RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 PRKAA2P54646 552 aa11.54□□□□□ -0.56
DDB1-223ENST00000543658 SETDB1Q15047 1291 aa11.54□□□□□ -0.56
DDB1-223ENST00000543658 CCSMST1Q4G0I0 132 aa11.54□□□□□ -0.56
DDB1-223ENST00000543658 CFAP157Q5JU67 520 aa11.54□□□□□ -0.56
DDB1-223ENST00000543658 LIPMQ5VYY2 423 aa11.54□□□□□ -0.56
DDB1-223ENST00000543658 CAPN13Q6MZZ7 669 aaPredicted RBP11.54□□□□□ -0.56
DDB1-223ENST00000543658 AGTRAPQ6RW13 159 aa11.54□□□□□ -0.56
DDB1-223ENST00000543658 AMIGO1Q86WK6 493 aa11.54□□□□□ -0.56
DDB1-223ENST00000543658 NUDCD3Q8IVD9 361 aa11.54□□□□□ -0.56
DDB1-223ENST00000543658 NAXDQ8IW45 347 aa11.54□□□□□ -0.56
DDB1-223ENST00000543658 TRIM42Q8IWZ5 723 aa11.54□□□□□ -0.56
DDB1-223ENST00000543658 FAM181AQ8N9Y4 354 aa11.54□□□□□ -0.56
DDB1-223ENST00000543658 OR10G6Q8NH81 332 aa11.54□□□□□ -0.56
DDB1-223ENST00000543658 RHBDD1Q8TEB9 315 aa11.54□□□□□ -0.56
DDB1-223ENST00000543658 DLG3Q92796 817 aa11.54□□□□□ -0.56
DDB1-223ENST00000543658 RHBDF1Q96CC6 855 aa11.54□□□□□ -0.56
DDB1-223ENST00000543658 CNDP2Q96KP4 475 aaKnown RBP11.54□□□□□ -0.56
DDB1-223ENST00000543658 ATG10Q9H0Y0 220 aa11.54□□□□□ -0.56
DDB1-223ENST00000543658 UCK1Q9HA47 277 aa11.54□□□□□ -0.56
DDB1-223ENST00000543658 CCDC177Q9NQR7 707 aaPredicted RBP11.54□□□□□ -0.56
DDB1-223ENST00000543658 INTS9Q9NV88 658 aaKnown RBP11.54□□□□□ -0.56
DDB1-223ENST00000543658 KCNK4Q9NYG8 393 aa11.54□□□□□ -0.56
DDB1-223ENST00000543658 OPTCQ9UBM4 332 aa11.54□□□□□ -0.56
DDB1-223ENST00000543658 MUC6Q6W4X9 2439 aa11.53□□□□□ -0.56
DDB1-223ENST00000543658 PRAMEF33A0A0G2JMD5 474 aa11.53□□□□□ -0.56
DDB1-223ENST00000543658 GSAPA4D1B5 854 aa11.53□□□□□ -0.56
DDB1-223ENST00000543658 WDR91A4D1P6 747 aa11.53□□□□□ -0.56
DDB1-223ENST00000543658 C4orf47A7E2U8 309 aa11.53□□□□□ -0.56
DDB1-223ENST00000543658 STX16-NPEPL1H3BU86 382 aa11.53□□□□□ -0.56
DDB1-223ENST00000543658 TRIM38O00635 465 aa11.53□□□□□ -0.56
DDB1-223ENST00000543658 CDX4O14627 284 aaPredicted RBP11.53□□□□□ -0.56
DDB1-223ENST00000543658 STX16O14662 325 aa11.53□□□□□ -0.56
DDB1-223ENST00000543658 GIPC1O14908 333 aa11.53□□□□□ -0.56
DDB1-223ENST00000543658 DLX3O60479 287 aa11.53□□□□□ -0.56
DDB1-223ENST00000543658 STK16O75716 305 aa11.53□□□□□ -0.56
DDB1-223ENST00000543658 WDR47O94967 919 aa11.53□□□□□ -0.56
DDB1-223ENST00000543658 CCNDBP1O95273 360 aa11.53□□□□□ -0.56
DDB1-223ENST00000543658 GIMD1P0DJR0 217 aa11.53□□□□□ -0.56
DDB1-223ENST00000543658 CHN1P15882 459 aa11.53□□□□□ -0.56
DDB1-223ENST00000543658 EEF1DP29692 281 aaKnown RBP11.53□□□□□ -0.56
DDB1-223ENST00000543658 ARL1P40616 181 aaPredicted RBP11.53□□□□□ -0.56
DDB1-223ENST00000543658 ETV4P43268 484 aa11.53□□□□□ -0.56
DDB1-223ENST00000543658 PIK3CGP48736 1102 aa11.53□□□□□ -0.56
DDB1-223ENST00000543658 HSPA7P48741 367 aa11.53□□□□□ -0.56
DDB1-223ENST00000543658 EPHA4P54764 986 aa11.53□□□□□ -0.56
DDB1-223ENST00000543658 NAA20P61599 178 aa11.53□□□□□ -0.56
DDB1-223ENST00000543658 NFKB2Q00653 900 aa11.53□□□□□ -0.56
DDB1-223ENST00000543658 PCLAFQ15004 111 aa11.53□□□□□ -0.56
DDB1-223ENST00000543658 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.53□□□□□ -0.56
DDB1-223ENST00000543658 LRRC70Q7Z2Q7 622 aa11.53□□□□□ -0.56
DDB1-223ENST00000543658 C17orf82Q86X59 251 aaPredicted RBP11.53□□□□□ -0.56
DDB1-223ENST00000543658 ZNF761Q86XN6 746 aaPredicted RBP11.53□□□□□ -0.56
DDB1-223ENST00000543658 RASGRP3Q8IV61 690 aa11.53□□□□□ -0.56
DDB1-223ENST00000543658 C10orf107Q8IVU9 208 aa11.53□□□□□ -0.56
DDB1-223ENST00000543658 SFTPA2Q8IWL1 248 aa11.53□□□□□ -0.56
DDB1-223ENST00000543658 SNX31Q8N9S9 440 aa11.53□□□□□ -0.56
DDB1-223ENST00000543658 PPFIBP2Q8ND30 876 aa11.53□□□□□ -0.56
DDB1-223ENST00000543658 OR4E2Q8NGC2 313 aa11.53□□□□□ -0.56
DDB1-223ENST00000543658 OR2L8Q8NGY9 312 aa11.53□□□□□ -0.56
DDB1-223ENST00000543658 JPH3Q8WXH2 748 aaPredicted RBP11.53□□□□□ -0.56
DDB1-223ENST00000543658 SMPDL3AQ92484 453 aa11.53□□□□□ -0.56
DDB1-223ENST00000543658 SLC22A18Q96BI1 424 aa11.53□□□□□ -0.56
DDB1-223ENST00000543658 IL17FQ96PD4 163 aa11.53□□□□□ -0.56
DDB1-223ENST00000543658 EPB41L1Q9H4G0 881 aa11.53□□□□□ -0.56
DDB1-223ENST00000543658 XKR8Q9H6D3 395 aa11.53□□□□□ -0.56
DDB1-223ENST00000543658 SYNDIG1Q9H7V2 258 aa11.53□□□□□ -0.56
DDB1-223ENST00000543658 OR6C2Q9NZP2 312 aa11.53□□□□□ -0.56
DDB1-223ENST00000543658 ICKQ9UPZ9 632 aa11.53□□□□□ -0.56
DDB1-223ENST00000543658 DYRK1BQ9Y463 629 aa11.53□□□□□ -0.56
DDB1-223ENST00000543658 RNF215Q9Y6U7 377 aa11.53□□□□□ -0.56
DDB1-223ENST00000543658 ASCC3Q8N3C0 2202 aaKnown RBP11.53□□□□□ -0.56
DDB1-223ENST00000543658 SNRNP200O75643 2136 aaKnown RBP11.53□□□□□ -0.56
DDB1-223ENST00000543658 PIPSLA2A3N6 862 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 KRT87PA6NCN2 255 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 OR6C74A6NCV1 312 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 C2orf74A8MZ97 194 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 ISM1B1AKI9 464 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 TARM1B6A8C7 271 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 G3V2L1 256 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 MATN2O00339 956 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 PPM1DO15297 605 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 BIRC5O15392 142 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 DUX1O43812 170 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 KLK8O60259 260 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 TRIM13O60858 407 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 SUPT7LO94864 414 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 UBXN7O94888 489 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 BPGMP07738 259 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 SBK3P0C264 359 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 MTHFD2P13995 350 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 PNLIPP16233 465 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 ALDH4A1P30038 563 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 ALDH3A1P30838 453 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 GPR3P46089 330 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 KCNC1P48547 511 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 TBPL1P62380 186 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 HERVK_113P63132 956 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 NAE1Q13564 534 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 FBXO48Q5FWF7 155 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 STPG1Q5TH74 334 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms