RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 RAB43Q86YS6 212 aa18.12■□□□□ 0.49
NDUFS3-213ENST00000534716 KRT222Q8N1A0 295 aa18.12■□□□□ 0.49
NDUFS3-213ENST00000534716 EURLQ9NYK6 297 aa18.12■□□□□ 0.49
NDUFS3-213ENST00000534716 KLK4Q9Y5K2 254 aa18.12■□□□□ 0.49
NDUFS3-213ENST00000534716 MRFAP1Q9Y605 127 aa18.12■□□□□ 0.49
NDUFS3-213ENST00000534716 LRRK2Q5S007 2527 aa18.12■□□□□ 0.49
NDUFS3-213ENST00000534716 RASGRF2O14827 1237 aa18.11■□□□□ 0.49
NDUFS3-213ENST00000534716 PRICKLE3O43900 615 aaPredicted RBP18.11■□□□□ 0.49
NDUFS3-213ENST00000534716 ONECUT2O95948 504 aa18.11■□□□□ 0.49
NDUFS3-213ENST00000534716 MAGP20916 626 aa18.11■□□□□ 0.49
NDUFS3-213ENST00000534716 MAGEA6P43360 314 aa18.11■□□□□ 0.49
NDUFS3-213ENST00000534716 KCNJ1P48048 391 aa18.11■□□□□ 0.49
NDUFS3-213ENST00000534716 MLLT10P55197 1068 aa18.11■□□□□ 0.49
NDUFS3-213ENST00000534716 ADARP55265 1226 aaKnown RBP18.11■□□□□ 0.49
NDUFS3-213ENST00000534716 NKAIN1Q4KMZ8 207 aa18.11■□□□□ 0.49
NDUFS3-213ENST00000534716 MRPL14Q6P1L8 145 aaKnown RBP18.11■□□□□ 0.49
NDUFS3-213ENST00000534716 LRRC8AQ8IWT6 810 aa18.11■□□□□ 0.49
NDUFS3-213ENST00000534716 ZNF655Q8N720 491 aaPredicted RBP18.11■□□□□ 0.49
NDUFS3-213ENST00000534716 FDCSPQ8NFU4 85 aa18.11■□□□□ 0.49
NDUFS3-213ENST00000534716 OR2Y1Q8NGV0 311 aa18.11■□□□□ 0.49
NDUFS3-213ENST00000534716 HMGCLL1Q8TB92 370 aa18.11■□□□□ 0.49
NDUFS3-213ENST00000534716 DENND1AQ8TEH3 1009 aa18.11■□□□□ 0.49
NDUFS3-213ENST00000534716 BIRC8Q96P09 236 aa18.11■□□□□ 0.49
NDUFS3-213ENST00000534716 TCF12Q99081 682 aa18.11■□□□□ 0.49
NDUFS3-213ENST00000534716 RAB11FIP5Q9BXF6 653 aa18.11■□□□□ 0.49
NDUFS3-213ENST00000534716 G3BP2Q9UN86 482 aaKnown RBP18.11■□□□□ 0.49
NDUFS3-213ENST00000534716 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.1■□□□□ 0.49
NDUFS3-213ENST00000534716 NDUFS3O75489 264 aa18.1■□□□□ 0.49
NDUFS3-213ENST00000534716 SORBS2O94875 1100 aaKnown RBP18.1■□□□□ 0.49
NDUFS3-213ENST00000534716 C1orf105O95561 183 aa18.1■□□□□ 0.49
NDUFS3-213ENST00000534716 IGHEP01854 428 aa18.1■□□□□ 0.49
NDUFS3-213ENST00000534716 ATP1A4Q13733 1029 aa18.1■□□□□ 0.49
NDUFS3-213ENST00000534716 TYSND1Q2T9J0 566 aa18.1■□□□□ 0.49
NDUFS3-213ENST00000534716 RNF187Q5TA31 235 aaPredicted RBP18.1■□□□□ 0.49
NDUFS3-213ENST00000534716 C1orf189Q5VU69 101 aa18.1■□□□□ 0.49
NDUFS3-213ENST00000534716 MLIPQ5VWP3 458 aa18.1■□□□□ 0.49
NDUFS3-213ENST00000534716 MRNIPQ6NTE8 343 aa18.1■□□□□ 0.49
NDUFS3-213ENST00000534716 TTC23LQ6PF05 361 aa18.1■□□□□ 0.49
NDUFS3-213ENST00000534716 MRGPREQ86SM8 312 aa18.1■□□□□ 0.49
NDUFS3-213ENST00000534716 ATCAYQ86WG3 371 aa18.1■□□□□ 0.49
NDUFS3-213ENST00000534716 MCATQ8IVS2 390 aaKnown RBP18.1■□□□□ 0.49
NDUFS3-213ENST00000534716 PRELID2Q8N945 189 aa18.1■□□□□ 0.49
NDUFS3-213ENST00000534716 LMNTD1Q8N9Z9 388 aa18.1■□□□□ 0.49
NDUFS3-213ENST00000534716 CFAP61Q8NHU2 1237 aa18.1■□□□□ 0.49
NDUFS3-213ENST00000534716 DLG3Q92796 817 aa18.1■□□□□ 0.49
NDUFS3-213ENST00000534716 ZUFSPQ96AP4 578 aa18.1■□□□□ 0.49
NDUFS3-213ENST00000534716 RAD51AP1Q96B01 352 aa18.1■□□□□ 0.49
NDUFS3-213ENST00000534716 NACC2Q96BF6 587 aa18.1■□□□□ 0.49
NDUFS3-213ENST00000534716 MFSD3Q96ES6 412 aa18.1■□□□□ 0.49
NDUFS3-213ENST00000534716 ZNF285Q96NJ3 590 aa18.1■□□□□ 0.49
NDUFS3-213ENST00000534716 SMAD5Q99717 465 aaKnown RBP18.1■□□□□ 0.49
NDUFS3-213ENST00000534716 NDC1Q9BTX1 674 aa18.1■□□□□ 0.49
NDUFS3-213ENST00000534716 NUDT9Q9BW91 350 aa18.1■□□□□ 0.49
NDUFS3-213ENST00000534716 TXLNGQ9NUQ3 528 aa18.1■□□□□ 0.49
NDUFS3-213ENST00000534716 INTS7Q9NVH2 962 aaKnown RBP18.1■□□□□ 0.49
NDUFS3-213ENST00000534716 SYBUQ9NX95 663 aa18.1■□□□□ 0.49
NDUFS3-213ENST00000534716 IFT80Q9P2H3 777 aaPredicted RBP18.1■□□□□ 0.49
NDUFS3-213ENST00000534716 DHCR7Q9UBM7 475 aaKnown RBP18.1■□□□□ 0.49
NDUFS3-213ENST00000534716 GPN3Q9UHW5 284 aaPredicted RBP18.1■□□□□ 0.49
NDUFS3-213ENST00000534716 SOX13Q9UN79 622 aa18.1■□□□□ 0.49
NDUFS3-213ENST00000534716 TARM1B6A8C7 271 aa18.09■□□□□ 0.49
NDUFS3-213ENST00000534716 H3BMM5 538 aa18.09■□□□□ 0.49
NDUFS3-213ENST00000534716 CEP104O60308 925 aa18.09■□□□□ 0.49
NDUFS3-213ENST00000534716 DPM1O60762 260 aa18.09■□□□□ 0.49
NDUFS3-213ENST00000534716 VAPBO95292 243 aa18.09■□□□□ 0.49
NDUFS3-213ENST00000534716 MGAT1P26572 445 aa18.09■□□□□ 0.49
NDUFS3-213ENST00000534716 ATP5DP30049 168 aa18.09■□□□□ 0.49
NDUFS3-213ENST00000534716 CCNFP41002 786 aa18.09■□□□□ 0.49
NDUFS3-213ENST00000534716 ARSFP54793 590 aa18.09■□□□□ 0.49
NDUFS3-213ENST00000534716 GBX1Q14549 363 aa18.09■□□□□ 0.49
NDUFS3-213ENST00000534716 NADK2Q4G0N4 442 aa18.09■□□□□ 0.49
NDUFS3-213ENST00000534716 ZC3H12BQ5HYM0 836 aaKnown RBP18.09■□□□□ 0.49
NDUFS3-213ENST00000534716 CTSL3PQ5NE16 218 aa18.09■□□□□ 0.49
NDUFS3-213ENST00000534716 FCRL6Q6DN72 434 aa18.09■□□□□ 0.49
NDUFS3-213ENST00000534716 OTOAQ7RTW8 1153 aa18.09■□□□□ 0.49
NDUFS3-213ENST00000534716 SDCCAG8Q86SQ7 713 aaPredicted RBP18.09■□□□□ 0.49
NDUFS3-213ENST00000534716 FAM20CQ8IXL6 584 aa18.09■□□□□ 0.49
NDUFS3-213ENST00000534716 GSDMBQ8TAX9 411 aa18.09■□□□□ 0.49
NDUFS3-213ENST00000534716 LPGAT1Q92604 370 aa18.09■□□□□ 0.49
NDUFS3-213ENST00000534716 FER1L6-AS2Q96M78 137 aa18.09■□□□□ 0.49
NDUFS3-213ENST00000534716 IL17FQ96PD4 163 aa18.09■□□□□ 0.49
NDUFS3-213ENST00000534716 C5AR2Q9P296 337 aa18.09■□□□□ 0.49
NDUFS3-213ENST00000534716 NDOR1Q9UHB4 597 aa18.09■□□□□ 0.49
NDUFS3-213ENST00000534716 SLC39A10Q9ULF5 831 aa18.09■□□□□ 0.49
NDUFS3-213ENST00000534716 TCRBV7S3A2A0A539 114 aa18.08■□□□□ 0.48
NDUFS3-213ENST00000534716 FITM1A5D6W6 292 aa18.08■□□□□ 0.48
NDUFS3-213ENST00000534716 TTLL8A6PVC2 850 aa18.08■□□□□ 0.48
NDUFS3-213ENST00000534716 PFDN6O15212 129 aa18.08■□□□□ 0.48
NDUFS3-213ENST00000534716 ZNF185O15231 689 aa18.08■□□□□ 0.48
NDUFS3-213ENST00000534716 MATN4O95460 622 aa18.08■□□□□ 0.48
NDUFS3-213ENST00000534716 FOLR3P41439 243 aa18.08■□□□□ 0.48
NDUFS3-213ENST00000534716 SOX8P57073 446 aa18.08■□□□□ 0.48
NDUFS3-213ENST00000534716 CCZ1BP86790 482 aa18.08■□□□□ 0.48
NDUFS3-213ENST00000534716 CCZ1P86791 482 aaPredicted RBP18.08■□□□□ 0.48
NDUFS3-213ENST00000534716 SRSF1Q07955 248 aaKnown RBP eCLIP18.08■□□□□ 0.48
NDUFS3-213ENST00000534716 KCNJ11Q14654 390 aa18.08■□□□□ 0.48
NDUFS3-213ENST00000534716 TCTE1Q5JU00 501 aa18.08■□□□□ 0.48
NDUFS3-213ENST00000534716 YOD1Q5VVQ6 348 aaPredicted RBP18.08■□□□□ 0.48
NDUFS3-213ENST00000534716 KIAA0930Q6ICG6 404 aaPredicted RBP18.08■□□□□ 0.48
NDUFS3-213ENST00000534716 FIGLAQ6QHK4 219 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms