RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 DCKP27707 260 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 CHRNB3Q05901 458 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 AQP6Q13520 282 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 TYSND1Q2T9J0 566 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 PAGE2BQ5JRK9 111 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 SPANXN4Q5MJ08 99 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 TMEM236Q5W0B7 351 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 TBC1D21Q8IYX1 336 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 ZNF366Q8N895 744 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 GLMNQ92990 594 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 EGLN2Q96KS0 407 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 ATOH8Q96SQ7 321 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 FUNDC2Q9BWH2 189 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 RAD21L1Q9H4I0 556 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 IKZF5Q9H5V7 419 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 NTN4Q9HB63 628 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 ASAH2Q9NR71 780 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 PRKAG2Q9UGJ0 569 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 BAG5Q9UL15 447 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 PCDHGA11Q9Y5H2 935 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 RAI2Q9Y5P3 530 aa10.84□□□□□ -0.67
LINC00661-204ENST00000549354 DOCK6Q96HP0 2047 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 SYCE1LA8MT33 242 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 LEFTY2O00292 366 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 CBFA2T3O75081 653 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 PAPLNO95428 1278 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 GPIP06744 558 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 CSKP41240 450 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 CCR2P41597 374 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 HALP42357 657 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 MAP2K4P45985 399 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 SUOXP51687 545 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 HK3P52790 923 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 ERVPABLB-1P60509 514 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 NKG7Q16617 165 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 SMN1Q16637 294 aaKnown RBP10.83□□□□□ -0.68
LINC00661-204ENST00000549354 C6orf136Q5SQH8 315 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 ZNF648Q5T619 568 aaPredicted RBP10.83□□□□□ -0.68
LINC00661-204ENST00000549354 BROXQ5VW32 411 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 KANK2Q63ZY3 851 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 SLC44A2Q8IWA5 706 aaPredicted RBP10.83□□□□□ -0.68
LINC00661-204ENST00000549354 BBS7Q8IWZ6 715 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 OR52J3Q8NH60 311 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 PROKR1Q8TCW9 393 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 SLC22A17Q8WUG5 538 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 STON2Q8WXE9 905 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 L3HYPDHQ96EM0 354 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 IPPKQ9H8X2 491 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 WWOXQ9NZC7 414 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.83□□□□□ -0.68
LINC00661-204ENST00000549354 TCRBV5S2A0A599 114 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 BBIP1A8MTZ0 92 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 G3V2T6 193 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 PRKD3O94806 890 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 MLYCDO95822 493 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 TNFRSF1BP20333 461 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 CD97P48960 835 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 VBP1P61758 197 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 GPRIN3Q6ZVF9 776 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 SPRED1Q7Z699 444 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 RBM23Q86U06 439 aaKnown RBP10.83□□□□□ -0.68
LINC00661-204ENST00000549354 METTL3Q86U44 580 aaKnown RBP10.83□□□□□ -0.68
LINC00661-204ENST00000549354 OR4F6Q8NGB9 312 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 HPS1Q92902 700 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.83□□□□□ -0.68
LINC00661-204ENST00000549354 TPD52L3Q96J77 140 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 NEURL2Q9BR09 285 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 VAPAQ9P0L0 249 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 ADGRE2Q9UHX3 823 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 A0A1W2PRU2 124 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 LINC01553A4QN01 128 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 ANKRD66B4E2M5 251 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 H0Y858 1186 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 TLL1O43897 1013 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 POU2F1P14859 743 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 EN2P19622 333 aaPredicted RBP10.83□□□□□ -0.68
LINC00661-204ENST00000549354 PSMB9P28065 219 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 HLCSP50747 726 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 AP1S1P61966 158 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 CAMK1Q14012 370 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 Q6ZPB1 254 aaPredicted RBP10.83□□□□□ -0.68
LINC00661-204ENST00000549354 NCCRP1Q6ZVX7 275 aaPredicted RBP10.83□□□□□ -0.68
LINC00661-204ENST00000549354 ADGRG2Q8IZP9 1017 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 C8orf59Q8N0T1 100 aaPredicted RBP10.83□□□□□ -0.68
LINC00661-204ENST00000549354 LEMD2Q8NC56 503 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 ABHD11Q8NFV4 315 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 POF1BQ8WVV4 589 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 FUBP1Q96AE4 644 aaKnown RBP10.83□□□□□ -0.68
LINC00661-204ENST00000549354 SMAD5Q99717 465 aaKnown RBP10.83□□□□□ -0.68
LINC00661-204ENST00000549354 DPH2Q9BQC3 489 aaPredicted RBP10.83□□□□□ -0.68
LINC00661-204ENST00000549354 ADGRE3Q9BY15 652 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 POPDC3Q9HBV1 291 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 ZDHHC4Q9NPG8 344 aa10.83□□□□□ -0.68
LINC00661-204ENST00000549354 KIAA1522Q9P206 1035 aaPredicted RBP10.83□□□□□ -0.68
LINC00661-204ENST00000549354 LEF1Q9UJU2 399 aaPredicted RBP10.83□□□□□ -0.68
LINC00661-204ENST00000549354 CACNA1CQ13936 2221 aa10.82□□□□□ -0.68
LINC00661-204ENST00000549354 C2orf81A6NN90 581 aa10.82□□□□□ -0.68
LINC00661-204ENST00000549354 H7C0S8 307 aa10.82□□□□□ -0.68
LINC00661-204ENST00000549354 BCAS1O75363 584 aaPredicted RBP10.82□□□□□ -0.68
LINC00661-204ENST00000549354 DEAF1O75398 565 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms