RNA–Protein interactions for RNA: ENST00000565070.5

NSMCE1-208, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-208ENST00000565070 NPAS2Q99743 824 aa12.35□□□□□ -0.43
NSMCE1-208ENST00000565070 NOL11Q9H8H0 719 aaKnown RBP12.35□□□□□ -0.43
NSMCE1-208ENST00000565070 WDR41Q9HAD4 459 aa12.35□□□□□ -0.43
NSMCE1-208ENST00000565070 PFDN4Q9NQP4 134 aa12.35□□□□□ -0.43
NSMCE1-208ENST00000565070 SDR39U1Q9NRG7 319 aaPredicted RBP12.35□□□□□ -0.43
NSMCE1-208ENST00000565070 CCDC167Q9P0B6 97 aa12.35□□□□□ -0.43
NSMCE1-208ENST00000565070 TSR3Q9UJK0 312 aaKnown RBP12.35□□□□□ -0.43
NSMCE1-208ENST00000565070 BTRCQ9Y297 605 aa12.35□□□□□ -0.43
NSMCE1-208ENST00000565070 TIMM22Q9Y584 194 aa12.35□□□□□ -0.43
NSMCE1-208ENST00000565070 ZNF318Q5VUA4 2279 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 FBP2O00757 339 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 INPP4BO15327 924 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 HRO43593 1189 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 VEGFDO43915 354 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 NUAK1O60285 661 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 LILRB5O75023 590 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 FKBP6O75344 327 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 AP2A2O94973 939 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 MATN4O95460 622 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 MSH3P20585 1137 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 HTR1BP28222 390 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 RACK1P63244 317 aaKnown RBP12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 GTF2H3Q13889 308 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 CCNIQ14094 377 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 LRP8Q14114 963 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 GSTA3Q16772 222 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 C18orf21Q32NC0 220 aaPredicted RBP12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 PLK5Q496M5 336 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 LETMD1Q6P1Q0 360 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 GCNT7Q6ZNI0 430 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 SPATA19Q7Z5L4 167 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 ABI3BPQ7Z7G0 1075 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 FUNDC1Q8IVP5 155 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 COX14Q96I36 57 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 MYOCQ99972 504 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 TMEM79Q9BSE2 394 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 APOOQ9BUR5 198 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 CD244Q9BZW8 370 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 TRIM39Q9HCM9 518 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 AASDHPPTQ9NRN7 309 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 SUSD2Q9UGT4 822 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 CNOT6Q9ULM6 557 aaKnown RBP12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 FANCMQ8IYD8 2048 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 SGTAO43765 313 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 OR4F21O95013 312 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 GUCA1CO95843 209 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 OTCP00480 354 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 ENO2P09104 434 aaPredicted RBP12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 HGFP14210 728 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 IDO1P14902 403 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 DHPSP49366 369 aaPredicted RBP12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 THOP1P52888 689 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 PFN3P60673 137 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 AP2B1P63010 937 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 GRIK2Q13002 908 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 CCDC6Q16204 474 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 ZNF423Q2M1K9 1284 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 REP15Q6BDI9 236 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 PAOXQ6QHF9 649 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 HACD2Q6Y1H2 254 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 RGL4Q8IZJ4 473 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 MIER2Q8N344 545 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 DEFB119Q8N690 84 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 MFSD2AQ8NA29 543 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 OR9I1Q8NGQ6 314 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 CCDC124Q96CT7 223 aaKnown RBP12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 ZNF514Q96K75 400 aaPredicted RBP12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 CDRT15Q96T59 188 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 ORAI3Q9BRQ5 295 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 GIMAP2Q9UG22 337 aa12.34□□□□□ -0.43
NSMCE1-208ENST00000565070 POM121BA6NF01 834 aa12.33□□□□□ -0.44
NSMCE1-208ENST00000565070 BBIP1A8MTZ0 92 aa12.33□□□□□ -0.44
NSMCE1-208ENST00000565070 KPNA5O15131 536 aa12.33□□□□□ -0.44
NSMCE1-208ENST00000565070 NRP2O60462 931 aa12.33□□□□□ -0.44
NSMCE1-208ENST00000565070 C8GP07360 202 aa12.33□□□□□ -0.44
NSMCE1-208ENST00000565070 MPC1LP0DKB6 136 aa12.33□□□□□ -0.44
NSMCE1-208ENST00000565070 GNSP15586 552 aa12.33□□□□□ -0.44
NSMCE1-208ENST00000565070 HOXD12P35452 270 aa12.33□□□□□ -0.44
NSMCE1-208ENST00000565070 HSPA7P48741 367 aa12.33□□□□□ -0.44
NSMCE1-208ENST00000565070 CLDN2P57739 230 aa12.33□□□□□ -0.44
NSMCE1-208ENST00000565070 CDKL1Q00532 357 aa12.33□□□□□ -0.44
NSMCE1-208ENST00000565070 TMEM115Q12893 351 aaPredicted RBP12.33□□□□□ -0.44
NSMCE1-208ENST00000565070 TRAF3Q13114 568 aa12.33□□□□□ -0.44
NSMCE1-208ENST00000565070 SIM2Q14190 667 aaPredicted RBP12.33□□□□□ -0.44
NSMCE1-208ENST00000565070 NFATC4Q14934 902 aa12.33□□□□□ -0.44
NSMCE1-208ENST00000565070 TCHHL1Q5QJ38 904 aaPredicted RBP12.33□□□□□ -0.44
NSMCE1-208ENST00000565070 PLEKHS1Q5SXH7 462 aa12.33□□□□□ -0.44
NSMCE1-208ENST00000565070 C8orf82Q6P1X6 216 aaPredicted RBP12.33□□□□□ -0.44
NSMCE1-208ENST00000565070 TTC23LQ6PF05 361 aa12.33□□□□□ -0.44
NSMCE1-208ENST00000565070 RNF165Q6ZSG1 346 aa12.33□□□□□ -0.44
NSMCE1-208ENST00000565070 RABEPKQ7Z6M1 372 aa12.33□□□□□ -0.44
NSMCE1-208ENST00000565070 EFCAB3Q8N7B9 438 aa12.33□□□□□ -0.44
NSMCE1-208ENST00000565070 CDYL2Q8N8U2 506 aa12.33□□□□□ -0.44
NSMCE1-208ENST00000565070 NRG4Q8WWG1 115 aa12.33□□□□□ -0.44
NSMCE1-208ENST00000565070 KLHDC7BQ96G42 594 aa12.33□□□□□ -0.44
NSMCE1-208ENST00000565070 BMFQ96LC9 184 aa12.33□□□□□ -0.44
NSMCE1-208ENST00000565070 CDK15Q96Q40 435 aa12.33□□□□□ -0.44
NSMCE1-208ENST00000565070 LRFN3Q9BTN0 628 aa12.33□□□□□ -0.44
NSMCE1-208ENST00000565070 SLC12A9Q9BXP2 914 aa12.33□□□□□ -0.44
NSMCE1-208ENST00000565070 IRF2BPLQ9H1B7 796 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms