RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 LMX1BO60663 402 aa4.11□□□□□ -1.75
CHD9-215ENST00000565442 KRT36O76013 467 aa4.11□□□□□ -1.75
CHD9-215ENST00000565442 ZNF432O94892 652 aa4.11□□□□□ -1.75
CHD9-215ENST00000565442 HAPLN1P10915 354 aaPredicted RBP4.11□□□□□ -1.75
CHD9-215ENST00000565442 FGF5P12034 268 aa4.11□□□□□ -1.75
CHD9-215ENST00000565442 NR2C2P49116 596 aa4.11□□□□□ -1.75
CHD9-215ENST00000565442 UBASH3AP57075 661 aa4.11□□□□□ -1.75
CHD9-215ENST00000565442 LGALS3BPQ08380 585 aa4.11□□□□□ -1.75
CHD9-215ENST00000565442 VEZF1Q14119 521 aa4.11□□□□□ -1.75
CHD9-215ENST00000565442 UGP2Q16851 508 aa4.11□□□□□ -1.75
CHD9-215ENST00000565442 WDR38Q5JTN6 314 aa4.11□□□□□ -1.75
CHD9-215ENST00000565442 C11orf63Q6NUN7 778 aa4.11□□□□□ -1.75
CHD9-215ENST00000565442 SLC26A9Q7LBE3 791 aa4.11□□□□□ -1.75
CHD9-215ENST00000565442 SMIM29Q86T20 159 aa4.11□□□□□ -1.75
CHD9-215ENST00000565442 FAM219AQ8IW50 185 aa4.11□□□□□ -1.75
CHD9-215ENST00000565442 CDK20Q8IZL9 346 aa4.11□□□□□ -1.75
CHD9-215ENST00000565442 OR11H4Q8NGC9 324 aa4.11□□□□□ -1.75
CHD9-215ENST00000565442 GRHL3Q8TE85 626 aa4.11□□□□□ -1.75
CHD9-215ENST00000565442 HSD17B8Q92506 261 aa4.11□□□□□ -1.75
CHD9-215ENST00000565442 RMDN2Q96LZ7 410 aa4.11□□□□□ -1.75
CHD9-215ENST00000565442 FERMT1Q9BQL6 677 aa4.11□□□□□ -1.75
CHD9-215ENST00000565442 ZNF701Q9NV72 531 aaPredicted RBP4.11□□□□□ -1.75
CHD9-215ENST00000565442 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.11□□□□□ -1.75
CHD9-215ENST00000565442 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.11□□□□□ -1.75
CHD9-215ENST00000565442 CACNG4Q9UBN1 327 aa4.11□□□□□ -1.75
CHD9-215ENST00000565442 POLLQ9UGP5 575 aa4.11□□□□□ -1.75
CHD9-215ENST00000565442 KCNG2Q9UJ96 466 aa4.11□□□□□ -1.75
CHD9-215ENST00000565442 TRAV34A0A0B4J273 112 aa4.1□□□□□ -1.75
CHD9-215ENST00000565442 ANXA2P2A6NMY6 339 aa4.1□□□□□ -1.75
CHD9-215ENST00000565442 P2RY10O00398 339 aa4.1□□□□□ -1.75
CHD9-215ENST00000565442 DNM1LO00429 736 aa4.1□□□□□ -1.75
CHD9-215ENST00000565442 CLIC2O15247 247 aa4.1□□□□□ -1.75
CHD9-215ENST00000565442 CIDEAO60543 219 aa4.1□□□□□ -1.75
CHD9-215ENST00000565442 RNASEH1O60930 286 aaKnown RBP4.1□□□□□ -1.75
CHD9-215ENST00000565442 CGAP01215 116 aa4.1□□□□□ -1.75
CHD9-215ENST00000565442 TSHBP01222 138 aa4.1□□□□□ -1.75
CHD9-215ENST00000565442 INHBAP08476 426 aa4.1□□□□□ -1.75
CHD9-215ENST00000565442 PTGER4P35408 488 aa4.1□□□□□ -1.75
CHD9-215ENST00000565442 DCTP40126 519 aa4.1□□□□□ -1.75
CHD9-215ENST00000565442 CRKLP46109 303 aaKnown RBP4.1□□□□□ -1.75
CHD9-215ENST00000565442 CAPZA1P52907 286 aa4.1□□□□□ -1.75
CHD9-215ENST00000565442 B3GALT5-AS1P59052 145 aa4.1□□□□□ -1.75
CHD9-215ENST00000565442 CUL3Q13618 768 aa4.1□□□□□ -1.75
CHD9-215ENST00000565442 ITGA7Q13683 1181 aa4.1□□□□□ -1.75
CHD9-215ENST00000565442 ITPRIPL2Q3MIP1 535 aa4.1□□□□□ -1.75
CHD9-215ENST00000565442 ALDH1L2Q3SY69 923 aa4.1□□□□□ -1.75
CHD9-215ENST00000565442 MCMDC2Q4G0Z9 681 aa4.1□□□□□ -1.75
CHD9-215ENST00000565442 TECRLQ5HYJ1 363 aa4.1□□□□□ -1.75
CHD9-215ENST00000565442 SPDYCQ5MJ68 293 aa4.1□□□□□ -1.75
CHD9-215ENST00000565442 CCNYL2Q5T2Q4 361 aa4.1□□□□□ -1.75
CHD9-215ENST00000565442 HECTD3Q5T447 861 aa4.1□□□□□ -1.75
CHD9-215ENST00000565442 C19orf48Q6RUI8 117 aa4.1□□□□□ -1.75
CHD9-215ENST00000565442 PET117Q6UWS5 81 aa4.1□□□□□ -1.75
CHD9-215ENST00000565442 ANKRD23Q86SG2 305 aa4.1□□□□□ -1.75
CHD9-215ENST00000565442 ZNF843Q8N446 348 aa4.1□□□□□ -1.75
CHD9-215ENST00000565442 FCAMRQ8WWV6 532 aa4.1□□□□□ -1.75
CHD9-215ENST00000565442 NSL1Q96IY1 281 aa4.1□□□□□ -1.75
CHD9-215ENST00000565442 RAD9AQ99638 391 aa4.1□□□□□ -1.75
CHD9-215ENST00000565442 ADPGKQ9BRR6 497 aa4.1□□□□□ -1.75
CHD9-215ENST00000565442 CDH20Q9HBT6 801 aa4.1□□□□□ -1.75
CHD9-215ENST00000565442 ECHDC1Q9NTX5 307 aa4.1□□□□□ -1.75
CHD9-215ENST00000565442 COQ3Q9NZJ6 369 aa4.1□□□□□ -1.75
CHD9-215ENST00000565442 ZDHHC2Q9UIJ5 367 aa4.1□□□□□ -1.75
CHD9-215ENST00000565442 ACAD8Q9UKU7 415 aa4.1□□□□□ -1.75
CHD9-215ENST00000565442 RIPK3Q9Y572 518 aa4.1□□□□□ -1.75
CHD9-215ENST00000565442 POMT1Q9Y6A1 747 aa4.1□□□□□ -1.75
CHD9-215ENST00000565442 CCDC188H7C350 402 aa4.09□□□□□ -1.75
CHD9-215ENST00000565442 PIGNO95427 931 aa4.09□□□□□ -1.75
CHD9-215ENST00000565442 CSN3P07498 182 aa4.09□□□□□ -1.75
CHD9-215ENST00000565442 IGHV4-38-2P0DP08 117 aa4.09□□□□□ -1.75
CHD9-215ENST00000565442 SAGP10523 405 aaPredicted RBP4.09□□□□□ -1.75
CHD9-215ENST00000565442 TCF4P15884 667 aa4.09□□□□□ -1.75
CHD9-215ENST00000565442 CA4P22748 312 aa4.09□□□□□ -1.75
CHD9-215ENST00000565442 CDC25CP30307 473 aa4.09□□□□□ -1.75
CHD9-215ENST00000565442 HOXC8P31273 242 aa4.09□□□□□ -1.75
CHD9-215ENST00000565442 TLX1P31314 330 aaPredicted RBP4.09□□□□□ -1.75
CHD9-215ENST00000565442 LINC01547P58512 204 aaPredicted RBP4.09□□□□□ -1.75
CHD9-215ENST00000565442 RBP5P82980 135 aa4.09□□□□□ -1.75
CHD9-215ENST00000565442 SCARB2Q14108 478 aa4.09□□□□□ -1.75
CHD9-215ENST00000565442 UGT3A2Q3SY77 523 aa4.09□□□□□ -1.75
CHD9-215ENST00000565442 C6orf136Q5SQH8 315 aa4.09□□□□□ -1.75
CHD9-215ENST00000565442 STPG1Q5TH74 334 aa4.09□□□□□ -1.75
CHD9-215ENST00000565442 SLC27A1Q6PCB7 646 aa4.09□□□□□ -1.75
CHD9-215ENST00000565442 C11orf57Q6ZUT1 292 aaPredicted RBP4.09□□□□□ -1.75
CHD9-215ENST00000565442 EID3Q8N140 333 aa4.09□□□□□ -1.75
CHD9-215ENST00000565442 OR8H3Q8N146 312 aa4.09□□□□□ -1.75
CHD9-215ENST00000565442 MAPKAPK5-AS1Q8N8E1 139 aa4.09□□□□□ -1.75
CHD9-215ENST00000565442 LMNTD1Q8N9Z9 388 aa4.09□□□□□ -1.75
CHD9-215ENST00000565442 ZNF383Q8NA42 475 aa4.09□□□□□ -1.75
CHD9-215ENST00000565442 KLHDC9Q8NEP7 349 aa4.09□□□□□ -1.75
CHD9-215ENST00000565442 VANGL1Q8TAA9 524 aaPredicted RBP4.09□□□□□ -1.75
CHD9-215ENST00000565442 LRRC8CQ8TDW0 803 aa4.09□□□□□ -1.75
CHD9-215ENST00000565442 DEPDC1BQ8WUY9 529 aa4.09□□□□□ -1.75
CHD9-215ENST00000565442 INPP4AQ96PE3 977 aaPredicted RBP4.09□□□□□ -1.75
CHD9-215ENST00000565442 NODALQ96S42 347 aa4.09□□□□□ -1.75
CHD9-215ENST00000565442 EGFL8Q99944 293 aa4.09□□□□□ -1.75
CHD9-215ENST00000565442 URM1Q9BTM9 101 aaKnown RBP4.09□□□□□ -1.75
CHD9-215ENST00000565442 THUMPD3Q9BV44 507 aaKnown RBP4.09□□□□□ -1.75
CHD9-215ENST00000565442 GTPBP2Q9BX10 602 aaKnown RBP4.09□□□□□ -1.75
CHD9-215ENST00000565442 SLC2A11Q9BYW1 496 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms