RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 MAGEA6P43360 314 aa23.56■■□□□ 1.36
PRKCH-216ENST00000555542 BDKRB1P46663 353 aa23.56■■□□□ 1.36
PRKCH-216ENST00000555542 CSRP3P50461 194 aa23.56■■□□□ 1.36
PRKCH-216ENST00000555542 CHAF1BQ13112 559 aa23.56■■□□□ 1.36
PRKCH-216ENST00000555542 DHX34Q14147 1143 aaKnown RBP23.56■■□□□ 1.36
PRKCH-216ENST00000555542 NCF4Q15080 339 aa23.56■■□□□ 1.36
PRKCH-216ENST00000555542 SF1Q15637 639 aaKnown RBP23.56■■□□□ 1.36
PRKCH-216ENST00000555542 TYSND1Q2T9J0 566 aa23.56■■□□□ 1.36
PRKCH-216ENST00000555542 C1orf189Q5VU69 101 aa23.56■■□□□ 1.36
PRKCH-216ENST00000555542 FAM198BQ6UWH4 519 aa23.56■■□□□ 1.36
PRKCH-216ENST00000555542 APLFQ8IW19 511 aaPredicted RBP23.56■■□□□ 1.36
PRKCH-216ENST00000555542 ZNF655Q8N720 491 aaPredicted RBP23.56■■□□□ 1.36
PRKCH-216ENST00000555542 LINC01555Q8NAE3 123 aa23.56■■□□□ 1.36
PRKCH-216ENST00000555542 LPGAT1Q92604 370 aa23.56■■□□□ 1.36
PRKCH-216ENST00000555542 TCF12Q99081 682 aa23.56■■□□□ 1.36
PRKCH-216ENST00000555542 CHRNA10Q9GZZ6 450 aa23.56■■□□□ 1.36
PRKCH-216ENST00000555542 XAB2Q9HCS7 855 aaKnown RBP23.56■■□□□ 1.36
PRKCH-216ENST00000555542 PLCL2Q9UPR0 1127 aa23.56■■□□□ 1.36
PRKCH-216ENST00000555542 RUVBL2Q9Y230 463 aaKnown RBP23.56■■□□□ 1.36
PRKCH-216ENST00000555542 KLHL20Q9Y2M5 609 aa23.56■■□□□ 1.36
PRKCH-216ENST00000555542 SDR42E2A6NKP2 422 aa23.55■■□□□ 1.36
PRKCH-216ENST00000555542 E5RI56 91 aa23.55■■□□□ 1.36
PRKCH-216ENST00000555542 HCRTR1O43613 425 aa23.55■■□□□ 1.36
PRKCH-216ENST00000555542 NIPSNAP2O75323 286 aa23.55■■□□□ 1.36
PRKCH-216ENST00000555542 SNRNP200O75643 2136 aaKnown RBP23.55■■□□□ 1.36
PRKCH-216ENST00000555542 TMEM63AO94886 807 aa23.55■■□□□ 1.36
PRKCH-216ENST00000555542 ESR1P03372 595 aa23.55■■□□□ 1.36
PRKCH-216ENST00000555542 OGNP20774 298 aaKnown RBP23.55■■□□□ 1.36
PRKCH-216ENST00000555542 FAM69BQ5VUD6 431 aa23.55■■□□□ 1.36
PRKCH-216ENST00000555542 ARMC3Q5W041 872 aa23.55■■□□□ 1.36
PRKCH-216ENST00000555542 CPZQ66K79 652 aa23.55■■□□□ 1.36
PRKCH-216ENST00000555542 TCTN3Q6NUS6 607 aa23.55■■□□□ 1.36
PRKCH-216ENST00000555542 TLDC1Q6P9B6 456 aa23.55■■□□□ 1.36
PRKCH-216ENST00000555542 ASB18Q6ZVZ8 466 aa23.55■■□□□ 1.36
PRKCH-216ENST00000555542 CAND1Q86VP6 1230 aaKnown RBP23.55■■□□□ 1.36
PRKCH-216ENST00000555542 MAGEC3Q8TD91 643 aa23.55■■□□□ 1.36
PRKCH-216ENST00000555542 GRK7Q8WTQ7 553 aa23.55■■□□□ 1.36
PRKCH-216ENST00000555542 BIRC8Q96P09 236 aa23.55■■□□□ 1.36
PRKCH-216ENST00000555542 OSBPL9Q96SU4 736 aa23.55■■□□□ 1.36
PRKCH-216ENST00000555542 C17orf62Q9BQA9 187 aa23.55■■□□□ 1.36
PRKCH-216ENST00000555542 NDC1Q9BTX1 674 aa23.55■■□□□ 1.36
PRKCH-216ENST00000555542 EPN3Q9H201 632 aa23.55■■□□□ 1.36
PRKCH-216ENST00000555542 IL1RAPL1Q9NZN1 696 aa23.55■■□□□ 1.36
PRKCH-216ENST00000555542 SRPK3Q9UPE1 567 aa23.55■■□□□ 1.36
PRKCH-216ENST00000555542 VPS9D1Q9Y2B5 631 aa23.55■■□□□ 1.36
PRKCH-216ENST00000555542 NFS1Q9Y697 457 aa23.55■■□□□ 1.36
PRKCH-216ENST00000555542 SPTA1P02549 2419 aa23.54■■□□□ 1.36
PRKCH-216ENST00000555542 CTAGE9A4FU28 777 aa23.54■■□□□ 1.36
PRKCH-216ENST00000555542 KIF5CO60282 957 aa23.54■■□□□ 1.36
PRKCH-216ENST00000555542 MLNP12872 115 aa23.54■■□□□ 1.36
PRKCH-216ENST00000555542 CCNFP41002 786 aa23.54■■□□□ 1.36
PRKCH-216ENST00000555542 CASRP41180 1078 aa23.54■■□□□ 1.36
PRKCH-216ENST00000555542 PTGIRP43119 386 aa23.54■■□□□ 1.36
PRKCH-216ENST00000555542 KLRB1Q12918 225 aa23.54■■□□□ 1.36
PRKCH-216ENST00000555542 THOC5Q13769 683 aaKnown RBP23.54■■□□□ 1.36
PRKCH-216ENST00000555542 GRB7Q14451 532 aa23.54■■□□□ 1.36
PRKCH-216ENST00000555542 CYP1B1Q16678 543 aa23.54■■□□□ 1.36
PRKCH-216ENST00000555542 MLIPQ5VWP3 458 aa23.54■■□□□ 1.36
PRKCH-216ENST00000555542 NEPROQ6NW34 567 aa23.54■■□□□ 1.36
PRKCH-216ENST00000555542 TEX19Q8NA77 164 aa23.54■■□□□ 1.36
PRKCH-216ENST00000555542 COG1Q8WTW3 980 aa23.54■■□□□ 1.36
PRKCH-216ENST00000555542 TRIM56Q9BRZ2 755 aaKnown RBP23.54■■□□□ 1.36
PRKCH-216ENST00000555542 MENTQ9BUN1 341 aa23.54■■□□□ 1.36
PRKCH-216ENST00000555542 TRIM55Q9BYV6 548 aa23.54■■□□□ 1.36
PRKCH-216ENST00000555542 ING2Q9H160 280 aa23.54■■□□□ 1.36
PRKCH-216ENST00000555542 NDOR1Q9UHB4 597 aa23.54■■□□□ 1.36
PRKCH-216ENST00000555542 MAD1L1Q9Y6D9 718 aa23.54■■□□□ 1.36
PRKCH-216ENST00000555542 TLN1Q9Y490 2541 aaKnown RBP23.54■■□□□ 1.36
PRKCH-216ENST00000555542 FAM237BA0A1B0GVD1 139 aa23.53■■□□□ 1.36
PRKCH-216ENST00000555542 MAGEB16A2A368 324 aa23.53■■□□□ 1.36
PRKCH-216ENST00000555542 PHF2O75151 1096 aa23.53■■□□□ 1.36
PRKCH-216ENST00000555542 C1orf105O95561 183 aa23.53■■□□□ 1.36
PRKCH-216ENST00000555542 CBSLP0DN79 551 aa23.53■■□□□ 1.36
PRKCH-216ENST00000555542 CBSP35520 551 aa23.53■■□□□ 1.36
PRKCH-216ENST00000555542 GABRA4P48169 554 aa23.53■■□□□ 1.36
PRKCH-216ENST00000555542 CCL11P51671 97 aa23.53■■□□□ 1.36
PRKCH-216ENST00000555542 COLEC12Q5KU26 742 aa23.53■■□□□ 1.36
PRKCH-216ENST00000555542 ZNF470Q6ECI4 717 aa23.53■■□□□ 1.36
PRKCH-216ENST00000555542 RHBDD2Q6NTF9 364 aa23.53■■□□□ 1.36
PRKCH-216ENST00000555542 CILP2Q8IUL8 1156 aa23.53■■□□□ 1.36
PRKCH-216ENST00000555542 REXO1L1PQ8IX06 675 aa23.53■■□□□ 1.36
PRKCH-216ENST00000555542 DNAJC22Q8N4W6 341 aa23.53■■□□□ 1.36
PRKCH-216ENST00000555542 MCUQ8NE86 351 aa23.53■■□□□ 1.36
PRKCH-216ENST00000555542 PROKR1Q8TCW9 393 aa23.53■■□□□ 1.36
PRKCH-216ENST00000555542 SERPINB12Q96P63 405 aa23.53■■□□□ 1.36
PRKCH-216ENST00000555542 DHRS4Q9BTZ2 278 aa23.53■■□□□ 1.36
PRKCH-216ENST00000555542 TRMT1Q9NXH9 659 aaKnown RBP23.53■■□□□ 1.36
PRKCH-216ENST00000555542 EURLQ9NYK6 297 aa23.53■■□□□ 1.36
PRKCH-216ENST00000555542 IFT80Q9P2H3 777 aaPredicted RBP23.53■■□□□ 1.36
PRKCH-216ENST00000555542 DHCR7Q9UBM7 475 aaKnown RBP23.53■■□□□ 1.36
PRKCH-216ENST00000555542 K7EM74 188 aa23.52■■□□□ 1.36
PRKCH-216ENST00000555542 CAPN1P07384 714 aa23.52■■□□□ 1.36
PRKCH-216ENST00000555542 DCDP81605 110 aaKnown RBP23.52■■□□□ 1.36
PRKCH-216ENST00000555542 PPP1R7Q15435 360 aa23.52■■□□□ 1.36
PRKCH-216ENST00000555542 ANKRD20A4Q4UJ75 823 aa23.52■■□□□ 1.36
PRKCH-216ENST00000555542 RAB43Q86YS6 212 aa23.52■■□□□ 1.36
PRKCH-216ENST00000555542 ZBTB2Q8N680 514 aa23.52■■□□□ 1.36
PRKCH-216ENST00000555542 ACTRT1Q8TDG2 376 aa23.52■■□□□ 1.36
PRKCH-216ENST00000555542 SLC25A23Q9BV35 468 aa23.52■■□□□ 1.36
PRKCH-216ENST00000555542 CCDC68Q9H2F9 335 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms