RNA–Protein interactions for RNA: ENST00000538367.5

TRA2A-211, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-211ENST00000538367 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.41■□□□□ 0.38
TRA2A-211ENST00000538367 STOML2Q9UJZ1 356 aa17.41■□□□□ 0.38
TRA2A-211ENST00000538367 AGO1Q9UL18 857 aaKnown RBP17.41■□□□□ 0.38
TRA2A-211ENST00000538367 RNF112Q9ULX5 631 aa17.41■□□□□ 0.38
TRA2A-211ENST00000538367 SNTNA6NMZ2 147 aa17.41■□□□□ 0.38
TRA2A-211ENST00000538367 MAFKO60675 156 aa17.41■□□□□ 0.38
TRA2A-211ENST00000538367 TMCC2O75069 709 aa17.41■□□□□ 0.38
TRA2A-211ENST00000538367 PMPCBO75439 489 aa17.41■□□□□ 0.38
TRA2A-211ENST00000538367 C1QBP02746 253 aa17.41■□□□□ 0.38
TRA2A-211ENST00000538367 GJB1P08034 283 aa17.41■□□□□ 0.38
TRA2A-211ENST00000538367 OGNP20774 298 aaKnown RBP17.41■□□□□ 0.38
TRA2A-211ENST00000538367 HOXA9P31269 272 aa17.41■□□□□ 0.38
TRA2A-211ENST00000538367 WNT3AP56704 352 aa17.41■□□□□ 0.38
TRA2A-211ENST00000538367 NKX3-2P78367 333 aa17.41■□□□□ 0.38
TRA2A-211ENST00000538367 TIAL1Q01085 375 aaKnown RBP eCLIP17.41■□□□□ 0.389e-8■□□□□ 11.1
TRA2A-211ENST00000538367 SLAMF1Q13291 335 aa17.41■□□□□ 0.38
TRA2A-211ENST00000538367 SEMA3AQ14563 771 aa17.41■□□□□ 0.38
TRA2A-211ENST00000538367 ARHGAP12Q8IWW6 846 aa17.41■□□□□ 0.38
TRA2A-211ENST00000538367 ZNF675Q8TD23 568 aa17.41■□□□□ 0.38
TRA2A-211ENST00000538367 HRASLS5Q96KN8 279 aa17.41■□□□□ 0.38
TRA2A-211ENST00000538367 NEDD4LQ96PU5 975 aa17.41■□□□□ 0.38
TRA2A-211ENST00000538367 SLC25A51Q9H1U9 297 aa17.41■□□□□ 0.38
TRA2A-211ENST00000538367 OSER1Q9NX31 292 aa17.41■□□□□ 0.38
TRA2A-211ENST00000538367 NUP205Q92621 2012 aa17.4■□□□□ 0.38
TRA2A-211ENST00000538367 LCHNA4D1U4 455 aa17.4■□□□□ 0.38
TRA2A-211ENST00000538367 CCDC182A6NF36 153 aa17.4■□□□□ 0.38
TRA2A-211ENST00000538367 FGF10O15520 208 aaPredicted RBP17.4■□□□□ 0.38
TRA2A-211ENST00000538367 TLL1O43897 1013 aa17.4■□□□□ 0.38
TRA2A-211ENST00000538367 SERPINA1P01009 418 aa17.4■□□□□ 0.38
TRA2A-211ENST00000538367 HLA-DQB2P05538 268 aa17.4■□□□□ 0.38
TRA2A-211ENST00000538367 SLC2A3P11169 496 aa17.4■□□□□ 0.38
TRA2A-211ENST00000538367 ACADMP11310 421 aa17.4■□□□□ 0.38
TRA2A-211ENST00000538367 MYCLP1P12525 358 aaPredicted RBP17.4■□□□□ 0.38
TRA2A-211ENST00000538367 FMO4P31512 558 aa17.4■□□□□ 0.38
TRA2A-211ENST00000538367 PNPLA4P41247 253 aa17.4■□□□□ 0.38
TRA2A-211ENST00000538367 RGS6P49758 472 aa17.4■□□□□ 0.38
TRA2A-211ENST00000538367 SCN1BQ07699 218 aa17.4■□□□□ 0.38
TRA2A-211ENST00000538367 C9orf57Q5W0N0 161 aa17.4■□□□□ 0.38
TRA2A-211ENST00000538367 FAHD1Q6P587 224 aa17.4■□□□□ 0.38
TRA2A-211ENST00000538367 FAM171BQ6P995 826 aa17.4■□□□□ 0.38
TRA2A-211ENST00000538367 CHTF18Q8WVB6 975 aa17.4■□□□□ 0.38
TRA2A-211ENST00000538367 NDRG1Q92597 394 aaKnown RBP17.4■□□□□ 0.38
TRA2A-211ENST00000538367 CELF6Q96J87 481 aaKnown RBP17.4■□□□□ 0.38
TRA2A-211ENST00000538367 ACOX2Q99424 681 aa17.4■□□□□ 0.38
TRA2A-211ENST00000538367 TTLL2Q9BWV7 592 aa17.4■□□□□ 0.38
TRA2A-211ENST00000538367 GTPBP2Q9BX10 602 aaKnown RBP17.4■□□□□ 0.38
TRA2A-211ENST00000538367 KRT84Q9NSB2 600 aa17.4■□□□□ 0.38
TRA2A-211ENST00000538367 C14orf119Q9NWQ9 140 aa17.4■□□□□ 0.38
TRA2A-211ENST00000538367 C1orf109Q9NX04 203 aa17.4■□□□□ 0.38
TRA2A-211ENST00000538367 DDIT4Q9NX09 232 aa17.4■□□□□ 0.38
TRA2A-211ENST00000538367 VNN3Q9NY84 501 aa17.4■□□□□ 0.38
TRA2A-211ENST00000538367 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.4■□□□□ 0.38
TRA2A-211ENST00000538367 PDCD11Q14690 1871 aaKnown RBP17.4■□□□□ 0.38
TRA2A-211ENST00000538367 TRBV5-3A0A0A0MS03 114 aa17.39■□□□□ 0.38
TRA2A-211ENST00000538367 A0A0U1RQS6 177 aa17.39■□□□□ 0.38
TRA2A-211ENST00000538367 A0A1B0GTL3 188 aa17.39■□□□□ 0.38
TRA2A-211ENST00000538367 PPEF2O14830 753 aa17.39■□□□□ 0.38
TRA2A-211ENST00000538367 C22orf31O95567 290 aa17.39■□□□□ 0.38
TRA2A-211ENST00000538367 CYP4B1P13584 511 aa17.39■□□□□ 0.38
TRA2A-211ENST00000538367 HOXC13P31276 330 aa17.39■□□□□ 0.38
TRA2A-211ENST00000538367 DAOAP59103 153 aa17.39■□□□□ 0.38
TRA2A-211ENST00000538367 EFR3AQ14156 821 aa17.39■□□□□ 0.38
TRA2A-211ENST00000538367 MRNIPQ6NTE8 343 aa17.39■□□□□ 0.38
TRA2A-211ENST00000538367 DPY19L3Q6ZPD9 716 aa17.39■□□□□ 0.38
TRA2A-211ENST00000538367 RNF165Q6ZSG1 346 aa17.39■□□□□ 0.38
TRA2A-211ENST00000538367 Q6ZSR9 355 aa17.39■□□□□ 0.38
TRA2A-211ENST00000538367 ENTHD1Q8IYW4 607 aa17.39■□□□□ 0.38
TRA2A-211ENST00000538367 PGBD3Q8N328 593 aa17.39■□□□□ 0.38
TRA2A-211ENST00000538367 RYBPQ8N488 228 aaPredicted RBP17.39■□□□□ 0.38
TRA2A-211ENST00000538367 DNAJC22Q8N4W6 341 aa17.39■□□□□ 0.38
TRA2A-211ENST00000538367 C2orf69Q8N8R5 385 aa17.39■□□□□ 0.38
TRA2A-211ENST00000538367 DNASE1L2Q92874 299 aa17.39■□□□□ 0.38
TRA2A-211ENST00000538367 FATE1Q969F0 183 aa17.39■□□□□ 0.38
TRA2A-211ENST00000538367 ITCHQ96J02 903 aa17.39■□□□□ 0.38
TRA2A-211ENST00000538367 AARSD1Q9BTE6 412 aaKnown RBP17.39■□□□□ 0.38
TRA2A-211ENST00000538367 IL1RAPQ9NPH3 570 aa17.39■□□□□ 0.38
TRA2A-211ENST00000538367 TRMT6Q9UJA5 497 aaKnown RBP17.39■□□□□ 0.38
TRA2A-211ENST00000538367 AUP1Q9Y679 476 aa17.39■□□□□ 0.38
TRA2A-211ENST00000538367 MICAL3Q7RTP6 2002 aa17.39■□□□□ 0.37
TRA2A-211ENST00000538367 CLCA1A8K7I4 914 aa17.39■□□□□ 0.37
TRA2A-211ENST00000538367 A8MV72 311 aaPredicted RBP17.39■□□□□ 0.37
TRA2A-211ENST00000538367 DFFAO00273 331 aa17.39■□□□□ 0.37
TRA2A-211ENST00000538367 PCDHGA12O60330 932 aa17.39■□□□□ 0.37
TRA2A-211ENST00000538367 CELF2O95319 508 aaKnown RBP17.39■□□□□ 0.37
TRA2A-211ENST00000538367 IL6P05231 212 aa17.39■□□□□ 0.37
TRA2A-211ENST00000538367 G6PDP11413 515 aa17.39■□□□□ 0.37
TRA2A-211ENST00000538367 ZNF30P17039 623 aa17.39■□□□□ 0.37
TRA2A-211ENST00000538367 TNFSF8P32971 234 aa17.39■□□□□ 0.37
TRA2A-211ENST00000538367 CTAG1AP78358 180 aa17.39■□□□□ 0.37
TRA2A-211ENST00000538367 MAD2L1Q13257 205 aaPredicted RBP17.39■□□□□ 0.37
TRA2A-211ENST00000538367 FBXO47Q5MNV8 452 aa17.39■□□□□ 0.37
TRA2A-211ENST00000538367 B3GALNT2Q8NCR0 500 aa17.39■□□□□ 0.37
TRA2A-211ENST00000538367 ZNF419Q96HQ0 510 aaPredicted RBP17.39■□□□□ 0.37
TRA2A-211ENST00000538367 TRNT1Q96Q11 434 aaKnown RBP17.39■□□□□ 0.37
TRA2A-211ENST00000538367 WDCPQ9H6R7 721 aa17.39■□□□□ 0.37
TRA2A-211ENST00000538367 ERVK13-1Q9NX77 482 aa17.39■□□□□ 0.37
TRA2A-211ENST00000538367 KIF17Q9P2E2 1029 aa17.39■□□□□ 0.37
TRA2A-211ENST00000538367 EIF3KQ9UBQ5 218 aaKnown RBP17.39■□□□□ 0.37
TRA2A-211ENST00000538367 ZNF225Q9UK10 706 aa17.39■□□□□ 0.37
TRA2A-211ENST00000538367 RABL2BQ9UNT1 228 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms