RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	FANCE	Q9HB96	536 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	RAVER2	Q9HCJ3	691 aa	Known RBP	4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	ANO10	Q9NW15	660 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	DONSON	Q9NYP3	566 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	NINJ2	Q9NZG7	142 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	NCKIPSD	Q9NZQ3	722 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	DNAJB9	Q9UBS3	223 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	FETUB	Q9UGM5	382 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	PCDHA12	Q9UN75	941 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	STX8	Q9UNK0	236 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	LIPT1	Q9Y234	373 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	BTBD3	Q9Y2F9	522 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	KLHL20	Q9Y2M5	609 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	LYVE1	Q9Y5Y7	322 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	PIAS3	Q9Y6X2	628 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	PLXNA1	Q9UIW2	1896 aa		4.05	□□□□□ -1.76
LRRC28-222	ENST00000561431	DOCK3	Q8IZD9	2030 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	IGLV5-39	A0A0G2JS06	123 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	CTAGE15	A4D2H0	777 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	GAGE12J	A6NER3	117 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	NPIPB15	A6NHN6	443 aa	Predicted RBP	4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	KDM4E	B2RXH2	506 aa	Predicted RBP	4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431		H3BNX3	289 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	MDM4	O15151	490 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	BCAT2	O15382	392 aa	Predicted RBP	4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	POLR2D	O15514	142 aa	Known RBP	4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	CNOT3	O75175	753 aa	Known RBP	4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	TPM1	P09493	284 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	POLR2M	P0CAP2	368 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	CTAGE8	P0CG41	777 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	CAPN2	P17655	700 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	CHRNB2	P17787	502 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	TYMP	P19971	482 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	EDN2	P20800	178 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	HOXC8	P31273	242 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	S100A5	P33763	92 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	BSG	P35613	385 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	EIF2D	P41214	584 aa	Known RBP	4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	SLC1A4	P43007	532 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	GABRB2	P47870	512 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	PPP3CC	P48454	512 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	NT5C2	P49902	561 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	SNAP25	P60880	206 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	OLR1	P78380	273 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	ARF5	P84085	180 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	ACY1	Q03154	408 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	TMEM115	Q12893	351 aa	Predicted RBP	4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	RIPK1	Q13546	671 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	SNX1	Q13596	522 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	KLF9	Q13886	244 aa	Predicted RBP	4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	GPR18	Q14330	331 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	MED22	Q15528	200 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	TYSND1	Q2T9J0	566 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	DPCR1	Q3MIW9	517 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	BMP2KL	Q5H9B9	411 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	TCTE1	Q5JU00	501 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431		Q5PR19	223 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	PRAMEF19	Q5SWL8	479 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	MFSD14C	Q5VZR4	134 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	LRRC8E	Q6NSJ5	796 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	TMEM71	Q6P5X7	295 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	TSSK4	Q6SA08	328 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	PARM1	Q6UWI2	310 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	PET117	Q6UWS5	81 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431		Q6ZTK2	550 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	PXK	Q7Z7A4	578 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	CTAGE6	Q86UF2	777 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	CTAGE4	Q8IX94	777 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	PEX5L	Q8IYB4	626 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	SCML4	Q8N228	414 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	PDCL2	Q8N4E4	241 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	ARL14	Q8N4G2	192 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	FRMD1	Q8N878	549 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	ZNF548	Q8NEK5	533 aa	Predicted RBP	4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	OR8K3	Q8NH51	312 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	FIBIN	Q8TAL6	211 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	ESR2	Q92731	530 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	GTF3C6	Q969F1	213 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	TMEM18	Q96B42	140 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	LRRC45	Q96CN5	670 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	SGF29	Q96ES7	293 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	PGAP3	Q96FM1	320 aa	Predicted RBP	4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	ZNF570	Q96NI8	536 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	GBP5	Q96PP8	586 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	LSG1	Q9H089	658 aa	Known RBP	4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	RNF41	Q9H4P4	317 aa	Predicted RBP	4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	OPA3	Q9H6K4	179 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	MVB12B	Q9H7P6	319 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	MAP6D1	Q9H9H5	199 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	PARVG	Q9HBI0	331 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	SLC35C2	Q9NQQ7	365 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	GDAP2	Q9NXN4	497 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	ELOVL5	Q9NYP7	299 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	EHD2	Q9NZN4	543 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	SELENON	Q9NZV5	590 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	HAO1	Q9UJM8	370 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	RCOR1	Q9UKL0	485 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	MKLN1	Q9UL63	735 aa		4.04	□□□□□ -1.76
LRRC28-222	ENST00000561431	AURKC	Q9UQB9	309 aa		4.04	□□□□□ -1.76

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