RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 CTRCQ99895 268 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 H2AFJQ9BTM1 129 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 NDC1Q9BTX1 674 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 FAM129AQ9BZQ8 928 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 TWSG1Q9GZX9 223 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 PCBD2Q9H0N5 130 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 RAB17Q9H0T7 212 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 CAAP1Q9H8G2 361 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 LHX9Q9NQ69 397 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 SYBUQ9NX95 663 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 ACTR10Q9NZ32 417 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 SLC2A6Q9UGQ3 507 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 TRMT6Q9UJA5 497 aaKnown RBP5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 PCDHGA6Q9Y5G7 932 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 PCDHGA4Q9Y5G9 962 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 PCYT1BQ9Y5K3 369 aaPredicted RBP5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 KIF26BQ2KJY2 2108 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 A0A1W2PNU3 283 aaPredicted RBP5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 CLEC18AA5D8T8 446 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 FAM187AA6NFU0 413 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 OR51F1A6NGY5 319 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 EFCAB8A8MWE9 144 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 GOLGA8MH3BSY2 632 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 BTN3A1O00481 513 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 PEX12O00623 359 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 DNALI1O14645 258 aaPredicted RBP5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 RASGRF2O14827 1237 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 PCDH17O14917 1159 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 SGTAO43765 313 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 SRPX2O60687 465 aaPredicted RBP5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 GPC4O75487 556 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 CREG1O75629 220 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 OR2B3O76000 313 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 DLGAP3O95886 979 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 C8GP07360 202 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 RAB40ALP0C0E4 278 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 EBLN1P0CF75 366 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 LIFP15018 202 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 CD9P21926 228 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 ACADLP28330 430 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 NMBRP28336 390 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 PTPN4P29074 926 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 OAS2P29728 719 aaKnown RBP5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 PDHA2P29803 388 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 CCR7P32248 378 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 HPDP32754 393 aaPredicted RBP5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 RPA3P35244 121 aaPredicted RBP5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 GRK3P35626 688 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 GRIA1P42261 906 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 TERF1P54274 439 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 SLC12A2P55011 1212 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 CSE1LP55060 971 aaKnown RBP5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 AP2B1P63010 937 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 CRADDP78560 199 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 DCDP81605 110 aaKnown RBP5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 SP140Q13342 867 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 LY6DQ14210 128 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 GRM7Q14831 915 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 HIF1AQ16665 826 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 KYNUQ16719 465 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 TYSND1Q2T9J0 566 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 BBS9Q3SYG4 887 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 C4orf17Q53FE4 359 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 THEMIS2Q5TEJ8 643 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 IRAK1BP1Q5VVH5 260 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 IZUMO3Q5VZ72 239 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 NIPAL1Q6NVV3 410 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 CLEC18BQ6UXF7 455 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 UNC5AQ6ZN44 842 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 CENPUQ71F23 418 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 GALNT7Q86SF2 657 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 SYVN1Q86TM6 617 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 RAB43Q86YS6 212 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 KLHL7Q8IXQ5 586 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 MYO1HQ8N1T3 1032 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 ZBTB2Q8N680 514 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 CLEC18CQ8NCF0 446 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 GALNT6Q8NCL4 622 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 OR5AR1Q8NGP9 310 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 OR2L8Q8NGY9 312 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 COG1Q8WTW3 980 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 ATL1Q8WXF7 558 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 JPH3Q8WXH2 748 aaPredicted RBP5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 SMPDL3AQ92484 453 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 STARD8Q92502 1023 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 INPP5DQ92835 1189 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 MR1Q95460 341 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 RERGQ96A58 199 aaPredicted RBP5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 ELMO2Q96JJ3 720 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 CAPZA3Q96KX2 299 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 TRAPPC9Q96Q05 1148 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 PITPNM3Q9BZ71 974 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 SLC25A18Q9H1K4 315 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 ACTR5Q9H9F9 607 aaPredicted RBP5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 SIDT1Q9NXL6 827 aaKnown RBP5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 OGFRQ9NZT2 677 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 ZFATQ9P243 1243 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 ZC3H7BQ9UGR2 993 aaKnown RBP5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 NDOR1Q9UHB4 597 aa5.42□□□□□ -1.54
CLSTN3-215ENST00000544584 CROTQ9UKG9 612 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms