.92□□□□□ -0.5
CTDNEP1-205ENST00000570828 TERF1P54274 439 aa11.92□□□□□ -0.5
CTDNEP1-205ENST00000570828 EIF3BP55884 814 aaKnown RBP11.92□□□□□ -0.5
CTDNEP1-205ENST00000570828 KLRB1Q12918 225 aa11.92□□□□□ -0.5
CTDNEP1-205ENST00000570828 GPS1Q13098 491 aa11.92□□□□□ -0.5
CTDNEP1-205ENST00000570828 NCF4Q15080 339 aa11.92□□□□□ -0.5
CTDNEP1-205ENST00000570828 ZIC1Q15915 447 aa11.92□□□□□ -0.5
CTDNEP1-205ENST00000570828 KYNUQ16719 465 aa11.92□□□□□ -0.5
CTDNEP1-205ENST00000570828 CPZQ66K79 652 aa11.92□□□□□ -0.5
CTDNEP1-205ENST00000570828 LCN10Q6JVE6 187 aa11.92□□□□□ -0.5
CTDNEP1-205ENST00000570828 CASC4Q6P4E1 433 aa11.92□□□□□ -0.5
CTDNEP1-205ENST00000570828 TTC23LQ6PF05 361 aa11.92□□□□□ -0.5
CTDNEP1-205ENST00000570828 ASB18Q6ZVZ8 466 aa11.92□□□□□ -0.5
CTDNEP1-205ENST00000570828 OTOAQ7RTW8 1153 aa11.92□□□□□ -0.5
CTDNEP1-205ENST00000570828 SDCCAG8Q86SQ7 713 aaPredicted RBP11.92□□□□□ -0.5
CTDNEP1-205ENST00000570828 FLVCR1-AS1Q8TAF5 88 aa11.92□□□□□ -0.5
CTDNEP1-205ENST00000570828 SLC22A18Q96BI1 424 aa11.92□□□□□ -0.5
CTDNEP1-205ENST00000570828 MFSD3Q96ES6 412 aa11.92□□□□□ -0.5
CTDNEP1-205ENST00000570828 RAB11FIP5Q9BXF6 653 aa11.92□□□□□ -0.5
CTDNEP1-205ENST00000570828 P2RY12Q9H244 342 aa11.92□□□□□ -0.5
CTDNEP1-205ENST00000570828 FAM60AQ9NP50 221 aa11.92□□□□□ -0.5
CTDNEP1-205ENST00000570828 ACSS2Q9NR19 701 aa11.92□□□□□ -0.5
CTDNEP1-205ENST00000570828 CIDEBQ9UHD4 219 aa11.92□□□□□ -0.5
CTDNEP1-205ENST00000570828 TCFL5Q9UL49 500 aa11.92□□□□□ -0.5
CTDNEP1-205ENST00000570828 SLC39A10Q9ULF5 831 aa11.92□□□□□ -0.5
CTDNEP1-205ENST00000570828 SOX13Q9UN79 622 aa11.92□□□□□ -0.5
CTDNEP1-205ENST00000570828 SRPK3Q9UPE1 567 aa11.92□□□□□ -0.5
CTDNEP1-205ENST00000570828 MRFAP1Q9Y605 127 aa11.92□□□□□ -0.5
CTDNEP1-205ENST00000570828 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.91□□□□□ -0.5
CTDNEP1-205ENST00000570828 TCRBV7S3A2A0A539 114 aa11.91□□□□□ -0.5
CTDNEP1-205ENST00000570828 PAMP19021 973 aa11.91□□□□□ -0.5
CTDNEP1-205ENST00000570828 MAGP20916 626 aa11.91□□□□□ -0.5
CTDNEP1-205ENST00000570828 CD9P21926 228 aa11.91□□□□□ -0.5
CTDNEP1-205ENST00000570828 ARNTP27540 789 aa11.91□□□□□ -0.5
CTDNEP1-205ENST00000570828 PEBP1P30086 187 aaKnown RBP11.91□□□□□ -0.5
CTDNEP1-205ENST00000570828 PTGIRP43119 386 aa11.91□□□□□ -0.5
CTDNEP1-205ENST00000570828 CHAF1BQ13112 559 aa11.91□□□□□ -0.5
CTDNEP1-205ENST00000570828 KCNJ11Q14654 390 aa11.91□□□□□ -0.5
CTDNEP1-205ENST00000570828 KCTD19Q17RG1 926 aaPredicted RBP11.91□□□□□ -0.5
CTDNEP1-205ENST00000570828 ARMC3Q5W041 872 aa11.91□□□□□ -0.5
CTDNEP1-205ENST00000570828 RHBDD2Q6NTF9 364 aa11.91□□□□□ -0.5
CTDNEP1-205ENST00000570828 CES3Q6UWW8 571 aa11.91□□□□□ -0.5
CTDNEP1-205ENST00000570828 TAX1BP1Q86VP1 789 aa11.91□□□□□ -0.5
CTDNEP1-205ENST00000570828 RAB42Q8N4Z0 105 aa11.91□□□□□ -0.5
CTDNEP1-205ENST00000570828 TEX19Q8NA77 164 aa11.91□□□□□ -0.5
CTDNEP1-205ENST00000570828 LINC01555Q8NAE3 123 aa11.91□□□□□ -0.5
CTDNEP1-205ENST00000570828 PROKR1Q8TCW9 393 aa11.91□□□□□ -0.5
CTDNEP1-205ENST00000570828 MAGOHBQ96A72 148 aaKnown RBP11.91□□□□□ -0.5
CTDNEP1-205ENST00000570828 PBKQ96KB5 322 aa11.91□□□□□ -0.5
CTDNEP1-205ENST00000570828 FOPNLQ96NB1 174 aa11.91□□□□□ -0.5
CTDNEP1-205ENST00000570828 IL17FQ96PD4 163 aa11.91□□□□□ -0.5
CTDNEP1-205ENST00000570828 NAP1L3Q99457 506 aaPredicted RBP11.91□□□□□ -0.5
CTDNEP1-205ENST00000570828 DHRS4Q9BTZ2 278 aa11.91□□□□□ -0.5
CTDNEP1-205ENST00000570828 TRIM55Q9BYV6 548 aa11.91□□□□□ -0.5
CTDNEP1-205ENST00000570828 ING2Q9H160 280 aa11.91□□□□□ -0.5
CTDNEP1-205ENST00000570828 TXLNGQ9NUQ3 528 aa11.91□□□□□ -0.5
CTDNEP1-205ENST00000570828 INTS7Q9NVH2 962 aaKnown RBP11.91□□□□□ -0.5
CTDNEP1-205ENST00000570828 SAMD15Q9P1V8 674 aa11.91□□□□□ -0.5
CTDNEP1-205ENST00000570828 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.91□□□□□ -0.5
CTDNEP1-205ENST00000570828 GPN3Q9UHW5 284 aaPredicted RBP11.91□□□□□ -0.5
CTDNEP1-205ENST00000570828 G3BP2Q9UN86 482 aaKnown RBP11.91□□□□□ -0.5
CTDNEP1-205ENST00000570828 JRKLQ9Y4A0 524 aa11.91□□□□□ -0.5
CTDNEP1-205ENST00000570828 GOLGA8KD6RF30 607 aa11.9□□□□□ -0.5
CTDNEP1-205ENST00000570828 H3BMM5 538 aa11.9□□□□□ -0.5
CTDNEP1-205ENST00000570828 GOLGA8TH3BQL2 631 aa11.9□□□□□ -0.5
CTDNEP1-205ENST00000570828 RASGRF2O14827 1237 aa11.9□□□□□ -0.5
CTDNEP1-205ENST00000570828 HCRTR1O43613 425 aa11.9□□□□□ -0.5
CTDNEP1-205ENST00000570828 KRT14P02533 472 aa11.9□□□□□ -0.5
CTDNEP1-205ENST00000570828 CAPN1P07384 714 aa11.9□□□□□ -0.5
CTDNEP1-205ENST00000570828 OGNP20774 298 aaKnown RBP11.9□□□□□ -0.5
CTDNEP1-205ENST00000570828 CCNFP41002 786 aa11.9□□□□□ -0.5
CTDNEP1-205ENST00000570828 MAGEA6P43360 314 aa11.9□□□□□ -0.5
CTDNEP1-205ENST00000570828 GABRA4P48169 554 aa11.9□□□□□ -0.5
CTDNEP1-205ENST00000570828 PGDP52209 483 aa11.9□□□□□ -0.5
CTDNEP1-205ENST00000570828 TYSND1Q2T9J0 566 aa11.9□□□□□ -0.5
CTDNEP1-205ENST00000570828 CTSL3PQ5NE16 218 aa11.9□□□□□ -0.5
CTDNEP1-205ENST00000570828 C1orf189Q5VU69 101 aa11.9□□□□□ -0.5
CTDNEP1-205ENST00000570828 FAM69BQ5VUD6 431 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms