RNA–Protein interactions for RNA: ENST00000553831.5

PRKCH-207, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-207ENST00000553831 FAM60AQ9NP50 221 aa13.73□□□□□ -0.21
PRKCH-207ENST00000553831 SLC17A6Q9P2U8 582 aa13.73□□□□□ -0.21
PRKCH-207ENST00000553831 SLC39A10Q9ULF5 831 aa13.73□□□□□ -0.21
PRKCH-207ENST00000553831 SNX24Q9Y343 169 aa13.73□□□□□ -0.21
PRKCH-207ENST00000553831 MRFAP1Q9Y605 127 aa13.73□□□□□ -0.21
PRKCH-207ENST00000553831 MRPS18BQ9Y676 258 aaKnown RBP13.73□□□□□ -0.21
PRKCH-207ENST00000553831 TEX264Q9Y6I9 313 aa13.73□□□□□ -0.21
PRKCH-207ENST00000553831 SNRNP200O75643 2136 aaKnown RBP13.72□□□□□ -0.21
PRKCH-207ENST00000553831 SPTBP11277 2137 aa13.72□□□□□ -0.21
PRKCH-207ENST00000553831 FAM187AA6NFU0 413 aa13.72□□□□□ -0.21
PRKCH-207ENST00000553831 ARHGEF33A8MVX0 844 aa13.72□□□□□ -0.21
PRKCH-207ENST00000553831 TERTO14746 1132 aaKnown RBP13.72□□□□□ -0.21
PRKCH-207ENST00000553831 MAP3K7O43318 606 aa13.72□□□□□ -0.21
PRKCH-207ENST00000553831 MATN4O95460 622 aa13.72□□□□□ -0.21
PRKCH-207ENST00000553831 MT-ND3P03897 115 aa13.72□□□□□ -0.21
PRKCH-207ENST00000553831 GABRB3P28472 473 aa13.72□□□□□ -0.21
PRKCH-207ENST00000553831 DLSTP36957 453 aa13.72□□□□□ -0.21
PRKCH-207ENST00000553831 CCNFP41002 786 aa13.72□□□□□ -0.21
PRKCH-207ENST00000553831 FASTKD3Q14CZ7 662 aaKnown RBP13.72□□□□□ -0.21
PRKCH-207ENST00000553831 DEFB110Q30KQ9 67 aa13.72□□□□□ -0.21
PRKCH-207ENST00000553831 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.72□□□□□ -0.21
PRKCH-207ENST00000553831 STEAP4Q687X5 459 aa13.72□□□□□ -0.21
PRKCH-207ENST00000553831 TRMT10BQ6PF06 316 aaKnown RBP13.72□□□□□ -0.21
PRKCH-207ENST00000553831 CNTN4Q8IWV2 1026 aa13.72□□□□□ -0.21
PRKCH-207ENST00000553831 LSM14AQ8ND56 463 aaKnown RBP13.72□□□□□ -0.21
PRKCH-207ENST00000553831 CD200R1Q8TD46 325 aa13.72□□□□□ -0.21
PRKCH-207ENST00000553831 CT55Q8WUE5 264 aa13.72□□□□□ -0.21
PRKCH-207ENST00000553831 STARD8Q92502 1023 aa13.72□□□□□ -0.21
PRKCH-207ENST00000553831 EXTL1Q92935 676 aa13.72□□□□□ -0.21
PRKCH-207ENST00000553831 LRRC39Q96DD0 335 aa13.72□□□□□ -0.21
PRKCH-207ENST00000553831 NDNQ99608 321 aa13.72□□□□□ -0.21
PRKCH-207ENST00000553831 GPR21Q99679 349 aa13.72□□□□□ -0.21
PRKCH-207ENST00000553831 RAB11FIP5Q9BXF6 653 aa13.72□□□□□ -0.21
PRKCH-207ENST00000553831 DPH5Q9H2P9 285 aa13.72□□□□□ -0.21
PRKCH-207ENST00000553831 AKIRIN1Q9H9L7 192 aaPredicted RBP13.72□□□□□ -0.21
PRKCH-207ENST00000553831 SYTL2Q9HCH5 934 aa13.72□□□□□ -0.21
PRKCH-207ENST00000553831 LHX9Q9NQ69 397 aa13.72□□□□□ -0.21
PRKCH-207ENST00000553831 KLHL42Q9P2K6 505 aa13.72□□□□□ -0.21
PRKCH-207ENST00000553831 ZC3H7BQ9UGR2 993 aaKnown RBP13.72□□□□□ -0.21
PRKCH-207ENST00000553831 COMMD10Q9Y6G5 202 aa13.72□□□□□ -0.21
PRKCH-207ENST00000553831 KALRNO60229 2985 aa13.72□□□□□ -0.21
PRKCH-207ENST00000553831 PIEZO2Q9H5I5 2752 aa13.71□□□□□ -0.21
PRKCH-207ENST00000553831 EIF4E1BA6NMX2 242 aaKnown RBP13.71□□□□□ -0.21
PRKCH-207ENST00000553831 NKX2-8O15522 239 aa13.71□□□□□ -0.21
PRKCH-207ENST00000553831 HCRTR1O43613 425 aa13.71□□□□□ -0.21
PRKCH-207ENST00000553831 PSIP1O75475 530 aaKnown RBP13.71□□□□□ -0.21
PRKCH-207ENST00000553831 PRB1P04280 392 aa13.71□□□□□ -0.21
PRKCH-207ENST00000553831 CCNYL3P0C7X3 344 aa13.71□□□□□ -0.21
PRKCH-207ENST00000553831 PRKAR1AP10644 381 aa13.71□□□□□ -0.21
PRKCH-207ENST00000553831 CYP2A7P20853 494 aa13.71□□□□□ -0.21
PRKCH-207ENST00000553831 MAGP20916 626 aa13.71□□□□□ -0.21
PRKCH-207ENST00000553831 GABRA4P48169 554 aa13.71□□□□□ -0.21
PRKCH-207ENST00000553831 CARSP49589 748 aaKnown RBP13.71□□□□□ -0.21
PRKCH-207ENST00000553831 ITGA1P56199 1179 aa13.71□□□□□ -0.21
PRKCH-207ENST00000553831 GPS2Q13227 327 aa13.71□□□□□ -0.21
PRKCH-207ENST00000553831 DNASE1L3Q13609 305 aa13.71□□□□□ -0.21
PRKCH-207ENST00000553831 NEK10Q6ZWH5 1172 aa13.71□□□□□ -0.21
PRKCH-207ENST00000553831 MAATS1Q7Z4T9 603 aa13.71□□□□□ -0.21
PRKCH-207ENST00000553831 ANKMY2Q8IV38 441 aa13.71□□□□□ -0.21
PRKCH-207ENST00000553831 SLC38A9Q8NBW4 561 aa13.71□□□□□ -0.21
PRKCH-207ENST00000553831 GABPB2Q8TAK5 448 aaPredicted RBP13.71□□□□□ -0.21
PRKCH-207ENST00000553831 MAGEC3Q8TD91 643 aa13.71□□□□□ -0.21
PRKCH-207ENST00000553831 WBP1Q96G27 269 aa13.71□□□□□ -0.21
PRKCH-207ENST00000553831 TCTN2Q96GX1 697 aa13.71□□□□□ -0.21
PRKCH-207ENST00000553831 C16orf45Q96MC5 204 aaPredicted RBP13.71□□□□□ -0.21
PRKCH-207ENST00000553831 ERP44Q9BS26 406 aa13.71□□□□□ -0.21
PRKCH-207ENST00000553831 CHRNA10Q9GZZ6 450 aa13.71□□□□□ -0.21
PRKCH-207ENST00000553831 PPANQ9NQ55 473 aaKnown RBP13.71□□□□□ -0.21
PRKCH-207ENST00000553831 SPATA7Q9P0W8 599 aa13.71□□□□□ -0.21
PRKCH-207ENST00000553831 PADI1Q9ULC6 663 aa13.71□□□□□ -0.21
PRKCH-207ENST00000553831 KLHL20Q9Y2M5 609 aa13.71□□□□□ -0.21
PRKCH-207ENST00000553831 DHRS7Q9Y394 339 aa13.71□□□□□ -0.21
PRKCH-207ENST00000553831 PCDHB3Q9Y5E6 796 aa13.71□□□□□ -0.21
PRKCH-207ENST00000553831 E7ESA3 106 aa13.7□□□□□ -0.22
PRKCH-207ENST00000553831 NDC80O14777 642 aa13.7□□□□□ -0.22
PRKCH-207ENST00000553831 PRICKLE3O43900 615 aaPredicted RBP13.7□□□□□ -0.22
PRKCH-207ENST00000553831 VPS26AO75436 327 aa13.7□□□□□ -0.22
PRKCH-207ENST00000553831 AHSGP02765 367 aa13.7□□□□□ -0.22
PRKCH-207ENST00000553831 ITGB2P05107 769 aa13.7□□□□□ -0.22
PRKCH-207ENST00000553831 MPC1LP0DKB6 136 aa13.7□□□□□ -0.22
PRKCH-207ENST00000553831 ENO3P13929 434 aaPredicted RBP13.7□□□□□ -0.22
PRKCH-207ENST00000553831 PSMB5P28074 263 aa13.7□□□□□ -0.22
PRKCH-207ENST00000553831 TIAL1Q01085 375 aaKnown RBP eCLIP13.7□□□□□ -0.22
PRKCH-207ENST00000553831 CDC20Q12834 499 aa13.7□□□□□ -0.22
PRKCH-207ENST00000553831 PDIA2Q13087 525 aaKnown RBP13.7□□□□□ -0.22
PRKCH-207ENST00000553831 LY6DQ14210 128 aa13.7□□□□□ -0.22
PRKCH-207ENST00000553831 TBR1Q16650 682 aa13.7□□□□□ -0.22
PRKCH-207ENST00000553831 LINC00303Q3SY05 128 aa13.7□□□□□ -0.22
PRKCH-207ENST00000553831 RBM20Q5T481 1227 aaKnown RBP13.7□□□□□ -0.22
PRKCH-207ENST00000553831 TEDDM1Q5T9Z0 273 aa13.7□□□□□ -0.22
PRKCH-207ENST00000553831 ATP1A1-AS1Q5TC04 95 aa13.7□□□□□ -0.22
PRKCH-207ENST00000553831 FAM199XQ6PEV8 388 aaPredicted RBP13.7□□□□□ -0.22
PRKCH-207ENST00000553831 KIAA0408Q6ZU52 694 aa13.7□□□□□ -0.22
PRKCH-207ENST00000553831 PIWIL4Q7Z3Z4 852 aaKnown RBP13.7□□□□□ -0.22
PRKCH-207ENST00000553831 CPNE9Q8IYJ1 553 aa13.7□□□□□ -0.22
PRKCH-207ENST00000553831 RAB42Q8N4Z0 105 aa13.7□□□□□ -0.22
PRKCH-207ENST00000553831 BBOF1Q8ND07 529 aa13.7□□□□□ -0.22
PRKCH-207ENST00000553831 FBXO36Q8NEA4 188 aa13.7□□□□□ -0.22
PRKCH-207ENST00000553831 HMGCLL1Q8TB92 370 aa13.7□□□□□ -0.22
PRKCH-207ENST00000553831 N4BP2L2Q92802 583 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms