RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 IGDCC3Q8IVU1 814 aa25.43■■□□□ 1.66
TSPAN4-217ENST00000527644 C2CD4AQ8NCU7 369 aaPredicted RBP25.43■■□□□ 1.66
TSPAN4-217ENST00000527644 LRRC39Q96DD0 335 aa25.43■■□□□ 1.66
TSPAN4-217ENST00000527644 ARHGAP9Q9BRR9 750 aa25.43■■□□□ 1.66
TSPAN4-217ENST00000527644 FAM60AQ9NP50 221 aa25.43■■□□□ 1.66
TSPAN4-217ENST00000527644 PCDHGA6Q9Y5G7 932 aa25.43■■□□□ 1.66
TSPAN4-217ENST00000527644 PIEZO2Q9H5I5 2752 aa25.43■■□□□ 1.66
TSPAN4-217ENST00000527644 EFCAB8A8MWE9 144 aa25.42■■□□□ 1.66
TSPAN4-217ENST00000527644 NDC80O14777 642 aa25.42■■□□□ 1.66
TSPAN4-217ENST00000527644 ERVK-10P10266 1014 aa25.42■■□□□ 1.66
TSPAN4-217ENST00000527644 CYP2A7P20853 494 aa25.42■■□□□ 1.66
TSPAN4-217ENST00000527644 ITGA1P56199 1179 aa25.42■■□□□ 1.66
TSPAN4-217ENST00000527644 ARL4CP56559 192 aa25.42■■□□□ 1.66
TSPAN4-217ENST00000527644 LY6DQ14210 128 aa25.42■■□□□ 1.66
TSPAN4-217ENST00000527644 HIF1AQ16665 826 aa25.42■■□□□ 1.66
TSPAN4-217ENST00000527644 KLHL38Q2WGJ6 581 aa25.42■■□□□ 1.66
TSPAN4-217ENST00000527644 NEK10Q6ZWH5 1172 aa25.42■■□□□ 1.66
TSPAN4-217ENST00000527644 C2orf73Q8N5S3 287 aaPredicted RBP25.42■■□□□ 1.66
TSPAN4-217ENST00000527644 CT55Q8WUE5 264 aa25.42■■□□□ 1.66
TSPAN4-217ENST00000527644 N4BP2L2Q92802 583 aaPredicted RBP25.42■■□□□ 1.66
TSPAN4-217ENST00000527644 TRIM31Q9BZY9 425 aa25.42■■□□□ 1.66
TSPAN4-217ENST00000527644 MED16Q9Y2X0 877 aa25.42■■□□□ 1.66
TSPAN4-217ENST00000527644 KALRNO60229 2985 aa25.42■■□□□ 1.66
TSPAN4-217ENST00000527644 E7EQ34 232 aa25.41■■□□□ 1.66
TSPAN4-217ENST00000527644 PRB1P04280 392 aa25.41■■□□□ 1.66
TSPAN4-217ENST00000527644 KLK3P07288 261 aaPredicted RBP25.41■■□□□ 1.66
TSPAN4-217ENST00000527644 ELK3P41970 407 aa25.41■■□□□ 1.66
TSPAN4-217ENST00000527644 CDC20Q12834 499 aa25.41■■□□□ 1.66
TSPAN4-217ENST00000527644 DNASE1L3Q13609 305 aa25.41■■□□□ 1.66
TSPAN4-217ENST00000527644 CCSMST1Q4G0I0 132 aa25.41■■□□□ 1.66
TSPAN4-217ENST00000527644 PRAMEF17Q5VTA0 474 aa25.41■■□□□ 1.66
TSPAN4-217ENST00000527644 SLC38A9Q8NBW4 561 aa25.41■■□□□ 1.66
TSPAN4-217ENST00000527644 SPATA4Q8NEY3 305 aa25.41■■□□□ 1.66
TSPAN4-217ENST00000527644 HMGCLL1Q8TB92 370 aa25.41■■□□□ 1.66
TSPAN4-217ENST00000527644 INPP5DQ92835 1189 aa25.41■■□□□ 1.66
TSPAN4-217ENST00000527644 PWWP2AQ96N64 755 aa25.41■■□□□ 1.66
TSPAN4-217ENST00000527644 SLC30A3Q99726 388 aa25.41■■□□□ 1.66
TSPAN4-217ENST00000527644 AARSD1Q9BTE6 412 aaKnown RBP25.41■■□□□ 1.66
TSPAN4-217ENST00000527644 GPR87Q9BY21 358 aa25.41■■□□□ 1.66
TSPAN4-217ENST00000527644 AKIRIN1Q9H9L7 192 aaPredicted RBP25.41■■□□□ 1.66
TSPAN4-217ENST00000527644 SPATA7Q9P0W8 599 aa25.41■■□□□ 1.66
TSPAN4-217ENST00000527644 ZC3H7BQ9UGR2 993 aaKnown RBP25.41■■□□□ 1.66
TSPAN4-217ENST00000527644 TSR3Q9UJK0 312 aaKnown RBP25.41■■□□□ 1.66
TSPAN4-217ENST00000527644 DHRS7Q9Y394 339 aa25.41■■□□□ 1.66
TSPAN4-217ENST00000527644 MRPS18BQ9Y676 258 aaKnown RBP25.41■■□□□ 1.66
TSPAN4-217ENST00000527644 SPTBP11277 2137 aa25.4■■□□□ 1.66
TSPAN4-217ENST00000527644 KATNA1O75449 491 aa25.4■■□□□ 1.66
TSPAN4-217ENST00000527644 PSIP1O75475 530 aaKnown RBP25.4■■□□□ 1.66
TSPAN4-217ENST00000527644 FKBP9O95302 570 aa25.4■■□□□ 1.66
TSPAN4-217ENST00000527644 GABRA4P48169 554 aa25.4■■□□□ 1.66
TSPAN4-217ENST00000527644 GPS2Q13227 327 aa25.4■■□□□ 1.66
TSPAN4-217ENST00000527644 BORAQ6PGQ7 559 aa25.4■■□□□ 1.66
TSPAN4-217ENST00000527644 SYT10Q6XYQ8 523 aa25.4■■□□□ 1.66
TSPAN4-217ENST00000527644 ZNF517Q6ZMY9 492 aaPredicted RBP25.4■■□□□ 1.66
TSPAN4-217ENST00000527644 KIAA0408Q6ZU52 694 aa25.4■■□□□ 1.66
TSPAN4-217ENST00000527644 TAX1BP1Q86VP1 789 aa25.4■■□□□ 1.66
TSPAN4-217ENST00000527644 CNTN4Q8IWV2 1026 aa25.4■■□□□ 1.66
TSPAN4-217ENST00000527644 GPR135Q8IZ08 494 aa25.4■■□□□ 1.66
TSPAN4-217ENST00000527644 LMNTD1Q8N9Z9 388 aa25.4■■□□□ 1.66
TSPAN4-217ENST00000527644 BBOF1Q8ND07 529 aa25.4■■□□□ 1.66
TSPAN4-217ENST00000527644 GIMAP7Q8NHV1 300 aa25.4■■□□□ 1.66
TSPAN4-217ENST00000527644 CLIP3Q96DZ5 547 aa25.4■■□□□ 1.66
TSPAN4-217ENST00000527644 CERS2Q96G23 380 aa25.4■■□□□ 1.66
TSPAN4-217ENST00000527644 MED8Q96G25 268 aa25.4■■□□□ 1.66
TSPAN4-217ENST00000527644 ACTR5Q9H9F9 607 aaPredicted RBP25.4■■□□□ 1.66
TSPAN4-217ENST00000527644 FAM114A2Q9NRY5 505 aa25.4■■□□□ 1.66
TSPAN4-217ENST00000527644 INTS7Q9NVH2 962 aaKnown RBP25.4■■□□□ 1.66
TSPAN4-217ENST00000527644 CAMSAP3Q9P1Y5 1249 aaPredicted RBP25.4■■□□□ 1.66
TSPAN4-217ENST00000527644 TEX264Q9Y6I9 313 aa25.4■■□□□ 1.66
TSPAN4-217ENST00000527644 FAM187AA6NFU0 413 aa25.39■■□□□ 1.66
TSPAN4-217ENST00000527644 MEN1O00255 615 aa25.39■■□□□ 1.66
TSPAN4-217ENST00000527644 TP73O15350 636 aa25.39■■□□□ 1.66
TSPAN4-217ENST00000527644 PRICKLE3O43900 615 aaPredicted RBP25.39■■□□□ 1.66
TSPAN4-217ENST00000527644 RECKO95980 971 aa25.39■■□□□ 1.66
TSPAN4-217ENST00000527644 CATP04040 527 aaKnown RBP25.39■■□□□ 1.66
TSPAN4-217ENST00000527644 HBQ1P09105 142 aa25.39■■□□□ 1.66
TSPAN4-217ENST00000527644 PRKAR1AP10644 381 aa25.39■■□□□ 1.66
TSPAN4-217ENST00000527644 ENO3P13929 434 aaPredicted RBP25.39■■□□□ 1.66
TSPAN4-217ENST00000527644 RPL21P46778 160 aaKnown RBP25.39■■□□□ 1.66
TSPAN4-217ENST00000527644 SF1Q15637 639 aaKnown RBP25.39■■□□□ 1.66
TSPAN4-217ENST00000527644 HP1BP3Q5SSJ5 553 aaPredicted RBP25.39■■□□□ 1.66
TSPAN4-217ENST00000527644 FAM199XQ6PEV8 388 aaPredicted RBP25.39■■□□□ 1.66
TSPAN4-217ENST00000527644 MAATS1Q7Z4T9 603 aa25.39■■□□□ 1.66
TSPAN4-217ENST00000527644 FAM20CQ8IXL6 584 aa25.39■■□□□ 1.66
TSPAN4-217ENST00000527644 DSELQ8IZU8 1212 aa25.39■■□□□ 1.66
TSPAN4-217ENST00000527644 DNAJC22Q8N4W6 341 aa25.39■■□□□ 1.66
TSPAN4-217ENST00000527644 EXD3Q8N9H8 876 aa25.39■■□□□ 1.66
TSPAN4-217ENST00000527644 OR9A1PQ8NGU1 263 aa25.39■■□□□ 1.66
TSPAN4-217ENST00000527644 DENND1AQ8TEH3 1009 aa25.39■■□□□ 1.66
TSPAN4-217ENST00000527644 MR1Q95460 341 aa25.39■■□□□ 1.66
TSPAN4-217ENST00000527644 GPR21Q99679 349 aa25.39■■□□□ 1.66
TSPAN4-217ENST00000527644 FAM117AQ9C073 453 aa25.39■■□□□ 1.66
TSPAN4-217ENST00000527644 SLC7A5P2Q9GIP4 190 aa25.39■■□□□ 1.66
TSPAN4-217ENST00000527644 CHMP2BQ9UQN3 213 aa25.39■■□□□ 1.66
TSPAN4-217ENST00000527644 SNX24Q9Y343 169 aa25.39■■□□□ 1.66
TSPAN4-217ENST00000527644 ARHGEF33A8MVX0 844 aa25.38■■□□□ 1.65
TSPAN4-217ENST00000527644 VPS26AO75436 327 aa25.38■■□□□ 1.65
TSPAN4-217ENST00000527644 C1QL1O75973 258 aa25.38■■□□□ 1.65
TSPAN4-217ENST00000527644 MPC1LP0DKB6 136 aa25.38■■□□□ 1.65
TSPAN4-217ENST00000527644 CBSLP0DN79 551 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms