RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 C16orf45Q96MC5 204 aaPredicted RBP27.31■■□□□ 1.96
NME3-203ENST00000563367 GPR21Q99679 349 aa27.31■■□□□ 1.96
NME3-203ENST00000563367 ERP44Q9BS26 406 aa27.31■■□□□ 1.96
NME3-203ENST00000563367 DPH5Q9H2P9 285 aa27.31■■□□□ 1.96
NME3-203ENST00000563367 SLC39A10Q9ULF5 831 aa27.31■■□□□ 1.96
NME3-203ENST00000563367 COMMD10Q9Y6G5 202 aa27.31■■□□□ 1.96
NME3-203ENST00000563367 TMEM150CB9EJG8 249 aa27.3■■□□□ 1.96
NME3-203ENST00000563367 ERVH48-1M5A8F1 160 aa27.3■■□□□ 1.96
NME3-203ENST00000563367 HCRTR1O43613 425 aa27.3■■□□□ 1.96
NME3-203ENST00000563367 MSL3P1P0C860 447 aa27.3■■□□□ 1.96
NME3-203ENST00000563367 CCNFP41002 786 aa27.3■■□□□ 1.96
NME3-203ENST00000563367 TIAL1Q01085 375 aaKnown RBP eCLIP27.3■■□□□ 1.96
NME3-203ENST00000563367 PDIA2Q13087 525 aaKnown RBP27.3■■□□□ 1.96
NME3-203ENST00000563367 FASTKD3Q14CZ7 662 aaKnown RBP27.3■■□□□ 1.96
NME3-203ENST00000563367 MAATS1Q7Z4T9 603 aa27.3■■□□□ 1.96
NME3-203ENST00000563367 TMEM126BQ8IUX1 230 aa27.3■■□□□ 1.96
NME3-203ENST00000563367 CD200R1Q8TD46 325 aa27.3■■□□□ 1.96
NME3-203ENST00000563367 DENND1AQ8TEH3 1009 aa27.3■■□□□ 1.96
NME3-203ENST00000563367 NDNQ99608 321 aa27.3■■□□□ 1.96
NME3-203ENST00000563367 AKIRIN1Q9H9L7 192 aaPredicted RBP27.3■■□□□ 1.96
NME3-203ENST00000563367 KLHL42Q9P2K6 505 aa27.3■■□□□ 1.96
NME3-203ENST00000563367 DHRS7Q9Y394 339 aa27.3■■□□□ 1.96
NME3-203ENST00000563367 ARHGEF33A8MVX0 844 aa27.29■■□□□ 1.96
NME3-203ENST00000563367 E7ESA3 106 aa27.29■■□□□ 1.96
NME3-203ENST00000563367 TERTO14746 1132 aaKnown RBP27.29■■□□□ 1.96
NME3-203ENST00000563367 MAP3K7O43318 606 aa27.29■■□□□ 1.96
NME3-203ENST00000563367 SCRG1O75711 98 aa27.29■■□□□ 1.96
NME3-203ENST00000563367 AHSGP02765 367 aa27.29■■□□□ 1.96
NME3-203ENST00000563367 EEF1AKMT2Q5JPI9 291 aaKnown RBP27.29■■□□□ 1.96
NME3-203ENST00000563367 TEDDM1Q5T9Z0 273 aa27.29■■□□□ 1.96
NME3-203ENST00000563367 SLC38A9Q8NBW4 561 aa27.29■■□□□ 1.96
NME3-203ENST00000563367 INPP5DQ92835 1189 aa27.29■■□□□ 1.96
NME3-203ENST00000563367 TCTN2Q96GX1 697 aa27.29■■□□□ 1.96
NME3-203ENST00000563367 SLC45A3Q96JT2 553 aa27.29■■□□□ 1.96
NME3-203ENST00000563367 FANCEQ9HB96 536 aa27.29■■□□□ 1.96
NME3-203ENST00000563367 SYTL2Q9HCH5 934 aa27.29■■□□□ 1.96
NME3-203ENST00000563367 CROTQ9UKG9 612 aa27.29■■□□□ 1.96
NME3-203ENST00000563367 PADI1Q9ULC6 663 aa27.29■■□□□ 1.96
NME3-203ENST00000563367 KLHL20Q9Y2M5 609 aa27.29■■□□□ 1.96
NME3-203ENST00000563367 MRFAP1Q9Y605 127 aa27.29■■□□□ 1.96
NME3-203ENST00000563367 FER1L5A0AVI2 2057 aa27.28■■□□□ 1.96
NME3-203ENST00000563367 PRICKLE3O43900 615 aaPredicted RBP27.28■■□□□ 1.96
NME3-203ENST00000563367 PSIP1O75475 530 aaKnown RBP27.28■■□□□ 1.96
NME3-203ENST00000563367 DLSTP36957 453 aa27.28■■□□□ 1.96
NME3-203ENST00000563367 GABRA4P48169 554 aa27.28■■□□□ 1.96
NME3-203ENST00000563367 TTLL9Q3SXZ7 439 aa27.28■■□□□ 1.96
NME3-203ENST00000563367 DUPD1Q68J44 220 aa27.28■■□□□ 1.96
NME3-203ENST00000563367 NEK10Q6ZWH5 1172 aa27.28■■□□□ 1.96
NME3-203ENST00000563367 ZNF572Q7Z3I7 529 aaPredicted RBP27.28■■□□□ 1.96
NME3-203ENST00000563367 BBOF1Q8ND07 529 aa27.28■■□□□ 1.96
NME3-203ENST00000563367 RAB11FIP5Q9BXF6 653 aa27.28■■□□□ 1.96
NME3-203ENST00000563367 PPANQ9NQ55 473 aaKnown RBP27.28■■□□□ 1.96
NME3-203ENST00000563367 LHX9Q9NQ69 397 aa27.28■■□□□ 1.96
NME3-203ENST00000563367 WHRNQ9P202 907 aa27.28■■□□□ 1.96
NME3-203ENST00000563367 MRPS18BQ9Y676 258 aaKnown RBP27.28■■□□□ 1.96
NME3-203ENST00000563367 SMG1Q96Q15 3661 aaKnown RBP27.28■■□□□ 1.96
NME3-203ENST00000563367 ATRXP46100 2492 aa27.28■■□□□ 1.96
NME3-203ENST00000563367 NKX2-8O15522 239 aa27.27■■□□□ 1.96
NME3-203ENST00000563367 MT-ND3P03897 115 aa27.27■■□□□ 1.96
NME3-203ENST00000563367 CCNYL3P0C7X3 344 aa27.27■■□□□ 1.96
NME3-203ENST00000563367 CBLBQ13191 982 aa27.27■■□□□ 1.96
NME3-203ENST00000563367 DEFB110Q30KQ9 67 aa27.27■■□□□ 1.96
NME3-203ENST00000563367 RBM20Q5T481 1227 aaKnown RBP27.27■■□□□ 1.96
NME3-203ENST00000563367 CYHR1Q6ZMK1 362 aa27.27■■□□□ 1.96
NME3-203ENST00000563367 KIAA0408Q6ZU52 694 aa27.27■■□□□ 1.96
NME3-203ENST00000563367 CPNE9Q8IYJ1 553 aa27.27■■□□□ 1.96
NME3-203ENST00000563367 FBXO36Q8NEA4 188 aa27.27■■□□□ 1.96
NME3-203ENST00000563367 GABPB2Q8TAK5 448 aaPredicted RBP27.27■■□□□ 1.96
NME3-203ENST00000563367 MAGEC3Q8TD91 643 aa27.27■■□□□ 1.96
NME3-203ENST00000563367 CHRNA10Q9GZZ6 450 aa27.27■■□□□ 1.96
NME3-203ENST00000563367 GRHL1Q9NZI5 618 aa27.27■■□□□ 1.96
NME3-203ENST00000563367 CPNE3O75131 537 aaKnown RBP27.26■■□□□ 1.95
NME3-203ENST00000563367 VPS26AO75436 327 aa27.26■■□□□ 1.95
NME3-203ENST00000563367 GPS2Q13227 327 aa27.26■■□□□ 1.95
NME3-203ENST00000563367 FASTKQ14296 549 aaKnown RBP27.26■■□□□ 1.95
NME3-203ENST00000563367 TAF1BQ53T94 588 aaPredicted RBP27.26■■□□□ 1.95
NME3-203ENST00000563367 OR9A1PQ8NGU1 263 aa27.26■■□□□ 1.95
NME3-203ENST00000563367 HMGCLL1Q8TB92 370 aa27.26■■□□□ 1.95
NME3-203ENST00000563367 CT55Q8WUE5 264 aa27.26■■□□□ 1.95
NME3-203ENST00000563367 SLC39A7Q92504 469 aa27.26■■□□□ 1.95
NME3-203ENST00000563367 SLC22A18Q96BI1 424 aa27.26■■□□□ 1.95
NME3-203ENST00000563367 EFHD1Q9BUP0 239 aa27.26■■□□□ 1.95
NME3-203ENST00000563367 SERTAD3Q9UJW9 196 aa27.26■■□□□ 1.95
NME3-203ENST00000563367 CDC23Q9UJX2 597 aa27.26■■□□□ 1.95
NME3-203ENST00000563367 PCDHB3Q9Y5E6 796 aa27.26■■□□□ 1.95
NME3-203ENST00000563367 HEATR5BQ9P2D3 2071 aa27.26■■□□□ 1.95
NME3-203ENST00000563367 ZNF891A8MT65 544 aaPredicted RBP27.25■■□□□ 1.95
NME3-203ENST00000563367 NDC80O14777 642 aa27.25■■□□□ 1.95
NME3-203ENST00000563367 CTSBP07858 339 aa27.25■■□□□ 1.95
NME3-203ENST00000563367 MPC1LP0DKB6 136 aa27.25■■□□□ 1.95
NME3-203ENST00000563367 MAGP20916 626 aa27.25■■□□□ 1.95
NME3-203ENST00000563367 MCM3P25205 808 aa27.25■■□□□ 1.95
NME3-203ENST00000563367 PSMB5P28074 263 aa27.25■■□□□ 1.95
NME3-203ENST00000563367 CDKN2DP55273 166 aa27.25■■□□□ 1.95
NME3-203ENST00000563367 ITGA1P56199 1179 aa27.25■■□□□ 1.95
NME3-203ENST00000563367 FRG1Q14331 258 aaKnown RBP27.25■■□□□ 1.95
NME3-203ENST00000563367 SF1Q15637 639 aaKnown RBP27.25■■□□□ 1.95
NME3-203ENST00000563367 CYP2A13Q16696 494 aa27.25■■□□□ 1.95
NME3-203ENST00000563367 LINC00303Q3SY05 128 aa27.25■■□□□ 1.95
NME3-203ENST00000563367 FAM199XQ6PEV8 388 aaPredicted RBP27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms