RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 ZNF81P51508 661 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 MRPS21P82921 87 aaKnown RBP3.55□□□□□ -1.84
SCFD1-207ENST00000544052 RELQ04864 619 aaPredicted RBP3.55□□□□□ -1.84
SCFD1-207ENST00000544052 YWHAHQ04917 246 aaPredicted RBP3.55□□□□□ -1.84
SCFD1-207ENST00000544052 PTK6Q13882 451 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 HLFQ16534 295 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 QSER1Q2KHR3 1735 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 TMEM35AQ53FP2 167 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 NHSL2Q5HYW2 709 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 GRTP1Q5TC63 336 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 DPY19L2P1Q6NXN4 242 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 OTOAQ7RTW8 1153 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 DGLUCYQ7Z3D6 616 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 TMPRSS11BQ86T26 416 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 TLK2Q86UE8 772 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 NUP93Q8N1F7 819 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 CORO2AQ92828 525 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 MTERF3Q96E29 417 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 LRRC3BQ96PB8 259 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 FEVQ99581 238 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 SEPHS2Q99611 448 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 C2orf40Q9H1Z8 148 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 LRRC4Q9HBW1 653 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 TRPC7Q9HCX4 862 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 TCP11L1Q9NUJ3 509 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 DDX43Q9NXZ2 648 aaKnown RBP3.55□□□□□ -1.84
SCFD1-207ENST00000544052 ZNF224Q9NZL3 707 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 SPIN1Q9Y657 262 aaPredicted RBP3.55□□□□□ -1.84
SCFD1-207ENST00000544052 LY75O60449 1722 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 TOGARAM1Q9Y4F4 1720 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 CRB1P82279 1406 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 A0A0G2JPF8 293 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 TEX13DA0A0J9YY54 714 aaPredicted RBP3.55□□□□□ -1.84
SCFD1-207ENST00000544052 A0A1W2PPQ1 181 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 LILRA5A6NI73 299 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 CD8B2A6NJW9 211 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 HNRNPCL3B7ZW38 293 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 DNM1LO00429 736 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 EIF3DO15371 548 aaKnown RBP eCLIP3.55□□□□□ -1.84
SCFD1-207ENST00000544052 PMS2P2O95744 297 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 PRSS2P07478 247 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 ACAA1P09110 424 aaPredicted RBP3.55□□□□□ -1.84
SCFD1-207ENST00000544052 SMIM18P0DKX4 95 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 HNRNPCL4P0DMR1 293 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 GNL1P36915 607 aaPredicted RBP3.55□□□□□ -1.84
SCFD1-207ENST00000544052 PGGT1BP53609 377 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 MAPK12P53778 367 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 UBASH3AP57075 661 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 TUBB4BP68371 445 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 C17orf67Q0P5P2 114 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 PPP2R5CQ13362 524 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 ZNF234Q14588 700 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 TWIST1Q15672 202 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 SLC10A5Q5PT55 438 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 FAM109BQ6ICB4 259 aaPredicted RBP3.55□□□□□ -1.84
SCFD1-207ENST00000544052 OR7E24Q6IFN5 339 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 SPATA21Q7Z572 469 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 PAPD5Q8NDF8 572 aaKnown RBP3.55□□□□□ -1.84
SCFD1-207ENST00000544052 OCC1Q8TAD7 63 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 MIB2Q96AX9 1013 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 STAMBPL1Q96FJ0 436 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 RMDN2Q96LZ7 410 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 LMF2Q9BU23 707 aaKnown RBP3.55□□□□□ -1.84
SCFD1-207ENST00000544052 Q9N2K0 584 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 SMARCAL1Q9NZC9 954 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 POLLQ9UGP5 575 aa3.55□□□□□ -1.84
SCFD1-207ENST00000544052 ANKRD26Q9UPS8 1709 aa3.54□□□□□ -1.84
SCFD1-207ENST00000544052 TAF1LQ8IZX4 1826 aa3.54□□□□□ -1.84
SCFD1-207ENST00000544052 ABCC6O95255 1503 aa3.54□□□□□ -1.84
SCFD1-207ENST00000544052 ZCWPW2A0A1B0GU75 182 aa3.54□□□□□ -1.84
SCFD1-207ENST00000544052 ELOVL7A1L3X0 281 aa3.54□□□□□ -1.84
SCFD1-207ENST00000544052 HTR3EA5X5Y0 456 aa3.54□□□□□ -1.84
SCFD1-207ENST00000544052 PSMA7O14818 248 aa3.54□□□□□ -1.84
SCFD1-207ENST00000544052 ZNHIT1O43257 154 aa3.54□□□□□ -1.84
SCFD1-207ENST00000544052 AP5Z1O43299 807 aa3.54□□□□□ -1.84
SCFD1-207ENST00000544052 LIPFP07098 398 aa3.54□□□□□ -1.84
SCFD1-207ENST00000544052 FAM106CPP0CH98 169 aa3.54□□□□□ -1.84
SCFD1-207ENST00000544052 ADRA2CP18825 462 aa3.54□□□□□ -1.84
SCFD1-207ENST00000544052 CD22P20273 847 aa3.54□□□□□ -1.84
SCFD1-207ENST00000544052 CBLP22681 906 aa3.54□□□□□ -1.84
SCFD1-207ENST00000544052 ATP5DP30049 168 aa3.54□□□□□ -1.84
SCFD1-207ENST00000544052 CDC25AP30304 524 aa3.54□□□□□ -1.84
SCFD1-207ENST00000544052 LIMK1P53667 647 aa3.54□□□□□ -1.84
SCFD1-207ENST00000544052 SCN1BQ07699 218 aa3.54□□□□□ -1.84
SCFD1-207ENST00000544052 DLG1Q12959 904 aa3.54□□□□□ -1.84
SCFD1-207ENST00000544052 SLMAPQ14BN4 828 aa3.54□□□□□ -1.84
SCFD1-207ENST00000544052 LBHQ53QV2 105 aaPredicted RBP3.54□□□□□ -1.84
SCFD1-207ENST00000544052 MFSD12Q6NUT3 480 aa3.54□□□□□ -1.84
SCFD1-207ENST00000544052 KLC3Q6P597 504 aa3.54□□□□□ -1.84
SCFD1-207ENST00000544052 ASB18Q6ZVZ8 466 aa3.54□□□□□ -1.84
SCFD1-207ENST00000544052 CCDC91Q7Z6B0 441 aa3.54□□□□□ -1.84
SCFD1-207ENST00000544052 PTOV1Q86YD1 416 aa3.54□□□□□ -1.84
SCFD1-207ENST00000544052 MAML2Q8IZL2 1156 aaPredicted RBP3.54□□□□□ -1.84
SCFD1-207ENST00000544052 CRYBG2Q8N1P7 616 aa3.54□□□□□ -1.84
SCFD1-207ENST00000544052 ARHGAP24Q8N264 748 aa3.54□□□□□ -1.84
SCFD1-207ENST00000544052 RBMXL3Q8N7X1 1067 aaKnown RBP3.54□□□□□ -1.84
SCFD1-207ENST00000544052 SYN2Q92777 582 aaPredicted RBP3.54□□□□□ -1.84
SCFD1-207ENST00000544052 ST6GALNAC6Q969X2 333 aa3.54□□□□□ -1.84
SCFD1-207ENST00000544052 WNT16Q9UBV4 365 aa3.54□□□□□ -1.84
SCFD1-207ENST00000544052 CPSF3Q9UKF6 684 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms