RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 CNSTQ6PJW8 725 aa29.21■■■□□ 2.27
SSSCA1-207ENST00000533115 KLHL7Q8IXQ5 586 aa29.21■■■□□ 2.27
SSSCA1-207ENST00000533115 ZBTB2Q8N680 514 aa29.21■■■□□ 2.27
SSSCA1-207ENST00000533115 RUFY1Q96T51 708 aa29.21■■■□□ 2.27
SSSCA1-207ENST00000533115 ACTL8Q9H568 366 aa29.21■■■□□ 2.27
SSSCA1-207ENST00000533115 FBXO6Q9NRD1 293 aaPredicted RBP29.21■■■□□ 2.27
SSSCA1-207ENST00000533115 B8ZZF3 427 aa29.2■■■□□ 2.26
SSSCA1-207ENST00000533115 F7P08709 466 aaPredicted RBP29.2■■■□□ 2.26
SSSCA1-207ENST00000533115 PTPN4P29074 926 aa29.2■■■□□ 2.26
SSSCA1-207ENST00000533115 RORAP35398 523 aa29.2■■■□□ 2.26
SSSCA1-207ENST00000533115 SLC1A2P43004 574 aa29.2■■■□□ 2.26
SSSCA1-207ENST00000533115 GABRA4P48169 554 aa29.2■■■□□ 2.26
SSSCA1-207ENST00000533115 RPS15P62841 145 aaKnown RBP29.2■■■□□ 2.26
SSSCA1-207ENST00000533115 IZUMO3Q5VZ72 239 aa29.2■■■□□ 2.26
SSSCA1-207ENST00000533115 SYDE1Q6ZW31 735 aaPredicted RBP29.2■■■□□ 2.26
SSSCA1-207ENST00000533115 GPR135Q8IZ08 494 aa29.2■■■□□ 2.26
SSSCA1-207ENST00000533115 SERBP1Q8NC51 408 aaKnown RBP eCLIP29.2■■■□□ 2.26
SSSCA1-207ENST00000533115 CALML6Q8TD86 181 aa29.2■■■□□ 2.26
SSSCA1-207ENST00000533115 APOBEC4Q8WW27 367 aaKnown RBP29.2■■■□□ 2.26
SSSCA1-207ENST00000533115 RUNDC3BQ96NL0 473 aa29.2■■■□□ 2.26
SSSCA1-207ENST00000533115 CHST8Q9H2A9 424 aa29.2■■■□□ 2.26
SSSCA1-207ENST00000533115 STARD5Q9NSY2 213 aa29.2■■■□□ 2.26
SSSCA1-207ENST00000533115 PCMTD2Q9NV79 361 aa29.2■■■□□ 2.26
SSSCA1-207ENST00000533115 TSR3Q9UJK0 312 aaKnown RBP29.2■■■□□ 2.26
SSSCA1-207ENST00000533115 BAHCC1Q9P281 2608 aa29.2■■■□□ 2.26
SSSCA1-207ENST00000533115 SNRNP200O75643 2136 aaKnown RBP29.19■■■□□ 2.26
SSSCA1-207ENST00000533115 MATN4O95460 622 aa29.19■■■□□ 2.26
SSSCA1-207ENST00000533115 FURINP09958 794 aa29.19■■■□□ 2.26
SSSCA1-207ENST00000533115 PGAM1P18669 254 aa29.19■■■□□ 2.26
SSSCA1-207ENST00000533115 IVDP26440 423 aa29.19■■■□□ 2.26
SSSCA1-207ENST00000533115 KCNAB2Q13303 367 aa29.19■■■□□ 2.26
SSSCA1-207ENST00000533115 DEFB110Q30KQ9 67 aa29.19■■■□□ 2.26
SSSCA1-207ENST00000533115 CCSMST1Q4G0I0 132 aa29.19■■■□□ 2.26
SSSCA1-207ENST00000533115 TAX1BP1Q86VP1 789 aa29.19■■■□□ 2.26
SSSCA1-207ENST00000533115 FAM20CQ8IXL6 584 aa29.19■■■□□ 2.26
SSSCA1-207ENST00000533115 RAB42Q8N4Z0 105 aa29.19■■■□□ 2.26
SSSCA1-207ENST00000533115 MAGEC3Q8TD91 643 aa29.19■■■□□ 2.26
SSSCA1-207ENST00000533115 SLC7A5P2Q9GIP4 190 aa29.19■■■□□ 2.26
SSSCA1-207ENST00000533115 FARSAQ9Y285 508 aaKnown RBP29.19■■■□□ 2.26
SSSCA1-207ENST00000533115 TLN1Q9Y490 2541 aaKnown RBP29.19■■■□□ 2.26
SSSCA1-207ENST00000533115 CDC14CA4D256 554 aa29.18■■■□□ 2.26
SSSCA1-207ENST00000533115 ZNF749O43361 778 aa29.18■■■□□ 2.26
SSSCA1-207ENST00000533115 HCRTR1O43613 425 aa29.18■■■□□ 2.26
SSSCA1-207ENST00000533115 HBQ1P09105 142 aa29.18■■■□□ 2.26
SSSCA1-207ENST00000533115 CLCN7P51798 805 aa29.18■■■□□ 2.26
SSSCA1-207ENST00000533115 DHX9Q08211 1270 aaKnown RBP29.18■■■□□ 2.26
SSSCA1-207ENST00000533115 NFATC3Q12968 1075 aa29.18■■■□□ 2.26
SSSCA1-207ENST00000533115 ACSBG2Q5FVE4 666 aa29.18■■■□□ 2.26
SSSCA1-207ENST00000533115 LCN10Q6JVE6 187 aa29.18■■■□□ 2.26
SSSCA1-207ENST00000533115 DNAJC22Q8N4W6 341 aa29.18■■■□□ 2.26
SSSCA1-207ENST00000533115 FAM117AQ9C073 453 aa29.18■■■□□ 2.26
SSSCA1-207ENST00000533115 CCDC68Q9H2F9 335 aa29.18■■■□□ 2.26
SSSCA1-207ENST00000533115 CAMSAP3Q9P1Y5 1249 aaPredicted RBP29.18■■■□□ 2.26
SSSCA1-207ENST00000533115 TUBD1Q9UJT1 453 aa29.18■■■□□ 2.26
SSSCA1-207ENST00000533115 BSNQ9UPA5 3926 aa29.18■■■□□ 2.26
SSSCA1-207ENST00000533115 GCN1Q92616 2671 aaKnown RBP29.17■■■□□ 2.26
SSSCA1-207ENST00000533115 H3BMH7 237 aa29.17■■■□□ 2.26
SSSCA1-207ENST00000533115 OR2B3O76000 313 aa29.17■■■□□ 2.26
SSSCA1-207ENST00000533115 MAGP20916 626 aa29.17■■■□□ 2.26
SSSCA1-207ENST00000533115 RPS18P62269 152 aaKnown RBP29.17■■■□□ 2.26
SSSCA1-207ENST00000533115 DR1Q01658 176 aa29.17■■■□□ 2.26
SSSCA1-207ENST00000533115 CRYMQ14894 314 aa29.17■■■□□ 2.26
SSSCA1-207ENST00000533115 HSP90AA5PQ58FG0 334 aa29.17■■■□□ 2.26
SSSCA1-207ENST00000533115 ZNF549Q6P9A3 640 aa29.17■■■□□ 2.26
SSSCA1-207ENST00000533115 KCNMB4Q86W47 210 aa29.17■■■□□ 2.26
SSSCA1-207ENST00000533115 SEC14L1Q92503 715 aa29.17■■■□□ 2.26
SSSCA1-207ENST00000533115 EBNA1BP2Q99848 306 aaKnown RBP29.17■■■□□ 2.26
SSSCA1-207ENST00000533115 FAM167BQ9BTA0 163 aa29.17■■■□□ 2.26
SSSCA1-207ENST00000533115 SPRTNQ9H040 489 aaPredicted RBP29.17■■■□□ 2.26
SSSCA1-207ENST00000533115 SLC25A18Q9H1K4 315 aa29.17■■■□□ 2.26
SSSCA1-207ENST00000533115 FBXO5Q9UKT4 447 aa29.17■■■□□ 2.26
SSSCA1-207ENST00000533115 POLHQ9Y253 713 aa29.17■■■□□ 2.26
SSSCA1-207ENST00000533115 KLHL20Q9Y2M5 609 aa29.17■■■□□ 2.26
SSSCA1-207ENST00000533115 PAFAH1B1P43034 410 aa29.16■■■□□ 2.26
SSSCA1-207ENST00000533115 SF1Q15637 639 aaKnown RBP29.16■■■□□ 2.26
SSSCA1-207ENST00000533115 KLHL38Q2WGJ6 581 aa29.16■■■□□ 2.26
SSSCA1-207ENST00000533115 TTLL9Q3SXZ7 439 aa29.16■■■□□ 2.26
SSSCA1-207ENST00000533115 MSS51Q4VC12 460 aa29.16■■■□□ 2.26
SSSCA1-207ENST00000533115 SYVN1Q86TM6 617 aa29.16■■■□□ 2.26
SSSCA1-207ENST00000533115 SYTL1Q8IYJ3 562 aa29.16■■■□□ 2.26
SSSCA1-207ENST00000533115 HMGCLL1Q8TB92 370 aa29.16■■■□□ 2.26
SSSCA1-207ENST00000533115 DENND1AQ8TEH3 1009 aa29.16■■■□□ 2.26
SSSCA1-207ENST00000533115 KCNJ9Q92806 393 aa29.16■■■□□ 2.26
SSSCA1-207ENST00000533115 SLC30A3Q99726 388 aa29.16■■■□□ 2.26
SSSCA1-207ENST00000533115 IARS2Q9NSE4 1012 aaKnown RBP29.16■■■□□ 2.26
SSSCA1-207ENST00000533115 INTS7Q9NVH2 962 aaKnown RBP29.16■■■□□ 2.26
SSSCA1-207ENST00000533115 KLHL42Q9P2K6 505 aa29.16■■■□□ 2.26
SSSCA1-207ENST00000533115 PLCL2Q9UPR0 1127 aa29.16■■■□□ 2.26
SSSCA1-207ENST00000533115 MED16Q9Y2X0 877 aa29.16■■■□□ 2.26
SSSCA1-207ENST00000533115 KCNMB2Q9Y691 235 aa29.16■■■□□ 2.26
SSSCA1-207ENST00000533115 COMMD10Q9Y6G5 202 aa29.16■■■□□ 2.26
SSSCA1-207ENST00000533115 AP1M2Q9Y6Q5 423 aa29.16■■■□□ 2.26
SSSCA1-207ENST00000533115 KRT87PA6NCN2 255 aa29.15■■■□□ 2.26
SSSCA1-207ENST00000533115 CCDC188H7C350 402 aa29.15■■■□□ 2.26
SSSCA1-207ENST00000533115 PRICKLE3O43900 615 aaPredicted RBP29.15■■■□□ 2.26
SSSCA1-207ENST00000533115 BANF1O75531 89 aa29.15■■■□□ 2.26
SSSCA1-207ENST00000533115 TTC4O95801 387 aa29.15■■■□□ 2.26
SSSCA1-207ENST00000533115 RAB40ALP0C0E4 278 aa29.15■■■□□ 2.26
SSSCA1-207ENST00000533115 PLA2G2AP14555 144 aa29.15■■■□□ 2.26
SSSCA1-207ENST00000533115 MPP1Q00013 466 aa29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms