RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	OR6C2	Q9NZP2	312 aa		9.85	□□□□□ -0.83
CPSF7-221	ENST00000543545	TMEM216	Q9P0N5	145 aa		9.85	□□□□□ -0.83
CPSF7-221	ENST00000543545	SPATA7	Q9P0W8	599 aa		9.85	□□□□□ -0.83
CPSF7-221	ENST00000543545	XPR1	Q9UBH6	696 aa		9.85	□□□□□ -0.83
CPSF7-221	ENST00000543545	ICK	Q9UPZ9	632 aa		9.85	□□□□□ -0.83
CPSF7-221	ENST00000543545	ZNF106	Q9H2Y7	1883 aa	Known RBP	9.85	□□□□□ -0.83
CPSF7-221	ENST00000543545	FAM186A	A6NE01	2351 aa		9.85	□□□□□ -0.83
CPSF7-221	ENST00000543545	IGHV1OR21-1	A0A087WYE8	117 aa		9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	CCDC189	A1A4V9	331 aa		9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	PIPSL	A2A3N6	862 aa		9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	BTN3A3	O00478	584 aa		9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	GP1BA	P07359	652 aa		9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	CHRM5	P08912	532 aa	Predicted RBP	9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	CREB1	P16220	341 aa		9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	CD1C	P29017	333 aa		9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	RPA3	P35244	121 aa	Predicted RBP	9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	ACADVL	P49748	655 aa		9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	ILK	Q13418	452 aa		9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	FASTK	Q14296	549 aa	Known RBP	9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	GRB7	Q14451	532 aa		9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	ARHGAP19	Q14CB8	494 aa		9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	TGFBI	Q15582	683 aa		9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	CYP2A13	Q16696	494 aa		9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	PPP1R3A	Q16821	1122 aa		9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	CCDC153	Q494R4	210 aa		9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	HSP90B2P	Q58FF3	399 aa		9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	TECRL	Q5HYJ1	363 aa		9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	SNAP47	Q5SQN1	464 aa		9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	AGBL2	Q5U5Z8	902 aa		9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	SULT1C3	Q6IMI6	304 aa		9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	AGTRAP	Q6RW13	159 aa		9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	CDHR3	Q6ZTQ4	885 aa		9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	RAB44	Q7Z6P3	723 aa	Predicted RBP	9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	RASGRP3	Q8IV61	690 aa		9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	FBXO39	Q8N4B4	442 aa		9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	BANP	Q8N9N5	519 aa		9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	PPFIBP2	Q8ND30	876 aa		9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	OR2L8	Q8NGY9	312 aa		9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	DENND1A	Q8TEH3	1009 aa		9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	ZNF480	Q8WV37	535 aa		9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	RSC1A1	Q92681	617 aa		9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	FBXL8	Q96CD0	374 aa		9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	ZDHHC12	Q96GR4	267 aa		9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	APOPT1	Q96IL0	206 aa		9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	TGM7	Q96PF1	710 aa		9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	GFM1	Q96RP9	751 aa	Known RBP	9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	ATOH8	Q96SQ7	321 aa		9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	RTKN	Q9BST9	563 aa		9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	RDH14	Q9HBH5	336 aa		9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	NUDT4	Q9NZJ9	180 aa		9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	STOX2	Q9P2F5	926 aa	Predicted RBP	9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	KLHL3	Q9UH77	587 aa		9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	APOBEC2	Q9Y235	224 aa	Known RBP	9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	DMD	P11532	3685 aa		9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	PLXNB3	Q9ULL4	1909 aa		9.84	□□□□□ -0.83
CPSF7-221	ENST00000543545	TDRD6	O60522	2096 aa	Known RBP	9.83	□□□□□ -0.84
CPSF7-221	ENST00000543545	DCDC2B	A2VCK2	349 aa		9.83	□□□□□ -0.84
CPSF7-221	ENST00000543545	FAM221B	A6H8Z2	402 aa		9.83	□□□□□ -0.84
CPSF7-221	ENST00000543545	OR5K3	A6NET4	321 aa		9.83	□□□□□ -0.84
CPSF7-221	ENST00000543545		A8MU76	341 aa		9.83	□□□□□ -0.84
CPSF7-221	ENST00000543545	C2orf74	A8MZ97	194 aa		9.83	□□□□□ -0.84
CPSF7-221	ENST00000543545	TK2	O00142	265 aa		9.83	□□□□□ -0.84
CPSF7-221	ENST00000543545	GIPC1	O14908	333 aa		9.83	□□□□□ -0.84
CPSF7-221	ENST00000543545	CAPN5	O15484	640 aa	Predicted RBP	9.83	□□□□□ -0.84
CPSF7-221	ENST00000543545	ATP8B1	O43520	1251 aa		9.83	□□□□□ -0.84
CPSF7-221	ENST00000543545	CPNE6	O95741	557 aa		9.83	□□□□□ -0.84
CPSF7-221	ENST00000543545	CEACAM1	P13688	526 aa		9.83	□□□□□ -0.84
CPSF7-221	ENST00000543545	MPST	P25325	297 aa		9.83	□□□□□ -0.84
CPSF7-221	ENST00000543545	IMPA1	P29218	277 aa		9.83	□□□□□ -0.84
CPSF7-221	ENST00000543545	OAS2	P29728	719 aa	Known RBP	9.83	□□□□□ -0.84
CPSF7-221	ENST00000543545	CAPZB	P47756	277 aa		9.83	□□□□□ -0.84
CPSF7-221	ENST00000543545	HNMT	P50135	292 aa		9.83	□□□□□ -0.84
CPSF7-221	ENST00000543545	CDKL1	Q00532	357 aa		9.83	□□□□□ -0.84
CPSF7-221	ENST00000543545	GPS2	Q13227	327 aa		9.83	□□□□□ -0.84
CPSF7-221	ENST00000543545	SPIDR	Q14159	915 aa		9.83	□□□□□ -0.84
CPSF7-221	ENST00000543545	KIR2DS3	Q14952	304 aa		9.83	□□□□□ -0.84
CPSF7-221	ENST00000543545	NR1D2	Q14995	579 aa		9.83	□□□□□ -0.84
CPSF7-221	ENST00000543545	SF1	Q15637	639 aa	Known RBP	9.83	□□□□□ -0.84
CPSF7-221	ENST00000543545	PFKFB4	Q16877	469 aa		9.83	□□□□□ -0.84
CPSF7-221	ENST00000543545	C18orf21	Q32NC0	220 aa	Predicted RBP	9.83	□□□□□ -0.84
CPSF7-221	ENST00000543545	FBXO48	Q5FWF7	155 aa		9.83	□□□□□ -0.84
CPSF7-221	ENST00000543545	TNFAIP8L3	Q5GJ75	292 aa		9.83	□□□□□ -0.84
CPSF7-221	ENST00000543545	CAPN13	Q6MZZ7	669 aa	Predicted RBP	9.83	□□□□□ -0.84
CPSF7-221	ENST00000543545	SUSD1	Q6UWL2	747 aa		9.83	□□□□□ -0.84
CPSF7-221	ENST00000543545	GLRX5	Q86SX6	157 aa		9.83	□□□□□ -0.84
CPSF7-221	ENST00000543545	PLXDC1	Q8IUK5	500 aa		9.83	□□□□□ -0.84
CPSF7-221	ENST00000543545	ADGRF3	Q8IZF5	1079 aa		9.83	□□□□□ -0.84
CPSF7-221	ENST00000543545	TCAIM	Q8N3R3	496 aa		9.83	□□□□□ -0.84
CPSF7-221	ENST00000543545	PTGR2	Q8N8N7	351 aa	Predicted RBP	9.83	□□□□□ -0.84
CPSF7-221	ENST00000543545	ANKRD42	Q8N9B4	389 aa		9.83	□□□□□ -0.84
CPSF7-221	ENST00000543545	ARMC2	Q8NEN0	867 aa		9.83	□□□□□ -0.84
CPSF7-221	ENST00000543545	TCP10L	Q8TDR4	215 aa		9.83	□□□□□ -0.84
CPSF7-221	ENST00000543545	SLC22A18	Q96BI1	424 aa		9.83	□□□□□ -0.84
CPSF7-221	ENST00000543545	RHBDF1	Q96CC6	855 aa		9.83	□□□□□ -0.84
CPSF7-221	ENST00000543545	PHF21B	Q96EK2	531 aa		9.83	□□□□□ -0.84
CPSF7-221	ENST00000543545	PKNOX2	Q96KN3	472 aa		9.83	□□□□□ -0.84
CPSF7-221	ENST00000543545	ATP6V1G3	Q96LB4	118 aa		9.83	□□□□□ -0.84
CPSF7-221	ENST00000543545	FAM111A	Q96PZ2	611 aa		9.83	□□□□□ -0.84
CPSF7-221	ENST00000543545	SELENOS	Q9BQE4	189 aa		9.83	□□□□□ -0.84

Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms