RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 RPS14P62263 151 aaKnown RBP15.42■□□□□ 0.06
LDLR-204ENST00000545707 PHEXP78562 749 aa15.42■□□□□ 0.06
LDLR-204ENST00000545707 MAD2L1Q13257 205 aaPredicted RBP15.42■□□□□ 0.06
LDLR-204ENST00000545707 LAIR1Q6GTX8 287 aa15.42■□□□□ 0.06
LDLR-204ENST00000545707 FAM43BQ6ZT52 329 aaPredicted RBP15.42■□□□□ 0.06
LDLR-204ENST00000545707 CEP68Q76N32 757 aa15.42■□□□□ 0.06
LDLR-204ENST00000545707 IGFN1Q86VF2 1251 aa15.42■□□□□ 0.06
LDLR-204ENST00000545707 SVOPLQ8N434 492 aa15.42■□□□□ 0.06
LDLR-204ENST00000545707 GLB1L3Q8NCI6 653 aaPredicted RBP15.42■□□□□ 0.06
LDLR-204ENST00000545707 SKA2Q8WVK7 121 aaPredicted RBP15.42■□□□□ 0.06
LDLR-204ENST00000545707 ERLEC1Q96DZ1 483 aa15.42■□□□□ 0.06
LDLR-204ENST00000545707 USE1Q9NZ43 259 aa15.42■□□□□ 0.06
LDLR-204ENST00000545707 SELENONQ9NZV5 590 aa15.42■□□□□ 0.06
LDLR-204ENST00000545707 PPT2Q9UMR5 302 aa15.42■□□□□ 0.06
LDLR-204ENST00000545707 ABCG2Q9UNQ0 655 aa15.42■□□□□ 0.06
LDLR-204ENST00000545707 OR51B4Q9Y5P0 310 aa15.42■□□□□ 0.06
LDLR-204ENST00000545707 SNX5Q9Y5X3 404 aa15.42■□□□□ 0.06
LDLR-204ENST00000545707 FUOMA2VDF0 154 aa15.42■□□□□ 0.06
LDLR-204ENST00000545707 EBLN1P0CF75 366 aa15.42■□□□□ 0.06
LDLR-204ENST00000545707 PCMT1P22061 227 aa15.42■□□□□ 0.06
LDLR-204ENST00000545707 S100A3P33764 101 aa15.42■□□□□ 0.06
LDLR-204ENST00000545707 IDUAP35475 653 aa15.42■□□□□ 0.06
LDLR-204ENST00000545707 NRIP1P48552 1158 aa15.42■□□□□ 0.06
LDLR-204ENST00000545707 EMX1Q04741 257 aaPredicted RBP15.42■□□□□ 0.06
LDLR-204ENST00000545707 CDK5R2Q13319 367 aa15.42■□□□□ 0.06
LDLR-204ENST00000545707 CDH18Q13634 790 aa15.42■□□□□ 0.06
LDLR-204ENST00000545707 INO80DQ53TQ3 878 aaPredicted RBP15.42■□□□□ 0.06
LDLR-204ENST00000545707 ZNF691Q5VV52 312 aa15.42■□□□□ 0.06
LDLR-204ENST00000545707 GRAMD4Q6IC98 578 aa15.42■□□□□ 0.06
LDLR-204ENST00000545707 DOK6Q6PKX4 331 aa15.42■□□□□ 0.06
LDLR-204ENST00000545707 LRRC8DQ7L1W4 858 aa15.42■□□□□ 0.06
LDLR-204ENST00000545707 TRIM74Q86UV6 250 aa15.42■□□□□ 0.06
LDLR-204ENST00000545707 TRIM73Q86UV7 250 aa15.42■□□□□ 0.06
LDLR-204ENST00000545707 ZCCHC7Q8N3Z6 543 aaKnown RBP15.42■□□□□ 0.06
LDLR-204ENST00000545707 SELENOMQ8WWX9 145 aa15.42■□□□□ 0.06
LDLR-204ENST00000545707 USP7Q93009 1102 aa15.42■□□□□ 0.06
LDLR-204ENST00000545707 MUL1Q969V5 352 aa15.42■□□□□ 0.06
LDLR-204ENST00000545707 RDH12Q96NR8 316 aa15.42■□□□□ 0.06
LDLR-204ENST00000545707 CPPED1Q9BRF8 314 aaPredicted RBP15.42■□□□□ 0.06
LDLR-204ENST00000545707 NTMT1Q9BV86 223 aa15.42■□□□□ 0.06
LDLR-204ENST00000545707 RIBC2Q9H4K1 309 aa15.42■□□□□ 0.06
LDLR-204ENST00000545707 ARL15Q9NXU5 204 aa15.42■□□□□ 0.06
LDLR-204ENST00000545707 ERVK-18Q9QC07 812 aa15.42■□□□□ 0.06
LDLR-204ENST00000545707 C3orf18Q9UK00 162 aa15.42■□□□□ 0.06
LDLR-204ENST00000545707 CLEC4EQ9ULY5 219 aa15.42■□□□□ 0.06
LDLR-204ENST00000545707 VPS4AQ9UN37 437 aa15.42■□□□□ 0.06
LDLR-204ENST00000545707 MYO1GB0I1T2 1018 aa15.41■□□□□ 0.06
LDLR-204ENST00000545707 BCKDKO14874 412 aa15.41■□□□□ 0.06
LDLR-204ENST00000545707 CBFA2T3O75081 653 aa15.41■□□□□ 0.06
LDLR-204ENST00000545707 CLDN9O95484 217 aa15.41■□□□□ 0.06
LDLR-204ENST00000545707 TRBC1P01850 177 aa15.41■□□□□ 0.06
LDLR-204ENST00000545707 EFNA1P20827 205 aaPredicted RBP15.41■□□□□ 0.06
LDLR-204ENST00000545707 RPS3P23396 243 aaKnown RBP eCLIP15.41■□□□□ 0.061e-7■■□□□ 12
LDLR-204ENST00000545707 RPIAP49247 311 aa15.41■□□□□ 0.06
LDLR-204ENST00000545707 TUFMP49411 452 aaKnown RBP15.41■□□□□ 0.06
LDLR-204ENST00000545707 RAD23AP54725 363 aa15.41■□□□□ 0.06
LDLR-204ENST00000545707 BCL2L1Q07817 233 aa15.41■□□□□ 0.06
LDLR-204ENST00000545707 EGFLAMQ63HQ2 1017 aa15.41■□□□□ 0.06
LDLR-204ENST00000545707 CALHM3Q86XJ0 350 aa15.41■□□□□ 0.06
LDLR-204ENST00000545707 GPR26Q8NDV2 337 aa15.41■□□□□ 0.06
LDLR-204ENST00000545707 ITFG2Q969R8 447 aa15.41■□□□□ 0.06
LDLR-204ENST00000545707 PYURFQ96I23 114 aa15.41■□□□□ 0.06
LDLR-204ENST00000545707 SH3GL1Q99961 368 aa15.41■□□□□ 0.06
LDLR-204ENST00000545707 hCG_2039718K7EN88 272 aa15.41■□□□□ 0.06
LDLR-204ENST00000545707 EPHA2P29317 976 aa15.41■□□□□ 0.06
LDLR-204ENST00000545707 PTPN6P29350 595 aa15.41■□□□□ 0.06
LDLR-204ENST00000545707 SMARCB1Q12824 385 aa15.41■□□□□ 0.06
LDLR-204ENST00000545707 CTF1Q16619 201 aa15.41■□□□□ 0.06
LDLR-204ENST00000545707 SMN1Q16637 294 aaKnown RBP15.41■□□□□ 0.06
LDLR-204ENST00000545707 CYP2A13Q16696 494 aa15.41■□□□□ 0.06
LDLR-204ENST00000545707 LRRC73Q5JTD7 316 aa15.41■□□□□ 0.06
LDLR-204ENST00000545707 OR4F3Q6IEY1 312 aa15.41■□□□□ 0.06
LDLR-204ENST00000545707 ZDHHC21Q8IVQ6 265 aa15.41■□□□□ 0.06
LDLR-204ENST00000545707 PLPP6Q8IY26 295 aa15.41■□□□□ 0.06
LDLR-204ENST00000545707 TMCO5AQ8N6Q1 288 aa15.41■□□□□ 0.06
LDLR-204ENST00000545707 TRUB1Q8WWH5 349 aaKnown RBP15.41■□□□□ 0.06
LDLR-204ENST00000545707 ALG14Q96F25 216 aa15.41■□□□□ 0.06
LDLR-204ENST00000545707 APIPQ96GX9 242 aa15.41■□□□□ 0.06
LDLR-204ENST00000545707 VN1R3Q9BXE9 311 aa15.41■□□□□ 0.06
LDLR-204ENST00000545707 TRPS1Q9UHF7 1281 aa15.41■□□□□ 0.06
LDLR-204ENST00000545707 TET1Q8NFU7 2136 aa15.4■□□□□ 0.06
LDLR-204ENST00000545707 NDUFS2O75306 463 aa15.4■□□□□ 0.06
LDLR-204ENST00000545707 RETP07949 1114 aa15.4■□□□□ 0.06
LDLR-204ENST00000545707 ZNF12P17014 697 aa15.4■□□□□ 0.06
LDLR-204ENST00000545707 HSPA14Q0VDF9 509 aa15.4■□□□□ 0.06
LDLR-204ENST00000545707 SF1Q15637 639 aaKnown RBP15.4■□□□□ 0.06
LDLR-204ENST00000545707 CDKN3Q16667 212 aa15.4■□□□□ 0.06
LDLR-204ENST00000545707 ATG9BQ674R7 924 aa15.4■□□□□ 0.06
LDLR-204ENST00000545707 CCDC81Q6ZN84 652 aa15.4■□□□□ 0.06
LDLR-204ENST00000545707 MCOLN3Q8TDD5 553 aa15.4■□□□□ 0.06
LDLR-204ENST00000545707 C2orf15Q8WU43 125 aaKnown RBP15.4■□□□□ 0.06
LDLR-204ENST00000545707 UBE2FQ969M7 185 aa15.4■□□□□ 0.06
LDLR-204ENST00000545707 PPP1R14BQ96C90 147 aa15.4■□□□□ 0.06
LDLR-204ENST00000545707 MAGED4Q96JG8 741 aa15.4■□□□□ 0.06
LDLR-204ENST00000545707 APOLD1Q96LR9 279 aa15.4■□□□□ 0.06
LDLR-204ENST00000545707 EBPLQ9BY08 206 aa15.4■□□□□ 0.06
LDLR-204ENST00000545707 ALOXE3Q9BYJ1 711 aa15.4■□□□□ 0.06
LDLR-204ENST00000545707 RETREG1Q9H6L5 497 aa15.4■□□□□ 0.06
LDLR-204ENST00000545707 BLOC1S6Q9UL45 172 aa15.4■□□□□ 0.06
LDLR-204ENST00000545707 SH3GLB1Q9Y371 365 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms