RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 USP8P40818 1118 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 GABRB2P47870 512 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 MEOX1P50221 254 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 ADORA2A-AS1P86434 159 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 GPR18Q14330 331 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 KCNAB1Q14722 419 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 KCNMB1Q16558 191 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 CCDC40Q4G0X9 1142 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 DNTTIP2Q5QJE6 756 aaKnown RBP3.96□□□□□ -1.78
SNHG1-220ENST00000544550 ATL3Q6DD88 541 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 ARMC6Q6NXE6 501 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 Q6ZVL8 140 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 STRADAQ7RTN6 431 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 HSD11B1LQ7Z5J1 315 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 CAMKMTQ7Z624 323 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 TECPR1Q7Z6L1 1165 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 ARHGEF19Q8IW93 802 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 ZZZ3Q8IYH5 903 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 UMODL1-AS1Q8N2C9 162 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 BBS5Q8N3I7 341 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 WDTC1Q8N5D0 677 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 SLC38A9Q8NBW4 561 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 TMEM35BQ8NCS4 154 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 OR2Y1Q8NGV0 311 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 LMO3Q8TAP4 145 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 CA5BP1Q8WTZ4 195 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 NTAN1Q96AB6 310 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 PTERQ96BW5 349 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 C18orf8Q96DM3 657 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 SCRN2Q96FV2 425 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 MAGED4Q96JG8 741 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 CFAP57Q96MR6 1250 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 LMF1Q96S06 567 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 ZNF559Q9BR84 538 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 ABCG8Q9H221 673 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 PDCL3Q9H2J4 239 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 ACTR5Q9H9F9 607 aaPredicted RBP3.96□□□□□ -1.78
SNHG1-220ENST00000544550 PDFQ9HBH1 243 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 ZBTB20Q9HC78 741 aaPredicted RBP3.96□□□□□ -1.78
SNHG1-220ENST00000544550 SLC40A1Q9NP59 571 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 UBE2TQ9NPD8 197 aaPredicted RBP3.96□□□□□ -1.78
SNHG1-220ENST00000544550 KLC4Q9NSK0 619 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 RMND1Q9NWS8 449 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 P4HTMQ9NXG6 502 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 STMN3Q9NZ72 180 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 DTLQ9NZJ0 730 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 COQ3Q9NZJ6 369 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 ABI3Q9P2A4 366 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 KCNN3Q9UGI6 736 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 SH3BGRL2Q9UJC5 107 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 TRHDEQ9UKU6 1024 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 PCDHA7Q9UN72 937 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 NEU3Q9UQ49 428 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 SPEF1Q9Y4P9 236 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 CSAG2Q9Y5P2 127 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 DOCK9Q9BZ29 2069 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 AKAP9Q99996 3911 aa3.96□□□□□ -1.78
SNHG1-220ENST00000544550 APCP25054 2843 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 CRYBG3Q68DQ2 2970 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 DYTNA2CJ06 578 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 ZNF503-AS2A6NEH8 195 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 OR5K3A6NET4 321 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 NPIPB15A6NHN6 443 aaPredicted RBP3.95□□□□□ -1.78
SNHG1-220ENST00000544550 E7EQ34 232 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 FAM72CH0Y354 149 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 J3KR12 359 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 KMOO15229 486 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 SLC19A2O60779 497 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 KLF7O75840 302 aaPredicted RBP3.95□□□□□ -1.78
SNHG1-220ENST00000544550 ZWINTO95229 277 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 RASAL1O95294 804 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 CAPN1P07384 714 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 VCLP18206 1134 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 IDSP22304 550 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 DNASE1P24855 282 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 CD40P25942 277 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 SDC4P31431 198 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 HALP42357 657 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 RGRP47804 291 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 AIF1P55008 147 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 BPIFB4P59827 614 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 ARG2P78540 354 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 DBPQ10586 325 aaPredicted RBP3.95□□□□□ -1.78
SNHG1-220ENST00000544550 MFAP5Q13361 173 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 CUL4AQ13619 759 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 CDO1Q16878 200 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 INSCQ1MX18 579 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 COBLL1Q53SF7 1204 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 ARMC12Q5T9G4 340 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 FAM72AQ5TYM5 149 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 AGAP9Q5VTM2 703 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 LRRC66Q68CR7 880 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 LCN10Q6JVE6 187 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 FAM72DQ6L9T8 149 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 ABRAXAS1Q6UWZ7 409 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 ISLR2Q6UXK2 745 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 CLEC9AQ6UXN8 241 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 WASH2PQ6VEQ5 465 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 B4GALNT4Q76KP1 1039 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 SLFN11Q7Z7L1 901 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms