RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 KIF26BQ2KJY2 2108 aa7.09□□□□□ -1.27
SCFD1-222ENST00000556768 FLNBO75369 2602 aaKnown RBP7.09□□□□□ -1.27
SCFD1-222ENST00000556768 TMEM238LA0A1B0GVL6 79 aa7.09□□□□□ -1.27
SCFD1-222ENST00000556768 ISM1B1AKI9 464 aa7.09□□□□□ -1.27
SCFD1-222ENST00000556768 TMEM150CB9EJG8 249 aa7.09□□□□□ -1.27
SCFD1-222ENST00000556768 E7EQ34 232 aa7.09□□□□□ -1.27
SCFD1-222ENST00000556768 H3BMM5 538 aa7.09□□□□□ -1.27
SCFD1-222ENST00000556768 MKRN2OSH3BPM6 223 aa7.09□□□□□ -1.27
SCFD1-222ENST00000556768 BTN3A1O00481 513 aa7.09□□□□□ -1.27
SCFD1-222ENST00000556768 FBXO24O75426 580 aa7.09□□□□□ -1.27
SCFD1-222ENST00000556768 VAPBO95292 243 aa7.09□□□□□ -1.27
SCFD1-222ENST00000556768 CD63P08962 238 aa7.09□□□□□ -1.27
SCFD1-222ENST00000556768 PLA2G2AP14555 144 aa7.09□□□□□ -1.27
SCFD1-222ENST00000556768 ITGB6P18564 788 aa7.09□□□□□ -1.27
SCFD1-222ENST00000556768 AGXTP21549 392 aa7.09□□□□□ -1.27
SCFD1-222ENST00000556768 CSE1LP55060 971 aaKnown RBP7.09□□□□□ -1.27
SCFD1-222ENST00000556768 POU4F2Q12837 409 aa7.09□□□□□ -1.27
SCFD1-222ENST00000556768 GPS1Q13098 491 aa7.09□□□□□ -1.27
SCFD1-222ENST00000556768 DNASE1L3Q13609 305 aa7.09□□□□□ -1.27
SCFD1-222ENST00000556768 GPR19Q15760 415 aa7.09□□□□□ -1.27
SCFD1-222ENST00000556768 SPESP1Q6UW49 350 aa7.09□□□□□ -1.27
SCFD1-222ENST00000556768 UNC5AQ6ZN44 842 aa7.09□□□□□ -1.27
SCFD1-222ENST00000556768 PRUNE1Q86TP1 453 aa7.09□□□□□ -1.27
SCFD1-222ENST00000556768 OR5AR1Q8NGP9 310 aa7.09□□□□□ -1.27
SCFD1-222ENST00000556768 CFAP61Q8NHU2 1237 aa7.09□□□□□ -1.27
SCFD1-222ENST00000556768 GABPB2Q8TAK5 448 aaPredicted RBP7.09□□□□□ -1.27
SCFD1-222ENST00000556768 DENND1AQ8TEH3 1009 aa7.09□□□□□ -1.27
SCFD1-222ENST00000556768 GRK7Q8WTQ7 553 aa7.09□□□□□ -1.27
SCFD1-222ENST00000556768 THAP4Q8WY91 577 aa7.09□□□□□ -1.27
SCFD1-222ENST00000556768 ZNF501Q96CX3 271 aaPredicted RBP7.09□□□□□ -1.27
SCFD1-222ENST00000556768 DPH2Q9BQC3 489 aaPredicted RBP7.09□□□□□ -1.27
SCFD1-222ENST00000556768 XKR8Q9H6D3 395 aa7.09□□□□□ -1.27
SCFD1-222ENST00000556768 ACTR5Q9H9F9 607 aaPredicted RBP7.09□□□□□ -1.27
SCFD1-222ENST00000556768 STARD5Q9NSY2 213 aa7.09□□□□□ -1.27
SCFD1-222ENST00000556768 INTS7Q9NVH2 962 aaKnown RBP7.09□□□□□ -1.27
SCFD1-222ENST00000556768 ACTR10Q9NZ32 417 aa7.09□□□□□ -1.27
SCFD1-222ENST00000556768 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.09□□□□□ -1.27
SCFD1-222ENST00000556768 FARSAQ9Y285 508 aaKnown RBP7.09□□□□□ -1.27
SCFD1-222ENST00000556768 PCDHGA6Q9Y5G7 932 aa7.09□□□□□ -1.27
SCFD1-222ENST00000556768 PRSS21Q9Y6M0 314 aa7.09□□□□□ -1.27
SCFD1-222ENST00000556768 AP1M2Q9Y6Q5 423 aa7.09□□□□□ -1.27
SCFD1-222ENST00000556768 SLC5A10A0PJK1 596 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 SDR42E2A6NKP2 422 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 C9J4A7 227 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 E5RI56 91 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 PGRMC1O00264 195 aaKnown RBP7.08□□□□□ -1.28
SCFD1-222ENST00000556768 BTN3A3O00478 584 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 KRT14P02533 472 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 TPSB2P20231 275 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 CHRM3P20309 590 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 ACADLP28330 430 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 PTPN4P29074 926 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 CCR7P32248 378 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 VPS41P49754 854 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 RAB28P51157 221 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 TERF1P54274 439 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 ITGA1P56199 1179 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 CRADDP78560 199 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 CCZ1BP86790 482 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 CCZ1P86791 482 aaPredicted RBP7.08□□□□□ -1.28
SCFD1-222ENST00000556768 ABRQ12979 859 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 THOC5Q13769 683 aaKnown RBP7.08□□□□□ -1.28
SCFD1-222ENST00000556768 KIR2DS3Q14952 304 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 SIX1Q15475 284 aaPredicted RBP7.08□□□□□ -1.28
SCFD1-222ENST00000556768 TRIP13Q15645 432 aaPredicted RBP7.08□□□□□ -1.28
SCFD1-222ENST00000556768 TPSAB1Q15661 275 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 CCDC137Q6PK04 289 aaKnown RBP7.08□□□□□ -1.28
SCFD1-222ENST00000556768 NAPRTQ6XQN6 538 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 ZNF534Q76KX8 674 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 SYVN1Q86TM6 617 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 SLC22A15Q8IZD6 547 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 ADGRF3Q8IZF5 1079 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 GLIS1Q8NBF1 620 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 C9orf43Q8TAL5 461 aaPredicted RBP7.08□□□□□ -1.28
SCFD1-222ENST00000556768 ANAPC16Q96DE5 110 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 LRFN5Q96NI6 719 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 KIFC1Q9BW19 673 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 RAB11FIP5Q9BXF6 653 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 PITPNM3Q9BZ71 974 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 CCDC68Q9H2F9 335 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 ACTL8Q9H568 366 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 GRPEL1Q9HAV7 217 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 MRM3Q9HC36 420 aaKnown RBP7.08□□□□□ -1.28
SCFD1-222ENST00000556768 XAB2Q9HCS7 855 aaKnown RBP7.08□□□□□ -1.28
SCFD1-222ENST00000556768 KLHL42Q9P2K6 505 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 TTC7AQ9ULT0 858 aaPredicted RBP7.08□□□□□ -1.28
SCFD1-222ENST00000556768 MAN2B2Q9Y2E5 1009 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 PADI2Q9Y2J8 665 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 TLN1Q9Y490 2541 aaKnown RBP7.08□□□□□ -1.28
SCFD1-222ENST00000556768 COL12A1Q99715 3063 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 A0A1W2PNR3 127 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 CDC14CA4D256 554 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 J3QL48 77 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 OR2B3O76000 313 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 SLCO2B1O94956 709 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 TIAF1O95411 115 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 PF4P02776 101 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 ESR1P03372 595 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 CHRM5P08912 532 aaPredicted RBP7.08□□□□□ -1.28
SCFD1-222ENST00000556768 MLNP12872 115 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms