RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 DDHD2O94830 711 aa4.11□□□□□ -1.75
UBR1-205ENST00000564540 PORP16435 677 aaPredicted RBP4.11□□□□□ -1.75
UBR1-205ENST00000564540 ALOX12P18054 663 aa4.11□□□□□ -1.75
UBR1-205ENST00000564540 SAT1P21673 171 aa4.11□□□□□ -1.75
UBR1-205ENST00000564540 JAK1P23458 1154 aa4.11□□□□□ -1.75
UBR1-205ENST00000564540 MNDAP41218 407 aa4.11□□□□□ -1.75
UBR1-205ENST00000564540 HERV-K104P61576 105 aa4.11□□□□□ -1.75
UBR1-205ENST00000564540 GCNT1Q02742 428 aa4.11□□□□□ -1.75
UBR1-205ENST00000564540 LMOD3Q0VAK6 560 aa4.11□□□□□ -1.75
UBR1-205ENST00000564540 EPS8Q12929 822 aa4.11□□□□□ -1.75
UBR1-205ENST00000564540 TAF10Q12962 218 aa4.11□□□□□ -1.75
UBR1-205ENST00000564540 HERC3Q15034 1050 aa4.11□□□□□ -1.75
UBR1-205ENST00000564540 SNAI3Q3KNW1 292 aa4.11□□□□□ -1.75
UBR1-205ENST00000564540 RILPL1Q5EBL4 403 aa4.11□□□□□ -1.75
UBR1-205ENST00000564540 C20orf194Q5TEA3 1177 aa4.11□□□□□ -1.75
UBR1-205ENST00000564540 BSPRYQ5W0U4 402 aa4.11□□□□□ -1.75
UBR1-205ENST00000564540 DOK6Q6PKX4 331 aa4.11□□□□□ -1.75
UBR1-205ENST00000564540 Q6ZRP5 223 aa4.11□□□□□ -1.75
UBR1-205ENST00000564540 BTN2A1Q7KYR7 527 aa4.11□□□□□ -1.75
UBR1-205ENST00000564540 NIPA2Q8N8Q9 360 aa4.11□□□□□ -1.75
UBR1-205ENST00000564540 OR52N5Q8NH56 324 aa4.11□□□□□ -1.75
UBR1-205ENST00000564540 EXD1Q8NHP7 514 aa4.11□□□□□ -1.75
UBR1-205ENST00000564540 FAM222BQ8WU58 562 aa4.11□□□□□ -1.75
UBR1-205ENST00000564540 SSMEM1Q8WWF3 244 aa4.11□□□□□ -1.75
UBR1-205ENST00000564540 ZNRF4Q8WWF5 429 aa4.11□□□□□ -1.75
UBR1-205ENST00000564540 ZNF622Q969S3 477 aaKnown RBP eCLIP4.11□□□□□ -1.751e-8■■□□□ 13.6
UBR1-205ENST00000564540 TEX12Q9BXU0 123 aa4.11□□□□□ -1.75
UBR1-205ENST00000564540 EQTNQ9NQ60 294 aa4.11□□□□□ -1.75
UBR1-205ENST00000564540 PPP2R2CQ9Y2T4 447 aa4.11□□□□□ -1.75
UBR1-205ENST00000564540 NME7Q9Y5B8 376 aa4.11□□□□□ -1.75
UBR1-205ENST00000564540 LOC100509620A0A075B734 347 aa4.1□□□□□ -1.75
UBR1-205ENST00000564540 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.1□□□□□ -1.75
UBR1-205ENST00000564540 ZSCAN5DPP0CG00 497 aa4.1□□□□□ -1.75
UBR1-205ENST00000564540 OPRL1P41146 370 aa4.1□□□□□ -1.75
UBR1-205ENST00000564540 EIF2DP41214 584 aaKnown RBP4.1□□□□□ -1.75
UBR1-205ENST00000564540 MATR3P43243 847 aaKnown RBP eCLIP4.1□□□□□ -1.75
UBR1-205ENST00000564540 RPL21P46778 160 aaKnown RBP4.1□□□□□ -1.75
UBR1-205ENST00000564540 LEPRP48357 1165 aaKnown RBP4.1□□□□□ -1.75
UBR1-205ENST00000564540 MAZP56270 477 aaKnown RBP4.1□□□□□ -1.75
UBR1-205ENST00000564540 GSDMDP57764 484 aa4.1□□□□□ -1.75
UBR1-205ENST00000564540 KRTAP10-3P60369 221 aa4.1□□□□□ -1.75
UBR1-205ENST00000564540 IRX6P78412 446 aaPredicted RBP4.1□□□□□ -1.75
UBR1-205ENST00000564540 CUL4AQ13619 759 aa4.1□□□□□ -1.75
UBR1-205ENST00000564540 NTRK2Q16620 822 aa4.1□□□□□ -1.75
UBR1-205ENST00000564540 C15orf59Q2T9L4 293 aaPredicted RBP4.1□□□□□ -1.75
UBR1-205ENST00000564540 FASTKD1Q53R41 847 aaKnown RBP4.1□□□□□ -1.75
UBR1-205ENST00000564540 TRIM65Q6PJ69 517 aa4.1□□□□□ -1.75
UBR1-205ENST00000564540 TMEM207Q6UWW9 146 aa4.1□□□□□ -1.75
UBR1-205ENST00000564540 SPEM1Q8N4L4 309 aa4.1□□□□□ -1.75
UBR1-205ENST00000564540 APPL2Q8NEU8 664 aa4.1□□□□□ -1.75
UBR1-205ENST00000564540 VANGL1Q8TAA9 524 aaPredicted RBP4.1□□□□□ -1.75
UBR1-205ENST00000564540 SMAP2Q8WU79 429 aaPredicted RBP4.1□□□□□ -1.75
UBR1-205ENST00000564540 ARHGAP45Q92619 1136 aa4.1□□□□□ -1.75
UBR1-205ENST00000564540 CENPTQ96BT3 561 aa4.1□□□□□ -1.75
UBR1-205ENST00000564540 DHX58Q96C10 678 aa4.1□□□□□ -1.75
UBR1-205ENST00000564540 SPDL1Q96EA4 605 aa4.1□□□□□ -1.75
UBR1-205ENST00000564540 DCTN5Q9BTE1 182 aa4.1□□□□□ -1.75
UBR1-205ENST00000564540 CPVLQ9H3G5 476 aa4.1□□□□□ -1.75
UBR1-205ENST00000564540 OPA3Q9H6K4 179 aa4.1□□□□□ -1.75
UBR1-205ENST00000564540 PDE7BQ9NP56 450 aa4.1□□□□□ -1.75
UBR1-205ENST00000564540 GKN1Q9NS71 199 aa4.1□□□□□ -1.75
UBR1-205ENST00000564540 GIMAP4Q9NUV9 329 aa4.1□□□□□ -1.75
UBR1-205ENST00000564540 SPHK1Q9NYA1 384 aa4.1□□□□□ -1.75
UBR1-205ENST00000564540 GRID1Q9ULK0 1009 aa4.1□□□□□ -1.75
UBR1-205ENST00000564540 GPR34Q9UPC5 381 aa4.1□□□□□ -1.75
UBR1-205ENST00000564540 PPP1R3CQ9UQK1 317 aa4.1□□□□□ -1.75
UBR1-205ENST00000564540 TNNQ9UQP3 1299 aa4.1□□□□□ -1.75
UBR1-205ENST00000564540 MEX3AA1L020 520 aaKnown RBP4.09□□□□□ -1.75
UBR1-205ENST00000564540 ANKRD18BA2A2Z9 1011 aa4.09□□□□□ -1.75
UBR1-205ENST00000564540 ENO4A6NNW6 628 aa4.09□□□□□ -1.75
UBR1-205ENST00000564540 MAGEC1O60732 1142 aa4.09□□□□□ -1.75
UBR1-205ENST00000564540 NXPH2O95156 264 aa4.09□□□□□ -1.75
UBR1-205ENST00000564540 CDH3P22223 829 aa4.09□□□□□ -1.75
UBR1-205ENST00000564540 PAX9P55771 341 aa4.09□□□□□ -1.75
UBR1-205ENST00000564540 HNRNPKP61978 463 aaKnown RBP eCLIP4.09□□□□□ -1.75
UBR1-205ENST00000564540 NECTIN1Q15223 517 aa4.09□□□□□ -1.75
UBR1-205ENST00000564540 CA9Q16790 459 aa4.09□□□□□ -1.75
UBR1-205ENST00000564540 ODF4Q2M2E3 257 aa4.09□□□□□ -1.75
UBR1-205ENST00000564540 HLA-BQ31612 363 aa4.09□□□□□ -1.75
UBR1-205ENST00000564540 SYT14P1Q58G82 188 aa4.09□□□□□ -1.75
UBR1-205ENST00000564540 FIP1L1Q6UN15 594 aaKnown RBP4.09□□□□□ -1.75
UBR1-205ENST00000564540 ARHGAP22Q7Z5H3 698 aa4.09□□□□□ -1.75
UBR1-205ENST00000564540 MINDY1Q8N5J2 469 aa4.09□□□□□ -1.75
UBR1-205ENST00000564540 SPACA9Q96E40 222 aaPredicted RBP4.09□□□□□ -1.75
UBR1-205ENST00000564540 RSRC1Q96IZ7 334 aaKnown RBP4.09□□□□□ -1.75
UBR1-205ENST00000564540 PIGQQ9BRB3 760 aa4.09□□□□□ -1.75
UBR1-205ENST00000564540 DGCR6LQ9BY27 220 aa4.09□□□□□ -1.75
UBR1-205ENST00000564540 PITPNM3Q9BZ71 974 aa4.09□□□□□ -1.75
UBR1-205ENST00000564540 GOLPH3LQ9H4A5 285 aa4.09□□□□□ -1.75
UBR1-205ENST00000564540 DPP3Q9NY33 737 aa4.09□□□□□ -1.75
UBR1-205ENST00000564540 CRNNQ9UBG3 495 aaPredicted RBP4.09□□□□□ -1.75
UBR1-205ENST00000564540 PADI2Q9Y2J8 665 aa4.09□□□□□ -1.75
UBR1-205ENST00000564540 DANCRP0C864 163 aa4.08□□□□□ -1.76
UBR1-205ENST00000564540 DARSP14868 501 aaKnown RBP4.08□□□□□ -1.76
UBR1-205ENST00000564540 MPZP25189 248 aa4.08□□□□□ -1.76
UBR1-205ENST00000564540 MMP12P39900 470 aa4.08□□□□□ -1.76
UBR1-205ENST00000564540 MAT1AQ00266 395 aaKnown RBP4.08□□□□□ -1.76
UBR1-205ENST00000564540 TCTE1Q5JU00 501 aa4.08□□□□□ -1.76
UBR1-205ENST00000564540 LYG1Q8N1E2 194 aa4.08□□□□□ -1.76
UBR1-205ENST00000564540 OR10G8Q8NGN5 311 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms