RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 PCID2Q5JVF3 399 aa17.92■□□□□ 0.46
LINC01238-205ENST00000567549 DCAF10Q5QP82 559 aa17.92■□□□□ 0.46
LINC01238-205ENST00000567549 PTRHD1Q6GMV3 140 aaKnown RBP17.92■□□□□ 0.46
LINC01238-205ENST00000567549 TRIM73Q86UV7 250 aa17.92■□□□□ 0.46
LINC01238-205ENST00000567549 ZNF655Q8N720 491 aaPredicted RBP17.92■□□□□ 0.46
LINC01238-205ENST00000567549 TTC29Q8NA56 475 aaPredicted RBP17.92■□□□□ 0.46
LINC01238-205ENST00000567549 NUDT9Q9BW91 350 aa17.92■□□□□ 0.46
LINC01238-205ENST00000567549 MRM3Q9HC36 420 aaKnown RBP17.92■□□□□ 0.46
LINC01238-205ENST00000567549 FAM60AQ9NP50 221 aa17.92■□□□□ 0.46
LINC01238-205ENST00000567549 ATP13A2Q9NQ11 1180 aa17.92■□□□□ 0.46
LINC01238-205ENST00000567549 EIF2B3Q9NR50 452 aaKnown RBP17.92■□□□□ 0.46
LINC01238-205ENST00000567549 EURLQ9NYK6 297 aa17.92■□□□□ 0.46
LINC01238-205ENST00000567549 FAM169AQ9Y6X4 670 aa17.92■□□□□ 0.46
LINC01238-205ENST00000567549 ESPL1Q14674 2120 aa17.92■□□□□ 0.46
LINC01238-205ENST00000567549 A0A1B0GX78 115 aa17.91■□□□□ 0.46
LINC01238-205ENST00000567549 BLACEA4D250 179 aa17.91■□□□□ 0.46
LINC01238-205ENST00000567549 OR51F1A6NGY5 319 aa17.91■□□□□ 0.46
LINC01238-205ENST00000567549 KLF7O75840 302 aaPredicted RBP17.91■□□□□ 0.46
LINC01238-205ENST00000567549 DDAH2O95865 285 aa17.91■□□□□ 0.46
LINC01238-205ENST00000567549 ALBP02768 609 aa17.91■□□□□ 0.46
LINC01238-205ENST00000567549 CBSLP0DN79 551 aa17.91■□□□□ 0.46
LINC01238-205ENST00000567549 GNLYP22749 145 aa17.91■□□□□ 0.46
LINC01238-205ENST00000567549 CBSP35520 551 aa17.91■□□□□ 0.46
LINC01238-205ENST00000567549 CCNFP41002 786 aa17.91■□□□□ 0.46
LINC01238-205ENST00000567549 GRM7Q14831 915 aa17.91■□□□□ 0.46
LINC01238-205ENST00000567549 OASLQ15646 514 aaKnown RBP17.91■□□□□ 0.46
LINC01238-205ENST00000567549 DEFB110Q30KQ9 67 aa17.91■□□□□ 0.46
LINC01238-205ENST00000567549 FAM214AQ32MH5 1076 aa17.91■□□□□ 0.46
LINC01238-205ENST00000567549 C1orf189Q5VU69 101 aa17.91■□□□□ 0.46
LINC01238-205ENST00000567549 SLC6A19Q695T7 634 aa17.91■□□□□ 0.46
LINC01238-205ENST00000567549 SLC13A5Q86YT5 568 aaPredicted RBP17.91■□□□□ 0.46
LINC01238-205ENST00000567549 GALNT16Q8N428 558 aa17.91■□□□□ 0.46
LINC01238-205ENST00000567549 ZADH2Q8N4Q0 377 aa17.91■□□□□ 0.46
LINC01238-205ENST00000567549 DNAJC22Q8N4W6 341 aa17.91■□□□□ 0.46
LINC01238-205ENST00000567549 OR2L8Q8NGY9 312 aa17.91■□□□□ 0.46
LINC01238-205ENST00000567549 SSC4DQ8WTU2 575 aa17.91■□□□□ 0.46
LINC01238-205ENST00000567549 ATG4AQ8WYN0 398 aa17.91■□□□□ 0.46
LINC01238-205ENST00000567549 RAD51AP1Q96B01 352 aa17.91■□□□□ 0.46
LINC01238-205ENST00000567549 PSMG3-AS1Q96PY0 264 aa17.91■□□□□ 0.46
LINC01238-205ENST00000567549 IL22Q9GZX6 179 aa17.91■□□□□ 0.46
LINC01238-205ENST00000567549 SPRTNQ9H040 489 aaPredicted RBP17.91■□□□□ 0.46
LINC01238-205ENST00000567549 WDR54Q9H977 334 aa17.91■□□□□ 0.46
LINC01238-205ENST00000567549 CASS4Q9NQ75 786 aa17.91■□□□□ 0.46
LINC01238-205ENST00000567549 SPHK1Q9NYA1 384 aa17.91■□□□□ 0.46
LINC01238-205ENST00000567549 BFARQ9NZS9 450 aa17.91■□□□□ 0.46
LINC01238-205ENST00000567549 B3GNT3Q9Y2A9 372 aa17.91■□□□□ 0.46
LINC01238-205ENST00000567549 ZKSCAN5Q9Y2L8 839 aa17.91■□□□□ 0.46
LINC01238-205ENST00000567549 ESPNB1AK53 854 aa17.9■□□□□ 0.46
LINC01238-205ENST00000567549 TARM1B6A8C7 271 aa17.9■□□□□ 0.46
LINC01238-205ENST00000567549 H3BMM5 538 aa17.9■□□□□ 0.46
LINC01238-205ENST00000567549 OR1I1O60431 355 aa17.9■□□□□ 0.46
LINC01238-205ENST00000567549 GPC4O75487 556 aa17.9■□□□□ 0.46
LINC01238-205ENST00000567549 NDUFS3O75489 264 aa17.9■□□□□ 0.46
LINC01238-205ENST00000567549 ALAS2P22557 587 aa17.9■□□□□ 0.46
LINC01238-205ENST00000567549 CCR7P32248 378 aa17.9■□□□□ 0.46
LINC01238-205ENST00000567549 GABRA4P48169 554 aa17.9■□□□□ 0.46
LINC01238-205ENST00000567549 CSE1LP55060 971 aaKnown RBP17.9■□□□□ 0.46
LINC01238-205ENST00000567549 AIMP2Q13155 320 aaKnown RBP17.9■□□□□ 0.46
LINC01238-205ENST00000567549 ELOAQ14241 798 aaKnown RBP17.9■□□□□ 0.46
LINC01238-205ENST00000567549 SF1Q15637 639 aaKnown RBP17.9■□□□□ 0.46
LINC01238-205ENST00000567549 RNF187Q5TA31 235 aaPredicted RBP17.9■□□□□ 0.46
LINC01238-205ENST00000567549 ARMC3Q5W041 872 aa17.9■□□□□ 0.46
LINC01238-205ENST00000567549 OTOAQ7RTW8 1153 aa17.9■□□□□ 0.46
LINC01238-205ENST00000567549 SDCCAG8Q86SQ7 713 aaPredicted RBP17.9■□□□□ 0.46
LINC01238-205ENST00000567549 CFAP61Q8NHU2 1237 aa17.9■□□□□ 0.46
LINC01238-205ENST00000567549 SKA2Q8WVK7 121 aaPredicted RBP17.9■□□□□ 0.46
LINC01238-205ENST00000567549 ZUFSPQ96AP4 578 aa17.9■□□□□ 0.46
LINC01238-205ENST00000567549 ILKAPQ9H0C8 392 aaPredicted RBP17.9■□□□□ 0.46
LINC01238-205ENST00000567549 HOMER3Q9NSC5 361 aa17.9■□□□□ 0.46
LINC01238-205ENST00000567549 P4HTMQ9NXG6 502 aa17.9■□□□□ 0.46
LINC01238-205ENST00000567549 DHCR7Q9UBM7 475 aaKnown RBP17.9■□□□□ 0.46
LINC01238-205ENST00000567549 DRG1Q9Y295 367 aaKnown RBP17.9■□□□□ 0.46
LINC01238-205ENST00000567549 COL12A1Q99715 3063 aa17.9■□□□□ 0.46
LINC01238-205ENST00000567549 RASGRF2O14827 1237 aa17.89■□□□□ 0.45
LINC01238-205ENST00000567549 CD3EAPO15446 510 aaKnown RBP17.89■□□□□ 0.45
LINC01238-205ENST00000567549 SLCO2B1O94956 709 aa17.89■□□□□ 0.45
LINC01238-205ENST00000567549 MAGP20916 626 aa17.89■□□□□ 0.45
LINC01238-205ENST00000567549 NPY2RP49146 381 aa17.89■□□□□ 0.45
LINC01238-205ENST00000567549 SOX8P57073 446 aa17.89■□□□□ 0.45
LINC01238-205ENST00000567549 SARNPP82979 210 aaKnown RBP17.89■□□□□ 0.45
LINC01238-205ENST00000567549 CDK16Q00536 496 aa17.89■□□□□ 0.45
LINC01238-205ENST00000567549 RPS6KA1Q15418 735 aa17.89■□□□□ 0.45
LINC01238-205ENST00000567549 ZIC1Q15915 447 aa17.89■□□□□ 0.45
LINC01238-205ENST00000567549 CCNG2Q16589 344 aa17.89■□□□□ 0.45
LINC01238-205ENST00000567549 MRNIPQ6NTE8 343 aa17.89■□□□□ 0.45
LINC01238-205ENST00000567549 IGFL3Q6UXB1 125 aa17.89■□□□□ 0.45
LINC01238-205ENST00000567549 GSTA5Q7RTV2 222 aa17.89■□□□□ 0.45
LINC01238-205ENST00000567549 MCATQ8IVS2 390 aaKnown RBP17.89■□□□□ 0.45
LINC01238-205ENST00000567549 OTUD6BQ8N6M0 293 aa17.89■□□□□ 0.45
LINC01238-205ENST00000567549 DESI2Q9BSY9 194 aa17.89■□□□□ 0.45
LINC01238-205ENST00000567549 VPS9D1Q9Y2B5 631 aa17.89■□□□□ 0.45
LINC01238-205ENST00000567549 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.89■□□□□ 0.45
LINC01238-205ENST00000567549 CAPN6Q9Y6Q1 641 aa17.89■□□□□ 0.45
LINC01238-205ENST00000567549 ANKRD12Q6UB98 2062 aa17.89■□□□□ 0.45
LINC01238-205ENST00000567549 TCRBV7S2A1N4TA0A589 114 aa17.88■□□□□ 0.45
LINC01238-205ENST00000567549 H3BMH7 237 aa17.88■□□□□ 0.45
LINC01238-205ENST00000567549 AGPSO00116 658 aa17.88■□□□□ 0.45
LINC01238-205ENST00000567549 DSCR3O14972 297 aa17.88■□□□□ 0.45
LINC01238-205ENST00000567549 SRPX2O60687 465 aaPredicted RBP17.88■□□□□ 0.45
LINC01238-205ENST00000567549 RPS3P23396 243 aaKnown RBP eCLIP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms