RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	SIPA1L3	O60292	1781 aa	Predicted RBP	4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	SSC5D	A1L4H1	1573 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	IBTK	Q9P2D0	1353 aa	Predicted RBP	4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	TCRBV5S1A1T	A0A578	114 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	CBY3	A6NI87	242 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	MAGEB17	A8MXT2	336 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356		O00370	1275 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	PRDM1	O75626	825 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	UFL1	O94874	794 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	ADCY5	O95622	1261 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	MBP	P02686	304 aa	Predicted RBP	4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	FES	P07332	822 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	OR52Z1	P0C646	297 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	CCL5	P13501	91 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	TYK2	P29597	1187 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	SFN	P31947	248 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	CTNNB1	P35222	781 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	MDH1	P40925	334 aa	Known RBP	4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	MTIF2	P46199	727 aa	Known RBP	4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	ATP5O	P48047	213 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	CD151	P48509	253 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	BLK	P51451	505 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	NAGLU	P54802	743 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	CDH13	P55290	713 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	RAE1	P78406	368 aa	Known RBP	4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	COG7	P83436	770 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	ACSM1	Q08AH1	577 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	CHIT1	Q13231	466 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	DNASE1L3	Q13609	305 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	RPE65	Q16518	533 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	CBWD6	Q4V339	395 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	MDH1B	Q5I0G3	518 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	CBWD3	Q5JTY5	395 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	SFMBT2	Q5VUG0	894 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	KRT39	Q6A163	491 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	SFRP4	Q6FHJ7	346 aa	Predicted RBP	4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	ZYG11A	Q6WRX3	759 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	TMEM182	Q6ZP80	229 aa	Predicted RBP	4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	DPY19L3	Q6ZPD9	716 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	GSTA5	Q7RTV2	222 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	ZNF595	Q8IYB9	648 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	CCDC13	Q8IYE1	715 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	ADGRF3	Q8IZF5	1079 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	CLYBL	Q8N0X4	340 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	KDM8	Q8N371	416 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	ARFGAP1	Q8N6T3	406 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	SCAI	Q8N9R8	606 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	TERB1	Q8NA31	727 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	TSPAN14	Q8NG11	270 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	RP9	Q8TA86	221 aa	Known RBP	4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	SGCD	Q92629	289 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	DNASE1L2	Q92874	299 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	MIB2	Q96AX9	1013 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	CTHRC1	Q96CG8	243 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	C5orf30	Q96GV9	206 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	SNX18	Q96RF0	628 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	WDR83	Q9BRX9	315 aa	Known RBP	4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	KATNB1	Q9BVA0	655 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	C1QTNF5	Q9BXJ0	243 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	MOV10L1	Q9BXT6	1211 aa	Known RBP	4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	NUF2	Q9BZD4	464 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	CCSER1	Q9C0I3	900 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	RWDD1	Q9H446	243 aa	Predicted RBP	4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	COQ10B	Q9H8M1	238 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	NMRK1	Q9NWW6	199 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	NLK	Q9UBE8	527 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	GMEB2	Q9UKD1	530 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	ITGA11	Q9UKX5	1188 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	CFAP45	Q9UL16	551 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	VPS4A	Q9UN37	437 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	TMED5	Q9Y3A6	229 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	SNX9	Q9Y5X1	595 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	NUP98	P52948	1817 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	LAMA2	P24043	3122 aa	Known RBP	4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	ZNF609	O15014	1411 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	SH3TC1	Q8TE82	1336 aa		4.2	□□□□□ -1.74
PCM1-223	ENST00000524356	ZSWIM8	A7E2V4	1837 aa		4.19	□□□□□ -1.74
PCM1-223	ENST00000524356		A0A0G2JPF8	293 aa		4.19	□□□□□ -1.74
PCM1-223	ENST00000524356	HNRNPCL3	B7ZW38	293 aa		4.19	□□□□□ -1.74
PCM1-223	ENST00000524356	TNFRSF13B	O14836	293 aa	Predicted RBP	4.19	□□□□□ -1.74
PCM1-223	ENST00000524356	NEMF	O60524	1076 aa		4.19	□□□□□ -1.74
PCM1-223	ENST00000524356	SLC16A8	O95907	504 aa		4.19	□□□□□ -1.74
PCM1-223	ENST00000524356	TF	P02787	698 aa		4.19	□□□□□ -1.74
PCM1-223	ENST00000524356	HNRNPCL4	P0DMR1	293 aa		4.19	□□□□□ -1.74
PCM1-223	ENST00000524356	CYP11B2	P19099	503 aa		4.19	□□□□□ -1.74
PCM1-223	ENST00000524356	ANXA7	P20073	488 aa	Known RBP	4.19	□□□□□ -1.74
PCM1-223	ENST00000524356	ADRA1D	P25100	572 aa		4.19	□□□□□ -1.74
PCM1-223	ENST00000524356	ACADL	P28330	430 aa		4.19	□□□□□ -1.74
PCM1-223	ENST00000524356	HOXD10	P28358	340 aa		4.19	□□□□□ -1.74
PCM1-223	ENST00000524356	CDKN1A	P38936	164 aa		4.19	□□□□□ -1.74
PCM1-223	ENST00000524356	DHPS	P49366	369 aa	Predicted RBP	4.19	□□□□□ -1.74
PCM1-223	ENST00000524356	DIO1	P49895	249 aa		4.19	□□□□□ -1.74
PCM1-223	ENST00000524356	UCP2	P55851	309 aa		4.19	□□□□□ -1.74
PCM1-223	ENST00000524356	SLC37A1	P57057	533 aa		4.19	□□□□□ -1.74
PCM1-223	ENST00000524356	PTEN	P60484	403 aa		4.19	□□□□□ -1.74
PCM1-223	ENST00000524356	SHC2	P98077	582 aa		4.19	□□□□□ -1.74
PCM1-223	ENST00000524356	MECOM	Q03112	1051 aa		4.19	□□□□□ -1.74
PCM1-223	ENST00000524356	RIPK1	Q13546	671 aa		4.19	□□□□□ -1.74
PCM1-223	ENST00000524356	KARS	Q15046	597 aa	Known RBP	4.19	□□□□□ -1.74
PCM1-223	ENST00000524356	PPP1R7	Q15435	360 aa		4.19	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 62 ms