RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 CCDC188H7C350 402 aa17.24■□□□□ 0.35
TRAPPC9-211ENST00000521700 PRICKLE3O43900 615 aaPredicted RBP17.24■□□□□ 0.35
TRAPPC9-211ENST00000521700 HAUS5O94927 633 aa17.24■□□□□ 0.35
TRAPPC9-211ENST00000521700 MATN4O95460 622 aa17.24■□□□□ 0.35
TRAPPC9-211ENST00000521700 PGAM1P18669 254 aa17.24■□□□□ 0.35
TRAPPC9-211ENST00000521700 ATP5DP30049 168 aa17.24■□□□□ 0.35
TRAPPC9-211ENST00000521700 CLCN7P51798 805 aa17.24■□□□□ 0.35
TRAPPC9-211ENST00000521700 ITGA1P56199 1179 aa17.24■□□□□ 0.35
TRAPPC9-211ENST00000521700 MPP1Q00013 466 aa17.24■□□□□ 0.35
TRAPPC9-211ENST00000521700 CRYMQ14894 314 aa17.24■□□□□ 0.35
TRAPPC9-211ENST00000521700 ZNF517Q6ZMY9 492 aaPredicted RBP17.24■□□□□ 0.35
TRAPPC9-211ENST00000521700 TAX1BP1Q86VP1 789 aa17.24■□□□□ 0.35
TRAPPC9-211ENST00000521700 IGDCC3Q8IVU1 814 aa17.24■□□□□ 0.35
TRAPPC9-211ENST00000521700 CALML6Q8TD86 181 aa17.24■□□□□ 0.35
TRAPPC9-211ENST00000521700 MR1Q95460 341 aa17.24■□□□□ 0.35
TRAPPC9-211ENST00000521700 FOPNLQ96NB1 174 aa17.24■□□□□ 0.35
TRAPPC9-211ENST00000521700 SLC30A3Q99726 388 aa17.24■□□□□ 0.35
TRAPPC9-211ENST00000521700 TRIM51Q9BSJ1 452 aa17.24■□□□□ 0.35
TRAPPC9-211ENST00000521700 IARS2Q9NSE4 1012 aaKnown RBP17.24■□□□□ 0.35
TRAPPC9-211ENST00000521700 RNF14Q9UBS8 474 aa17.24■□□□□ 0.35
TRAPPC9-211ENST00000521700 FBXO5Q9UKT4 447 aa17.24■□□□□ 0.35
TRAPPC9-211ENST00000521700 KLHL20Q9Y2M5 609 aa17.24■□□□□ 0.35
TRAPPC9-211ENST00000521700 MRFAP1Q9Y605 127 aa17.24■□□□□ 0.35
TRAPPC9-211ENST00000521700 H3BMH7 237 aa17.23■□□□□ 0.35
TRAPPC9-211ENST00000521700 MEN1O00255 615 aa17.23■□□□□ 0.35
TRAPPC9-211ENST00000521700 TTI1O43156 1089 aa17.23■□□□□ 0.35
TRAPPC9-211ENST00000521700 CREG1O75629 220 aa17.23■□□□□ 0.35
TRAPPC9-211ENST00000521700 KLK3P07288 261 aaPredicted RBP17.23■□□□□ 0.35
TRAPPC9-211ENST00000521700 FURINP09958 794 aa17.23■□□□□ 0.35
TRAPPC9-211ENST00000521700 ERVK-10P10266 1014 aa17.23■□□□□ 0.35
TRAPPC9-211ENST00000521700 CYP2A7P20853 494 aa17.23■□□□□ 0.35
TRAPPC9-211ENST00000521700 RORAP35398 523 aa17.23■□□□□ 0.35
TRAPPC9-211ENST00000521700 CCNFP41002 786 aa17.23■□□□□ 0.35
TRAPPC9-211ENST00000521700 ERV3-1Q14264 604 aa17.23■□□□□ 0.35
TRAPPC9-211ENST00000521700 MORF4L2Q15014 288 aa17.23■□□□□ 0.35
TRAPPC9-211ENST00000521700 KLHL38Q2WGJ6 581 aa17.23■□□□□ 0.35
TRAPPC9-211ENST00000521700 DEFB110Q30KQ9 67 aa17.23■□□□□ 0.35
TRAPPC9-211ENST00000521700 DEFB109BQ30KR1 87 aa17.23■□□□□ 0.35
TRAPPC9-211ENST00000521700 BBS9Q3SYG4 887 aa17.23■□□□□ 0.35
TRAPPC9-211ENST00000521700 LCN10Q6JVE6 187 aa17.23■□□□□ 0.35
TRAPPC9-211ENST00000521700 KCNMB4Q86W47 210 aa17.23■□□□□ 0.35
TRAPPC9-211ENST00000521700 DSELQ8IZU8 1212 aa17.23■□□□□ 0.35
TRAPPC9-211ENST00000521700 C17orf53Q8N3J3 647 aaPredicted RBP17.23■□□□□ 0.35
TRAPPC9-211ENST00000521700 DNAJC22Q8N4W6 341 aa17.23■□□□□ 0.35
TRAPPC9-211ENST00000521700 GIMAP7Q8NHV1 300 aa17.23■□□□□ 0.35
TRAPPC9-211ENST00000521700 DENND1AQ8TEH3 1009 aa17.23■□□□□ 0.35
TRAPPC9-211ENST00000521700 SLC22A18Q96BI1 424 aa17.23■□□□□ 0.35
TRAPPC9-211ENST00000521700 CLIP3Q96DZ5 547 aa17.23■□□□□ 0.35
TRAPPC9-211ENST00000521700 PWWP2AQ96N64 755 aa17.23■□□□□ 0.35
TRAPPC9-211ENST00000521700 GPR87Q9BY21 358 aa17.23■□□□□ 0.35
TRAPPC9-211ENST00000521700 SPRTNQ9H040 489 aaPredicted RBP17.23■□□□□ 0.35
TRAPPC9-211ENST00000521700 CHST8Q9H2A9 424 aa17.23■□□□□ 0.35
TRAPPC9-211ENST00000521700 ACTR5Q9H9F9 607 aaPredicted RBP17.23■□□□□ 0.35
TRAPPC9-211ENST00000521700 PCMTD2Q9NV79 361 aa17.23■□□□□ 0.35
TRAPPC9-211ENST00000521700 KALRNO60229 2985 aa17.23■□□□□ 0.35
TRAPPC9-211ENST00000521700 COL6A6A6NMZ7 2263 aa17.23■□□□□ 0.35
TRAPPC9-211ENST00000521700 E7EQ34 232 aa17.22■□□□□ 0.35
TRAPPC9-211ENST00000521700 ZNF749O43361 778 aa17.22■□□□□ 0.35
TRAPPC9-211ENST00000521700 TTC4O95801 387 aa17.22■□□□□ 0.35
TRAPPC9-211ENST00000521700 RECKO95980 971 aa17.22■□□□□ 0.35
TRAPPC9-211ENST00000521700 CTSBP07858 339 aa17.22■□□□□ 0.35
TRAPPC9-211ENST00000521700 MAGP20916 626 aa17.22■□□□□ 0.35
TRAPPC9-211ENST00000521700 CCR10P46092 362 aa17.22■□□□□ 0.35
TRAPPC9-211ENST00000521700 SF1Q15637 639 aaKnown RBP17.22■□□□□ 0.35
TRAPPC9-211ENST00000521700 SPANXN3Q5MJ09 141 aa17.22■□□□□ 0.35
TRAPPC9-211ENST00000521700 HIBCHQ6NVY1 386 aaPredicted RBP17.22■□□□□ 0.35
TRAPPC9-211ENST00000521700 MAGEC3Q8TD91 643 aa17.22■□□□□ 0.35
TRAPPC9-211ENST00000521700 N4BP2L2Q92802 583 aaPredicted RBP17.22■□□□□ 0.35
TRAPPC9-211ENST00000521700 KCNJ9Q92806 393 aa17.22■□□□□ 0.35
TRAPPC9-211ENST00000521700 FAM167BQ9BTA0 163 aa17.22■□□□□ 0.35
TRAPPC9-211ENST00000521700 NAT9Q9BTE0 207 aa17.22■□□□□ 0.35
TRAPPC9-211ENST00000521700 RAB11FIP5Q9BXF6 653 aa17.22■□□□□ 0.35
TRAPPC9-211ENST00000521700 CCDC68Q9H2F9 335 aa17.22■□□□□ 0.35
TRAPPC9-211ENST00000521700 ACTL8Q9H568 366 aa17.22■□□□□ 0.35
TRAPPC9-211ENST00000521700 PLAC1Q9HBJ0 212 aa17.22■□□□□ 0.35
TRAPPC9-211ENST00000521700 GEMIN8Q9NWZ8 242 aaKnown RBP17.22■□□□□ 0.35
TRAPPC9-211ENST00000521700 KLHL42Q9P2K6 505 aa17.22■□□□□ 0.35
TRAPPC9-211ENST00000521700 FARSAQ9Y285 508 aaKnown RBP17.22■□□□□ 0.35
TRAPPC9-211ENST00000521700 DHRS7Q9Y394 339 aa17.22■□□□□ 0.35
TRAPPC9-211ENST00000521700 SEC16AO15027 2179 aa17.21■□□□□ 0.35
TRAPPC9-211ENST00000521700 TP73O15350 636 aa17.21■□□□□ 0.35
TRAPPC9-211ENST00000521700 PSIP1O75475 530 aaKnown RBP17.21■□□□□ 0.35
TRAPPC9-211ENST00000521700 OR2B3O76000 313 aa17.21■□□□□ 0.35
TRAPPC9-211ENST00000521700 PTPN4P29074 926 aa17.21■□□□□ 0.35
TRAPPC9-211ENST00000521700 ELK3P41970 407 aa17.21■□□□□ 0.35
TRAPPC9-211ENST00000521700 ITGA8P53708 1063 aa17.21■□□□□ 0.35
TRAPPC9-211ENST00000521700 POLE2P56282 527 aa17.21■□□□□ 0.35
TRAPPC9-211ENST00000521700 RPS18P62269 152 aaKnown RBP17.21■□□□□ 0.35
TRAPPC9-211ENST00000521700 RPS15P62841 145 aaKnown RBP17.21■□□□□ 0.35
TRAPPC9-211ENST00000521700 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.21■□□□□ 0.35
TRAPPC9-211ENST00000521700 HP1BP3Q5SSJ5 553 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC9-211ENST00000521700 NEK10Q6ZWH5 1172 aa17.21■□□□□ 0.35
TRAPPC9-211ENST00000521700 GPR135Q8IZ08 494 aa17.21■□□□□ 0.35
TRAPPC9-211ENST00000521700 PDIK1LQ8N165 341 aa17.21■□□□□ 0.35
TRAPPC9-211ENST00000521700 C2CD4AQ8NCU7 369 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC9-211ENST00000521700 HMGCLL1Q8TB92 370 aa17.21■□□□□ 0.35
TRAPPC9-211ENST00000521700 INPP5DQ92835 1189 aa17.21■□□□□ 0.35
TRAPPC9-211ENST00000521700 KRT12Q99456 494 aa17.21■□□□□ 0.35
TRAPPC9-211ENST00000521700 AARSD1Q9BTE6 412 aaKnown RBP17.21■□□□□ 0.35
TRAPPC9-211ENST00000521700 TRIM31Q9BZY9 425 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms