RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 MAGEB3O15480 346 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 KLHL41O60662 606 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 CYTIPO60759 359 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 SPAG6O75602 509 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 RHOBTB1O94844 696 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 OR6A2O95222 327 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 MMP10P09238 476 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 CHRNB2P17787 502 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 CCNCP24863 283 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 CORO1AP31146 461 aaKnown RBP3.63□□□□□ -1.83
TDP1-217ENST00000557782 STX2P32856 288 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 HSPA1LP34931 641 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 FMO5P49326 533 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 CNN1P51911 297 aaKnown RBP3.63□□□□□ -1.83
TDP1-217ENST00000557782 HNRNPH2P55795 449 aaKnown RBP3.63□□□□□ -1.83
TDP1-217ENST00000557782 HUNKP57058 714 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 GSDMDP57764 484 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 SIM1P81133 766 aaPredicted RBP3.63□□□□□ -1.83
TDP1-217ENST00000557782 TROAPQ12815 778 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 ILF2Q12905 390 aaKnown RBP3.63□□□□□ -1.83
TDP1-217ENST00000557782 ABRQ12979 859 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 SNX1Q13596 522 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 ZNF268Q14587 947 aaPredicted RBP3.63□□□□□ -1.83
TDP1-217ENST00000557782 ZNF169Q14929 603 aaPredicted RBP3.63□□□□□ -1.83
TDP1-217ENST00000557782 CTF1Q16619 201 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 TPD52L1Q16890 204 aaPredicted RBP3.63□□□□□ -1.83
TDP1-217ENST00000557782 KIF19Q2TAC6 998 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 FILIP1LQ4L180 1135 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 CFAP157Q5JU67 520 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 SUMO4Q6EEV6 95 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 C11orf63Q6NUN7 778 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 BTNL8Q6UX41 500 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 DLK2Q6UY11 383 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 ZNF517Q6ZMY9 492 aaPredicted RBP3.63□□□□□ -1.83
TDP1-217ENST00000557782 ARHGAP22Q7Z5H3 698 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 TMPRSS11BQ86T26 416 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 ASPGQ86U10 573 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 VASH2Q86V25 355 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 OTUD6BQ8N6M0 293 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 OR52M1Q8NGK5 317 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 THAP6Q8TBB0 222 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 BRSK1Q8TDC3 778 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 SMPDL3BQ92485 455 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 P2RX5Q93086 422 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 FAM46BQ96A09 425 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 RHBDF1Q96CC6 855 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 CCDC51Q96ER9 411 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 NECTIN4Q96NY8 510 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 PLEKHG4BQ96PX9 1271 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 RASL10BQ96S79 203 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 RAD9AQ99638 391 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 BTBD10Q9BSF8 475 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 MLST8Q9BVC4 326 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 CDK19Q9BWU1 502 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 PUS3Q9BZE2 481 aaKnown RBP3.63□□□□□ -1.83
TDP1-217ENST00000557782 POLR1EQ9GZS1 481 aaKnown RBP3.63□□□□□ -1.83
TDP1-217ENST00000557782 SEMA6AQ9H2E6 1030 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 UBQLN3Q9H347 655 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 TM9SF3Q9HD45 589 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 PALMDQ9NP74 551 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 THSD1Q9NS62 852 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 GPR173Q9NS66 373 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 PIGVQ9NUD9 493 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 NPAP1Q9NZP6 1156 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 RAI14Q9P0K7 980 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 FOXJ2Q9P0K8 574 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 ZNF510Q9Y2H8 683 aa3.63□□□□□ -1.83
TDP1-217ENST00000557782 MRPS7Q9Y2R9 242 aaKnown RBP3.63□□□□□ -1.83
TDP1-217ENST00000557782 NCAPD2Q15021 1401 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 A0A087X0K7 114 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 A0A0B4J203 849 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 TRAV24A0A0B4J272 114 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 HYKKA2RU49 373 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 OR2M5A3KFT3 312 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 TRIM49BA6NDI0 452 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 GOLGA6L9A6NEM1 432 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 GAGE12JA6NER3 117 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 TMEM150CB9EJG8 249 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 SLC28A1O00337 649 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 NUDT21O43809 227 aaKnown RBP3.62□□□□□ -1.83
TDP1-217ENST00000557782 ZIC3O60481 467 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 MTX2O75431 263 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 LDLRP01130 860 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 STAG3L1P0CL83 205 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 CALCBP10092 127 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 IRF2P14316 349 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 TAL1P17542 331 aaPredicted RBP3.62□□□□□ -1.83
TDP1-217ENST00000557782 CYP2F1P24903 491 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 ELAVL4P26378 380 aaKnown RBP3.62□□□□□ -1.83
TDP1-217ENST00000557782 GDI1P31150 447 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 AKT2P31751 481 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 PTGER4P35408 488 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 CDKN1AP38936 164 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 TNNT2P45379 298 aaPredicted RBP3.62□□□□□ -1.83
TDP1-217ENST00000557782 NSFP46459 744 aaKnown RBP3.62□□□□□ -1.83
TDP1-217ENST00000557782 RPL21P46778 160 aaKnown RBP3.62□□□□□ -1.83
TDP1-217ENST00000557782 PLCD1P51178 756 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 CLDN20P56880 219 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 C21orf58P58505 322 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 SSTP61278 116 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms