RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 CTDNEP1O95476 244 aa4.69□□□□□ -1.66
CSDE1-212ENST00000529046 FDPSP14324 419 aaKnown RBP4.69□□□□□ -1.66
CSDE1-212ENST00000529046 EPCAMP16422 314 aa4.69□□□□□ -1.66
CSDE1-212ENST00000529046 ZNF12P17014 697 aa4.69□□□□□ -1.66
CSDE1-212ENST00000529046 AOC1P19801 751 aa4.69□□□□□ -1.66
CSDE1-212ENST00000529046 HOXA9P31269 272 aa4.69□□□□□ -1.66
CSDE1-212ENST00000529046 KRTAP10-7P60409 375 aaPredicted RBP4.69□□□□□ -1.66
CSDE1-212ENST00000529046 NIPAL4Q0D2K0 466 aa4.69□□□□□ -1.66
CSDE1-212ENST00000529046 TRAF2Q12933 501 aa4.69□□□□□ -1.66
CSDE1-212ENST00000529046 ITGADQ13349 1161 aa4.69□□□□□ -1.66
CSDE1-212ENST00000529046 DRAP1Q14919 205 aaPredicted RBP4.69□□□□□ -1.66
CSDE1-212ENST00000529046 EMC2Q15006 297 aa4.69□□□□□ -1.66
CSDE1-212ENST00000529046 COL28A1Q2UY09 1125 aa4.69□□□□□ -1.66
CSDE1-212ENST00000529046 SLC45A4Q5BKX6 768 aa4.69□□□□□ -1.66
CSDE1-212ENST00000529046 XKR9Q5GH70 373 aa4.69□□□□□ -1.66
CSDE1-212ENST00000529046 RARS2Q5T160 578 aaKnown RBP4.69□□□□□ -1.66
CSDE1-212ENST00000529046 HAUS3Q68CZ6 603 aa4.69□□□□□ -1.66
CSDE1-212ENST00000529046 SLC27A1Q6PCB7 646 aa4.69□□□□□ -1.66
CSDE1-212ENST00000529046 CPLX4Q7Z7G2 160 aa4.69□□□□□ -1.66
CSDE1-212ENST00000529046 ELP5Q8TE02 316 aa4.69□□□□□ -1.66
CSDE1-212ENST00000529046 ARHGEF2Q92974 986 aaKnown RBP4.69□□□□□ -1.66
CSDE1-212ENST00000529046 TMEM143Q96AN5 459 aa4.69□□□□□ -1.66
CSDE1-212ENST00000529046 SH3GL2Q99962 352 aa4.69□□□□□ -1.66
CSDE1-212ENST00000529046 CHCHD6Q9BRQ6 235 aa4.69□□□□□ -1.66
CSDE1-212ENST00000529046 SLCO5A1Q9H2Y9 848 aa4.69□□□□□ -1.66
CSDE1-212ENST00000529046 FZD8Q9H461 694 aa4.69□□□□□ -1.66
CSDE1-212ENST00000529046 MINDY3Q9H8M7 445 aa4.69□□□□□ -1.66
CSDE1-212ENST00000529046 POLR1BQ9H9Y6 1135 aa4.69□□□□□ -1.66
CSDE1-212ENST00000529046 TUFT1Q9NNX1 390 aa4.69□□□□□ -1.66
CSDE1-212ENST00000529046 XPNPEP1Q9NQW7 623 aa4.69□□□□□ -1.66
CSDE1-212ENST00000529046 DLGAP2Q9P1A6 1054 aa4.69□□□□□ -1.66
CSDE1-212ENST00000529046 LIMA1Q9UHB6 759 aaKnown RBP4.69□□□□□ -1.66
CSDE1-212ENST00000529046 FBXO9Q9UK97 447 aaPredicted RBP4.69□□□□□ -1.66
CSDE1-212ENST00000529046 DUSP12Q9UNI6 340 aa4.69□□□□□ -1.66
CSDE1-212ENST00000529046 KCNJ14Q9UNX9 436 aa4.69□□□□□ -1.66
CSDE1-212ENST00000529046 USP34Q70CQ2 3546 aa4.69□□□□□ -1.66
CSDE1-212ENST00000529046 WDR81Q562E7 1941 aa4.68□□□□□ -1.66
CSDE1-212ENST00000529046 ANHXE9PGG2 379 aa4.68□□□□□ -1.66
CSDE1-212ENST00000529046 TMEM189-UBE2V1I3L0A0 370 aa4.68□□□□□ -1.66
CSDE1-212ENST00000529046 HCRTR2O43614 444 aa4.68□□□□□ -1.66
CSDE1-212ENST00000529046 NEMFO60524 1076 aa4.68□□□□□ -1.66
CSDE1-212ENST00000529046 CSPG5O95196 566 aa4.68□□□□□ -1.66
CSDE1-212ENST00000529046 ACADMP11310 421 aa4.68□□□□□ -1.66
CSDE1-212ENST00000529046 PLA2G2AP14555 144 aa4.68□□□□□ -1.66
CSDE1-212ENST00000529046 ARF4P18085 180 aaPredicted RBP4.68□□□□□ -1.66
CSDE1-212ENST00000529046 GLRA2P23416 452 aa4.68□□□□□ -1.66
CSDE1-212ENST00000529046 RPA1P27694 616 aa4.68□□□□□ -1.66
CSDE1-212ENST00000529046 TNFRSF8P28908 595 aa4.68□□□□□ -1.66
CSDE1-212ENST00000529046 KRT2P35908 639 aa4.68□□□□□ -1.66
CSDE1-212ENST00000529046 PIGAP37287 484 aa4.68□□□□□ -1.66
CSDE1-212ENST00000529046 VCPP55072 806 aaKnown RBP4.68□□□□□ -1.66
CSDE1-212ENST00000529046 MBTD1Q05BQ5 628 aa4.68□□□□□ -1.66
CSDE1-212ENST00000529046 ELAVL2Q12926 359 aaKnown RBP4.68□□□□□ -1.66
CSDE1-212ENST00000529046 PDIA5Q14554 519 aa4.68□□□□□ -1.66
CSDE1-212ENST00000529046 ASIC2Q16515 512 aa4.68□□□□□ -1.66
CSDE1-212ENST00000529046 SETMARQ53H47 684 aaPredicted RBP4.68□□□□□ -1.66
CSDE1-212ENST00000529046 PLA2G4FQ68DD2 849 aa4.68□□□□□ -1.66
CSDE1-212ENST00000529046 MZT2BQ6NZ67 158 aa4.68□□□□□ -1.66
CSDE1-212ENST00000529046 TMEM105Q8N8V8 129 aa4.68□□□□□ -1.66
CSDE1-212ENST00000529046 SGCDQ92629 289 aa4.68□□□□□ -1.66
CSDE1-212ENST00000529046 NEUROG1Q92886 237 aa4.68□□□□□ -1.66
CSDE1-212ENST00000529046 POLR3CQ9BUI4 534 aaPredicted RBP4.68□□□□□ -1.66
CSDE1-212ENST00000529046 NT5C3AQ9H0P0 336 aa4.68□□□□□ -1.66
CSDE1-212ENST00000529046 C2orf40Q9H1Z8 148 aa4.68□□□□□ -1.66
CSDE1-212ENST00000529046 PRMT7Q9NVM4 692 aaPredicted RBP4.68□□□□□ -1.66
CSDE1-212ENST00000529046 MARCH5Q9NX47 278 aa4.68□□□□□ -1.66
CSDE1-212ENST00000529046 EHD2Q9NZN4 543 aa4.68□□□□□ -1.66
CSDE1-212ENST00000529046 ADAM28Q9UKQ2 775 aa4.68□□□□□ -1.66
CSDE1-212ENST00000529046 PHLPP2Q6ZVD8 1323 aa4.68□□□□□ -1.66
CSDE1-212ENST00000529046 KMT2EQ8IZD2 1858 aa4.67□□□□□ -1.66
CSDE1-212ENST00000529046 BTBD18B2RXH4 712 aa4.67□□□□□ -1.66
CSDE1-212ENST00000529046 N4BP1O75113 896 aaKnown RBP4.67□□□□□ -1.66
CSDE1-212ENST00000529046 OR2C1O95371 312 aa4.67□□□□□ -1.66
CSDE1-212ENST00000529046 CH25HO95992 272 aa4.67□□□□□ -1.66
CSDE1-212ENST00000529046 PDGFBP01127 241 aaPredicted RBP4.67□□□□□ -1.66
CSDE1-212ENST00000529046 CYC1P08574 325 aa4.67□□□□□ -1.66
CSDE1-212ENST00000529046 SPARCP09486 303 aa4.67□□□□□ -1.66
CSDE1-212ENST00000529046 IGHV4-30-4P0DP06 118 aa4.67□□□□□ -1.66
CSDE1-212ENST00000529046 CYP11B2P19099 503 aa4.67□□□□□ -1.66
CSDE1-212ENST00000529046 UBA7P41226 1012 aa4.67□□□□□ -1.66
CSDE1-212ENST00000529046 NAMPTP43490 491 aa4.67□□□□□ -1.66
CSDE1-212ENST00000529046 OR1G1P47890 313 aa4.67□□□□□ -1.66
CSDE1-212ENST00000529046 STARD6P59095 220 aa4.67□□□□□ -1.66
CSDE1-212ENST00000529046 CEBPZQ03701 1054 aaKnown RBP4.67□□□□□ -1.66
CSDE1-212ENST00000529046 LTBQ06643 244 aa4.67□□□□□ -1.66
CSDE1-212ENST00000529046 NAB2Q15742 525 aa4.67□□□□□ -1.66
CSDE1-212ENST00000529046 CALCRLQ16602 461 aa4.67□□□□□ -1.66
CSDE1-212ENST00000529046 MAPK6Q16659 721 aa4.67□□□□□ -1.66
CSDE1-212ENST00000529046 MMEL1Q495T6 779 aa4.67□□□□□ -1.66
CSDE1-212ENST00000529046 XKR4Q5GH76 650 aa4.67□□□□□ -1.66
CSDE1-212ENST00000529046 ZNF324BQ6AW86 544 aaPredicted RBP4.67□□□□□ -1.66
CSDE1-212ENST00000529046 METTL2BQ6P1Q9 378 aaKnown RBP4.67□□□□□ -1.66
CSDE1-212ENST00000529046 FUT10Q6P4F1 479 aa4.67□□□□□ -1.66
CSDE1-212ENST00000529046 TSSK4Q6SA08 328 aa4.67□□□□□ -1.66
CSDE1-212ENST00000529046 SARM1Q6SZW1 724 aa4.67□□□□□ -1.66
CSDE1-212ENST00000529046 PQLC2Q6ZP29 291 aa4.67□□□□□ -1.66
CSDE1-212ENST00000529046 TSPAN33Q86UF1 283 aa4.67□□□□□ -1.66
CSDE1-212ENST00000529046 CATSPER3Q86XQ3 398 aa4.67□□□□□ -1.66
CSDE1-212ENST00000529046 SPATA2LQ8IUW3 424 aaPredicted RBP4.67□□□□□ -1.66
CSDE1-212ENST00000529046 CHERPQ8IWX8 916 aaKnown RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms