RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 PRAMEF17Q5VTA0 474 aa10.3□□□□□ -0.76
SHMT2-213ENST00000554600 SYT10Q6XYQ8 523 aa10.3□□□□□ -0.76
SHMT2-213ENST00000554600 FAM20CQ8IXL6 584 aa10.3□□□□□ -0.76
SHMT2-213ENST00000554600 LMNTD2Q8IXW0 634 aa10.3□□□□□ -0.76
SHMT2-213ENST00000554600 GPR135Q8IZ08 494 aa10.3□□□□□ -0.76
SHMT2-213ENST00000554600 OR1L3Q8NH93 324 aa10.3□□□□□ -0.76
SHMT2-213ENST00000554600 MAGEC3Q8TD91 643 aa10.3□□□□□ -0.76
SHMT2-213ENST00000554600 CT55Q8WUE5 264 aa10.3□□□□□ -0.76
SHMT2-213ENST00000554600 TTC9Q92623 222 aa10.3□□□□□ -0.76
SHMT2-213ENST00000554600 PWWP2AQ96N64 755 aa10.3□□□□□ -0.76
SHMT2-213ENST00000554600 OR2A14Q96R47 310 aa10.3□□□□□ -0.76
SHMT2-213ENST00000554600 EBNA1BP2Q99848 306 aaKnown RBP10.3□□□□□ -0.76
SHMT2-213ENST00000554600 NAT9Q9BTE0 207 aa10.3□□□□□ -0.76
SHMT2-213ENST00000554600 RAB11FIP5Q9BXF6 653 aa10.3□□□□□ -0.76
SHMT2-213ENST00000554600 ACTR5Q9H9F9 607 aaPredicted RBP10.3□□□□□ -0.76
SHMT2-213ENST00000554600 SYTL2Q9HCH5 934 aa10.3□□□□□ -0.76
SHMT2-213ENST00000554600 LHX9Q9NQ69 397 aa10.3□□□□□ -0.76
SHMT2-213ENST00000554600 LATS2Q9NRM7 1088 aa10.3□□□□□ -0.76
SHMT2-213ENST00000554600 GALPQ9UBC7 116 aa10.3□□□□□ -0.76
SHMT2-213ENST00000554600 SERTAD3Q9UJW9 196 aa10.3□□□□□ -0.76
SHMT2-213ENST00000554600 KCND3Q9UK17 655 aa10.3□□□□□ -0.76
SHMT2-213ENST00000554600 PCDHB3Q9Y5E6 796 aa10.3□□□□□ -0.76
SHMT2-213ENST00000554600 KRT87PA6NCN2 255 aa10.29□□□□□ -0.76
SHMT2-213ENST00000554600 TK2O00142 265 aa10.29□□□□□ -0.76
SHMT2-213ENST00000554600 RASGRF2O14827 1237 aa10.29□□□□□ -0.76
SHMT2-213ENST00000554600 FANCGO15287 622 aa10.29□□□□□ -0.76
SHMT2-213ENST00000554600 VPS26AO75436 327 aa10.29□□□□□ -0.76
SHMT2-213ENST00000554600 HAUS5O94927 633 aa10.29□□□□□ -0.76
SHMT2-213ENST00000554600 C1orf105O95561 183 aa10.29□□□□□ -0.76
SHMT2-213ENST00000554600 ITGB2P05107 769 aa10.29□□□□□ -0.76
SHMT2-213ENST00000554600 KLK3P07288 261 aaPredicted RBP10.29□□□□□ -0.76
SHMT2-213ENST00000554600 MAGP20916 626 aa10.29□□□□□ -0.76
SHMT2-213ENST00000554600 IVDP26440 423 aa10.29□□□□□ -0.76
SHMT2-213ENST00000554600 PEBP1P30086 187 aaKnown RBP10.29□□□□□ -0.76
SHMT2-213ENST00000554600 ELK3P41970 407 aa10.29□□□□□ -0.76
SHMT2-213ENST00000554600 CARSP49589 748 aaKnown RBP10.29□□□□□ -0.76
SHMT2-213ENST00000554600 ITGA1P56199 1179 aa10.29□□□□□ -0.76
SHMT2-213ENST00000554600 ARL4CP56559 192 aa10.29□□□□□ -0.76
SHMT2-213ENST00000554600 ETF1P62495 437 aaKnown RBP10.29□□□□□ -0.76
SHMT2-213ENST00000554600 C2orf54Q08AI8 447 aa10.29□□□□□ -0.76
SHMT2-213ENST00000554600 CDC20Q12834 499 aa10.29□□□□□ -0.76
SHMT2-213ENST00000554600 DNASE1L3Q13609 305 aa10.29□□□□□ -0.76
SHMT2-213ENST00000554600 CUL1Q13616 776 aa10.29□□□□□ -0.76
SHMT2-213ENST00000554600 SF1Q15637 639 aaKnown RBP10.29□□□□□ -0.76
SHMT2-213ENST00000554600 TBR1Q16650 682 aa10.29□□□□□ -0.76
SHMT2-213ENST00000554600 SLC5A12Q1EHB4 618 aa10.29□□□□□ -0.76
SHMT2-213ENST00000554600 KLHL38Q2WGJ6 581 aa10.29□□□□□ -0.76
SHMT2-213ENST00000554600 CCSMST1Q4G0I0 132 aa10.29□□□□□ -0.76
SHMT2-213ENST00000554600 ACSBG2Q5FVE4 666 aa10.29□□□□□ -0.76
SHMT2-213ENST00000554600 FAM199XQ6PEV8 388 aaPredicted RBP10.29□□□□□ -0.76
SHMT2-213ENST00000554600 PCSK4Q6UW60 755 aa10.29□□□□□ -0.76
SHMT2-213ENST00000554600 CDHR3Q6ZTQ4 885 aa10.29□□□□□ -0.76
SHMT2-213ENST00000554600 ANKMY2Q8IV38 441 aa10.29□□□□□ -0.76
SHMT2-213ENST00000554600 LINC01555Q8NAE3 123 aa10.29□□□□□ -0.76
SHMT2-213ENST00000554600 LSM14AQ8ND56 463 aaKnown RBP10.29□□□□□ -0.76
SHMT2-213ENST00000554600 OR2L8Q8NGY9 312 aa10.29□□□□□ -0.76
SHMT2-213ENST00000554600 SLC22A18Q96BI1 424 aa10.29□□□□□ -0.76
SHMT2-213ENST00000554600 WBP1Q96G27 269 aa10.29□□□□□ -0.76
SHMT2-213ENST00000554600 TCTN2Q96GX1 697 aa10.29□□□□□ -0.76
SHMT2-213ENST00000554600 GPR21Q99679 349 aa10.29□□□□□ -0.76
SHMT2-213ENST00000554600 DPH5Q9H2P9 285 aa10.29□□□□□ -0.76
SHMT2-213ENST00000554600 INTS7Q9NVH2 962 aaKnown RBP10.29□□□□□ -0.76
SHMT2-213ENST00000554600 ZC3H7BQ9UGR2 993 aaKnown RBP10.29□□□□□ -0.76
SHMT2-213ENST00000554600 KLHL20Q9Y2M5 609 aa10.29□□□□□ -0.76
SHMT2-213ENST00000554600 SNX24Q9Y343 169 aa10.29□□□□□ -0.76
SHMT2-213ENST00000554600 NUP210LQ5VU65 1888 aa10.29□□□□□ -0.76
SHMT2-213ENST00000554600 ZNF462Q96JM2 2506 aa10.29□□□□□ -0.76
SHMT2-213ENST00000554600 DOCK10Q96BY6 2186 aa10.28□□□□□ -0.76
SHMT2-213ENST00000554600 KALRNO60229 2985 aa10.28□□□□□ -0.76
SHMT2-213ENST00000554600 CDC14CA4D256 554 aa10.28□□□□□ -0.76
SHMT2-213ENST00000554600 E7EQ34 232 aa10.28□□□□□ -0.76
SHMT2-213ENST00000554600 SMAPO00193 183 aa10.28□□□□□ -0.76
SHMT2-213ENST00000554600 NDC80O14777 642 aa10.28□□□□□ -0.76
SHMT2-213ENST00000554600 OR2B3O76000 313 aa10.28□□□□□ -0.76
SHMT2-213ENST00000554600 SEC31AO94979 1220 aaKnown RBP10.28□□□□□ -0.76
SHMT2-213ENST00000554600 SYF2O95926 243 aaKnown RBP10.28□□□□□ -0.76
SHMT2-213ENST00000554600 CATP04040 527 aaKnown RBP10.28□□□□□ -0.76
SHMT2-213ENST00000554600 FAM87AP0C7U9 286 aa10.28□□□□□ -0.76
SHMT2-213ENST00000554600 F8A1P23610 371 aa10.28□□□□□ -0.76
SHMT2-213ENST00000554600 ATP5DP30049 168 aa10.28□□□□□ -0.76
SHMT2-213ENST00000554600 RPS15P62841 145 aaKnown RBP10.28□□□□□ -0.76
SHMT2-213ENST00000554600 C19orf57Q0VDD7 668 aa10.28□□□□□ -0.76
SHMT2-213ENST00000554600 PDIA2Q13087 525 aaKnown RBP10.28□□□□□ -0.76
SHMT2-213ENST00000554600 CALCOCO2Q13137 446 aa10.28□□□□□ -0.76
SHMT2-213ENST00000554600 GPS2Q13227 327 aa10.28□□□□□ -0.76
SHMT2-213ENST00000554600 ERV3-1Q14264 604 aa10.28□□□□□ -0.76
SHMT2-213ENST00000554600 GRB7Q14451 532 aa10.28□□□□□ -0.76
SHMT2-213ENST00000554600 ZIC1Q15915 447 aa10.28□□□□□ -0.76
SHMT2-213ENST00000554600 DEFB109BQ30KR1 87 aa10.28□□□□□ -0.76
SHMT2-213ENST00000554600 ATP1A1-AS1Q5TC04 95 aa10.28□□□□□ -0.76
SHMT2-213ENST00000554600 HIBCHQ6NVY1 386 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-213ENST00000554600 ZNF549Q6P9A3 640 aa10.28□□□□□ -0.76
SHMT2-213ENST00000554600 BORAQ6PGQ7 559 aa10.28□□□□□ -0.76
SHMT2-213ENST00000554600 IGDCC3Q8IVU1 814 aa10.28□□□□□ -0.76
SHMT2-213ENST00000554600 INPP5DQ92835 1189 aa10.28□□□□□ -0.76
SHMT2-213ENST00000554600 CERS2Q96G23 380 aa10.28□□□□□ -0.76
SHMT2-213ENST00000554600 CATSPER2Q96P56 530 aa10.28□□□□□ -0.76
SHMT2-213ENST00000554600 NDNQ99608 321 aa10.28□□□□□ -0.76
SHMT2-213ENST00000554600 SLC30A3Q99726 388 aa10.28□□□□□ -0.76
SHMT2-213ENST00000554600 TWSG1Q9GZX9 223 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms