RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 ARL14Q8N4G2 192 aa9.62□□□□□ -0.87
PSEN1-213ENST00000555386 GPR156Q8NFN8 814 aa9.62□□□□□ -0.87
PSEN1-213ENST00000555386 GPR150Q8NGU9 434 aa9.62□□□□□ -0.87
PSEN1-213ENST00000555386 GIMAP7Q8NHV1 300 aa9.62□□□□□ -0.87
PSEN1-213ENST00000555386 GABPB2Q8TAK5 448 aaPredicted RBP9.62□□□□□ -0.87
PSEN1-213ENST00000555386 BAHD1Q8TBE0 780 aaPredicted RBP9.62□□□□□ -0.87
PSEN1-213ENST00000555386 HM13Q8TCT9 377 aa9.62□□□□□ -0.87
PSEN1-213ENST00000555386 SKA2Q8WVK7 121 aaPredicted RBP9.62□□□□□ -0.87
PSEN1-213ENST00000555386 LPGAT1Q92604 370 aa9.62□□□□□ -0.87
PSEN1-213ENST00000555386 CXorf40BQ96DE9 158 aa9.62□□□□□ -0.87
PSEN1-213ENST00000555386 C12orf66Q96MD2 445 aa9.62□□□□□ -0.87
PSEN1-213ENST00000555386 RILPQ96NA2 401 aa9.62□□□□□ -0.87
PSEN1-213ENST00000555386 NDNQ99608 321 aa9.62□□□□□ -0.87
PSEN1-213ENST00000555386 GPR22Q99680 433 aa9.62□□□□□ -0.87
PSEN1-213ENST00000555386 C20orf27Q9GZN8 174 aa9.62□□□□□ -0.87
PSEN1-213ENST00000555386 ABCG4Q9H172 646 aa9.62□□□□□ -0.87
PSEN1-213ENST00000555386 CCDC68Q9H2F9 335 aa9.62□□□□□ -0.87
PSEN1-213ENST00000555386 RHOJQ9H4E5 214 aa9.62□□□□□ -0.87
PSEN1-213ENST00000555386 DENND2DQ9H6A0 471 aaPredicted RBP9.62□□□□□ -0.87
PSEN1-213ENST00000555386 YY1AP1Q9H869 796 aa9.62□□□□□ -0.87
PSEN1-213ENST00000555386 EVA1BQ9NVM1 165 aa9.62□□□□□ -0.87
PSEN1-213ENST00000555386 TAS2R1Q9NYW7 299 aa9.62□□□□□ -0.87
PSEN1-213ENST00000555386 TMEM216Q9P0N5 145 aa9.62□□□□□ -0.87
PSEN1-213ENST00000555386 APOBEC2Q9Y235 224 aaKnown RBP9.62□□□□□ -0.87
PSEN1-213ENST00000555386 U3KQA8 63 aa9.62□□□□□ -0.87
PSEN1-213ENST00000555386 A0A096LPK6 155 aa9.61□□□□□ -0.87
PSEN1-213ENST00000555386 F8W8V4 182 aa9.61□□□□□ -0.87
PSEN1-213ENST00000555386 SNUPNO95149 360 aaKnown RBP9.61□□□□□ -0.87
PSEN1-213ENST00000555386 VIPP01282 170 aa9.61□□□□□ -0.87
PSEN1-213ENST00000555386 TPBGLP0DKB5 382 aa9.61□□□□□ -0.87
PSEN1-213ENST00000555386 F3P13726 295 aa9.61□□□□□ -0.87
PSEN1-213ENST00000555386 CCR7P32248 378 aa9.61□□□□□ -0.87
PSEN1-213ENST00000555386 HALP42357 657 aa9.61□□□□□ -0.87
PSEN1-213ENST00000555386 ACADVLP49748 655 aa9.61□□□□□ -0.87
PSEN1-213ENST00000555386 OR1D5P58170 312 aa9.61□□□□□ -0.87
PSEN1-213ENST00000555386 HHEXQ03014 270 aa9.61□□□□□ -0.87
PSEN1-213ENST00000555386 METRNLQ641Q3 311 aa9.61□□□□□ -0.87
PSEN1-213ENST00000555386 IYDQ6PHW0 289 aa9.61□□□□□ -0.87
PSEN1-213ENST00000555386 RINLQ6ZS11 566 aa9.61□□□□□ -0.87
PSEN1-213ENST00000555386 ZCCHC23Q6ZST2 131 aa9.61□□□□□ -0.87
PSEN1-213ENST00000555386 MARCH9Q86YJ5 346 aa9.61□□□□□ -0.87
PSEN1-213ENST00000555386 C10orf107Q8IVU9 208 aa9.61□□□□□ -0.87
PSEN1-213ENST00000555386 GPATCH11Q8N954 259 aa9.61□□□□□ -0.87
PSEN1-213ENST00000555386 FAM181AQ8N9Y4 354 aa9.61□□□□□ -0.87
PSEN1-213ENST00000555386 PHC3Q8NDX5 983 aa9.61□□□□□ -0.87
PSEN1-213ENST00000555386 VPS39Q96JC1 886 aa9.61□□□□□ -0.87
PSEN1-213ENST00000555386 TSNARE1Q96NA8 513 aa9.61□□□□□ -0.87
PSEN1-213ENST00000555386 BIRC8Q96P09 236 aa9.61□□□□□ -0.87
PSEN1-213ENST00000555386 DCBLD2Q96PD2 775 aa9.61□□□□□ -0.87
PSEN1-213ENST00000555386 TCF12Q99081 682 aa9.61□□□□□ -0.87
PSEN1-213ENST00000555386 SORT1Q99523 831 aa9.61□□□□□ -0.87
PSEN1-213ENST00000555386 CCDC3Q9BQI4 270 aa9.61□□□□□ -0.87
PSEN1-213ENST00000555386 P2RY12Q9H244 342 aa9.61□□□□□ -0.87
PSEN1-213ENST00000555386 COG4Q9H9E3 785 aa9.61□□□□□ -0.87
PSEN1-213ENST00000555386 INTS10Q9NVR2 710 aaKnown RBP9.61□□□□□ -0.87
PSEN1-213ENST00000555386 GALPQ9UBC7 116 aa9.61□□□□□ -0.87
PSEN1-213ENST00000555386 CPNE7Q9UBL6 633 aa9.61□□□□□ -0.87
PSEN1-213ENST00000555386 DNMT3AQ9Y6K1 912 aaPredicted RBP9.61□□□□□ -0.87
PSEN1-213ENST00000555386 PTPRBP23467 1997 aa9.61□□□□□ -0.87
PSEN1-213ENST00000555386 EME2A4GXA9 379 aaPredicted RBP9.6□□□□□ -0.87
PSEN1-213ENST00000555386 B2RBV5 119 aa9.6□□□□□ -0.87
PSEN1-213ENST00000555386 QSOX1O00391 747 aa9.6□□□□□ -0.87
PSEN1-213ENST00000555386 PPM1DO15297 605 aa9.6□□□□□ -0.87
PSEN1-213ENST00000555386 ITM2AO43736 263 aa9.6□□□□□ -0.87
PSEN1-213ENST00000555386 TRIM13O60858 407 aa9.6□□□□□ -0.87
PSEN1-213ENST00000555386 RFPL3O75679 317 aa9.6□□□□□ -0.87
PSEN1-213ENST00000555386 TOP3BO95985 862 aaKnown RBP9.6□□□□□ -0.87
PSEN1-213ENST00000555386 AHSGP02765 367 aa9.6□□□□□ -0.87
PSEN1-213ENST00000555386 C2P06681 752 aa9.6□□□□□ -0.87
PSEN1-213ENST00000555386 KITP10721 976 aa9.6□□□□□ -0.87
PSEN1-213ENST00000555386 PKMP14618 531 aaKnown RBP9.6□□□□□ -0.87
PSEN1-213ENST00000555386 SLC2A4P14672 509 aa9.6□□□□□ -0.87
PSEN1-213ENST00000555386 PRDX6P30041 224 aa9.6□□□□□ -0.87
PSEN1-213ENST00000555386 PGM1P36871 562 aa9.6□□□□□ -0.87
PSEN1-213ENST00000555386 SLC19A1P41440 591 aa9.6□□□□□ -0.87
PSEN1-213ENST00000555386 PGGT1BP53609 377 aa9.6□□□□□ -0.87
PSEN1-213ENST00000555386 ASPHQ12797 758 aa9.6□□□□□ -0.87
PSEN1-213ENST00000555386 FOXC1Q12948 553 aa9.6□□□□□ -0.87
PSEN1-213ENST00000555386 ABRQ12979 859 aa9.6□□□□□ -0.87
PSEN1-213ENST00000555386 TUBB3Q13509 450 aa9.6□□□□□ -0.87
PSEN1-213ENST00000555386 RPE65Q16518 533 aa9.6□□□□□ -0.87
PSEN1-213ENST00000555386 C6orf163Q5TEZ5 329 aa9.6□□□□□ -0.87
PSEN1-213ENST00000555386 NKAIN2Q5VXU1 208 aa9.6□□□□□ -0.87
PSEN1-213ENST00000555386 METTL21CQ5VZV1 264 aa9.6□□□□□ -0.87
PSEN1-213ENST00000555386 ZNF549Q6P9A3 640 aa9.6□□□□□ -0.87
PSEN1-213ENST00000555386 OGFOD3Q6PK18 319 aa9.6□□□□□ -0.87
PSEN1-213ENST00000555386 KIAA0408Q6ZU52 694 aa9.6□□□□□ -0.87
PSEN1-213ENST00000555386 CMC1Q7Z7K0 106 aa9.6□□□□□ -0.87
PSEN1-213ENST00000555386 SLC9B2Q86UD5 537 aa9.6□□□□□ -0.87
PSEN1-213ENST00000555386 ZC3HC1Q86WB0 502 aaKnown RBP9.6□□□□□ -0.87
PSEN1-213ENST00000555386 TREML1Q86YW5 311 aa9.6□□□□□ -0.87
PSEN1-213ENST00000555386 VRK3Q8IV63 474 aa9.6□□□□□ -0.87
PSEN1-213ENST00000555386 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.6□□□□□ -0.87
PSEN1-213ENST00000555386 SFRP1Q8N474 314 aa9.6□□□□□ -0.87
PSEN1-213ENST00000555386 CHCHD4Q8N4Q1 142 aa9.6□□□□□ -0.87
PSEN1-213ENST00000555386 SIDT2Q8NBJ9 832 aaKnown RBP9.6□□□□□ -0.87
PSEN1-213ENST00000555386 C2CD4AQ8NCU7 369 aaPredicted RBP9.6□□□□□ -0.87
PSEN1-213ENST00000555386 TMEM159Q96B96 161 aa9.6□□□□□ -0.87
PSEN1-213ENST00000555386 PRR11Q96HE9 360 aaPredicted RBP9.6□□□□□ -0.87
PSEN1-213ENST00000555386 LINC00615Q96LM1 132 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms