RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	DHX9	Q08211	1270 aa	Known RBP	11.34	□□□□□ -0.59
PSMC3-205	ENST00000528362	CRTC2	Q53ET0	693 aa	Predicted RBP	11.34	□□□□□ -0.59
PSMC3-205	ENST00000528362	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	11.34	□□□□□ -0.59
PSMC3-205	ENST00000528362	LCN10	Q6JVE6	187 aa		11.34	□□□□□ -0.59
PSMC3-205	ENST00000528362	C16orf46	Q6P387	395 aa		11.34	□□□□□ -0.59
PSMC3-205	ENST00000528362	ZNF517	Q6ZMY9	492 aa	Predicted RBP	11.34	□□□□□ -0.59
PSMC3-205	ENST00000528362	PCGF5	Q86SE9	256 aa		11.34	□□□□□ -0.59
PSMC3-205	ENST00000528362	IGDCC3	Q8IVU1	814 aa		11.34	□□□□□ -0.59
PSMC3-205	ENST00000528362	LMNTD2	Q8IXW0	634 aa		11.34	□□□□□ -0.59
PSMC3-205	ENST00000528362	C17orf53	Q8N3J3	647 aa	Predicted RBP	11.34	□□□□□ -0.59
PSMC3-205	ENST00000528362	PWWP2A	Q96N64	755 aa		11.34	□□□□□ -0.59
PSMC3-205	ENST00000528362	LRFN5	Q96NI6	719 aa		11.34	□□□□□ -0.59
PSMC3-205	ENST00000528362	RUNDC3B	Q96NL0	473 aa		11.34	□□□□□ -0.59
PSMC3-205	ENST00000528362	CATSPER2	Q96P56	530 aa		11.34	□□□□□ -0.59
PSMC3-205	ENST00000528362	EBNA1BP2	Q99848	306 aa	Known RBP	11.34	□□□□□ -0.59
PSMC3-205	ENST00000528362	ARHGAP9	Q9BRR9	750 aa		11.34	□□□□□ -0.59
PSMC3-205	ENST00000528362	WDR83	Q9BRX9	315 aa	Known RBP	11.34	□□□□□ -0.59
PSMC3-205	ENST00000528362	FAM167B	Q9BTA0	163 aa		11.34	□□□□□ -0.59
PSMC3-205	ENST00000528362	RAB11FIP5	Q9BXF6	653 aa		11.34	□□□□□ -0.59
PSMC3-205	ENST00000528362	PLAC1	Q9HBJ0	212 aa		11.34	□□□□□ -0.59
PSMC3-205	ENST00000528362	KCND3	Q9UK17	655 aa		11.34	□□□□□ -0.59
PSMC3-205	ENST00000528362	FBXO5	Q9UKT4	447 aa		11.34	□□□□□ -0.59
PSMC3-205	ENST00000528362	SLC39A10	Q9ULF5	831 aa		11.34	□□□□□ -0.59
PSMC3-205	ENST00000528362	KLHL20	Q9Y2M5	609 aa		11.34	□□□□□ -0.59
PSMC3-205	ENST00000528362	ZNF462	Q96JM2	2506 aa		11.34	□□□□□ -0.59
PSMC3-205	ENST00000528362	ARHGEF33	A8MVX0	844 aa		11.33	□□□□□ -0.6
PSMC3-205	ENST00000528362		E5RI56	91 aa		11.33	□□□□□ -0.6
PSMC3-205	ENST00000528362		E7EQ34	232 aa		11.33	□□□□□ -0.6
PSMC3-205	ENST00000528362	MEN1	O00255	615 aa		11.33	□□□□□ -0.6
PSMC3-205	ENST00000528362	TP73	O15350	636 aa		11.33	□□□□□ -0.6
PSMC3-205	ENST00000528362	TTI1	O43156	1089 aa		11.33	□□□□□ -0.6
PSMC3-205	ENST00000528362	MAP3K7	O43318	606 aa		11.33	□□□□□ -0.6
PSMC3-205	ENST00000528362	PRICKLE3	O43900	615 aa	Predicted RBP	11.33	□□□□□ -0.6
PSMC3-205	ENST00000528362	CREG1	O75629	220 aa		11.33	□□□□□ -0.6
PSMC3-205	ENST00000528362	SEC31A	O94979	1220 aa	Known RBP	11.33	□□□□□ -0.6
PSMC3-205	ENST00000528362	CTSB	P07858	339 aa		11.33	□□□□□ -0.6
PSMC3-205	ENST00000528362	FURIN	P09958	794 aa		11.33	□□□□□ -0.6
PSMC3-205	ENST00000528362	ERVK-10	P10266	1014 aa		11.33	□□□□□ -0.6
PSMC3-205	ENST00000528362	MAG	P20916	626 aa		11.33	□□□□□ -0.6
PSMC3-205	ENST00000528362	CCNF	P41002	786 aa		11.33	□□□□□ -0.6
PSMC3-205	ENST00000528362	MORF4L2	Q15014	288 aa		11.33	□□□□□ -0.6
PSMC3-205	ENST00000528362	DEFB109B	Q30KR1	87 aa		11.33	□□□□□ -0.6
PSMC3-205	ENST00000528362	BBS9	Q3SYG4	887 aa		11.33	□□□□□ -0.6
PSMC3-205	ENST00000528362	HSP90AA5P	Q58FG0	334 aa		11.33	□□□□□ -0.6
PSMC3-205	ENST00000528362	HIBCH	Q6NVY1	386 aa	Predicted RBP	11.33	□□□□□ -0.6
PSMC3-205	ENST00000528362	TTC23L	Q6PF05	361 aa		11.33	□□□□□ -0.6
PSMC3-205	ENST00000528362	KCNMB4	Q86W47	210 aa		11.33	□□□□□ -0.6
PSMC3-205	ENST00000528362	DSEL	Q8IZU8	1212 aa		11.33	□□□□□ -0.6
PSMC3-205	ENST00000528362	DNAJC22	Q8N4W6	341 aa		11.33	□□□□□ -0.6
PSMC3-205	ENST00000528362	CALML6	Q8TD86	181 aa		11.33	□□□□□ -0.6
PSMC3-205	ENST00000528362	KCNJ9	Q92806	393 aa		11.33	□□□□□ -0.6
PSMC3-205	ENST00000528362	MR1	Q95460	341 aa		11.33	□□□□□ -0.6
PSMC3-205	ENST00000528362	RAD51AP1	Q96B01	352 aa		11.33	□□□□□ -0.6
PSMC3-205	ENST00000528362	SLC22A18	Q96BI1	424 aa		11.33	□□□□□ -0.6
PSMC3-205	ENST00000528362	FOPNL	Q96NB1	174 aa		11.33	□□□□□ -0.6
PSMC3-205	ENST00000528362	CHST8	Q9H2A9	424 aa		11.33	□□□□□ -0.6
PSMC3-205	ENST00000528362	ACTL8	Q9H568	366 aa		11.33	□□□□□ -0.6
PSMC3-205	ENST00000528362	ACTR5	Q9H9F9	607 aa	Predicted RBP	11.33	□□□□□ -0.6
PSMC3-205	ENST00000528362	IARS2	Q9NSE4	1012 aa	Known RBP	11.33	□□□□□ -0.6
PSMC3-205	ENST00000528362	PCMTD2	Q9NV79	361 aa		11.33	□□□□□ -0.6
PSMC3-205	ENST00000528362	GEMIN8	Q9NWZ8	242 aa	Known RBP	11.33	□□□□□ -0.6
PSMC3-205	ENST00000528362	RNF14	Q9UBS8	474 aa		11.33	□□□□□ -0.6
PSMC3-205	ENST00000528362	SERTAD3	Q9UJW9	196 aa		11.33	□□□□□ -0.6
PSMC3-205	ENST00000528362	MRFAP1	Q9Y605	127 aa		11.33	□□□□□ -0.6
PSMC3-205	ENST00000528362	ASH1L	Q9NR48	2969 aa	Known RBP	11.32	□□□□□ -0.6
PSMC3-205	ENST00000528362		A0A1W2PPV9	198 aa		11.32	□□□□□ -0.6
PSMC3-205	ENST00000528362	CCDC188	H7C350	402 aa		11.32	□□□□□ -0.6
PSMC3-205	ENST00000528362	ZNF749	O43361	778 aa		11.32	□□□□□ -0.6
PSMC3-205	ENST00000528362	PSIP1	O75475	530 aa	Known RBP	11.32	□□□□□ -0.6
PSMC3-205	ENST00000528362	HAUS5	O94927	633 aa		11.32	□□□□□ -0.6
PSMC3-205	ENST00000528362	TTC4	O95801	387 aa		11.32	□□□□□ -0.6
PSMC3-205	ENST00000528362	PSMB5	P28074	263 aa		11.32	□□□□□ -0.6
PSMC3-205	ENST00000528362	PTPN4	P29074	926 aa		11.32	□□□□□ -0.6
PSMC3-205	ENST00000528362	PAFAH1B1	P43034	410 aa		11.32	□□□□□ -0.6
PSMC3-205	ENST00000528362	ITGA8	P53708	1063 aa		11.32	□□□□□ -0.6
PSMC3-205	ENST00000528362	POLE2	P56282	527 aa		11.32	□□□□□ -0.6
PSMC3-205	ENST00000528362	RPS18	P62269	152 aa	Known RBP	11.32	□□□□□ -0.6
PSMC3-205	ENST00000528362	CUL1	Q13616	776 aa		11.32	□□□□□ -0.6
PSMC3-205	ENST00000528362	ERV3-1	Q14264	604 aa		11.32	□□□□□ -0.6
PSMC3-205	ENST00000528362	KLHL38	Q2WGJ6	581 aa		11.32	□□□□□ -0.6
PSMC3-205	ENST00000528362	PTCHD3	Q3KNS1	767 aa		11.32	□□□□□ -0.6
PSMC3-205	ENST00000528362	TTLL9	Q3SXZ7	439 aa		11.32	□□□□□ -0.6
PSMC3-205	ENST00000528362	SPANXN3	Q5MJ09	141 aa		11.32	□□□□□ -0.6
PSMC3-205	ENST00000528362	FAM198B	Q6UWH4	519 aa		11.32	□□□□□ -0.6
PSMC3-205	ENST00000528362	SYTL1	Q8IYJ3	562 aa		11.32	□□□□□ -0.6
PSMC3-205	ENST00000528362	C2CD4A	Q8NCU7	369 aa	Predicted RBP	11.32	□□□□□ -0.6
PSMC3-205	ENST00000528362	HMGCLL1	Q8TB92	370 aa		11.32	□□□□□ -0.6
PSMC3-205	ENST00000528362	CD200R1	Q8TD46	325 aa		11.32	□□□□□ -0.6
PSMC3-205	ENST00000528362	N4BP2L2	Q92802	583 aa	Predicted RBP	11.32	□□□□□ -0.6
PSMC3-205	ENST00000528362	CLIP3	Q96DZ5	547 aa		11.32	□□□□□ -0.6
PSMC3-205	ENST00000528362	KRT12	Q99456	494 aa		11.32	□□□□□ -0.6
PSMC3-205	ENST00000528362	NAT9	Q9BTE0	207 aa		11.32	□□□□□ -0.6
PSMC3-205	ENST00000528362	GPR87	Q9BY21	358 aa		11.32	□□□□□ -0.6
PSMC3-205	ENST00000528362	TRIM31	Q9BZY9	425 aa		11.32	□□□□□ -0.6
PSMC3-205	ENST00000528362	SPRTN	Q9H040	489 aa	Predicted RBP	11.32	□□□□□ -0.6
PSMC3-205	ENST00000528362	CCDC68	Q9H2F9	335 aa		11.32	□□□□□ -0.6
PSMC3-205	ENST00000528362	STARD5	Q9NSY2	213 aa		11.32	□□□□□ -0.6
PSMC3-205	ENST00000528362	SPATA7	Q9P0W8	599 aa		11.32	□□□□□ -0.6
PSMC3-205	ENST00000528362	KLHL42	Q9P2K6	505 aa		11.32	□□□□□ -0.6
PSMC3-205	ENST00000528362	SLC17A6	Q9P2U8	582 aa		11.32	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms