RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 E7EQ34 232 aa13.68□□□□□ -0.22
VEGFA-221ENST00000520265 SMAPO00193 183 aa13.68□□□□□ -0.22
VEGFA-221ENST00000520265 NDC80O14777 642 aa13.68□□□□□ -0.22
VEGFA-221ENST00000520265 NKX2-8O15522 239 aa13.68□□□□□ -0.22
VEGFA-221ENST00000520265 HAUS5O94927 633 aa13.68□□□□□ -0.22
VEGFA-221ENST00000520265 CATP04040 527 aaKnown RBP13.68□□□□□ -0.22
VEGFA-221ENST00000520265 KLK3P07288 261 aaPredicted RBP13.68□□□□□ -0.22
VEGFA-221ENST00000520265 TPBGLP0DKB5 382 aa13.68□□□□□ -0.22
VEGFA-221ENST00000520265 MAGP20916 626 aa13.68□□□□□ -0.22
VEGFA-221ENST00000520265 CD9P21926 228 aa13.68□□□□□ -0.22
VEGFA-221ENST00000520265 RPL21P46778 160 aaKnown RBP13.68□□□□□ -0.22
VEGFA-221ENST00000520265 ADARP55265 1226 aaKnown RBP13.68□□□□□ -0.22
VEGFA-221ENST00000520265 ITGA1P56199 1179 aa13.68□□□□□ -0.22
VEGFA-221ENST00000520265 MC1RQ01726 317 aa13.68□□□□□ -0.22
VEGFA-221ENST00000520265 PDIA2Q13087 525 aaKnown RBP13.68□□□□□ -0.22
VEGFA-221ENST00000520265 HIBCHQ6NVY1 386 aaPredicted RBP13.68□□□□□ -0.22
VEGFA-221ENST00000520265 CDHR3Q6ZTQ4 885 aa13.68□□□□□ -0.22
VEGFA-221ENST00000520265 MAATS1Q7Z4T9 603 aa13.68□□□□□ -0.22
VEGFA-221ENST00000520265 IGDCC3Q8IVU1 814 aa13.68□□□□□ -0.22
VEGFA-221ENST00000520265 CPNE9Q8IYJ1 553 aa13.68□□□□□ -0.22
VEGFA-221ENST00000520265 GPATCH11Q8N954 259 aa13.68□□□□□ -0.22
VEGFA-221ENST00000520265 BBOF1Q8ND07 529 aa13.68□□□□□ -0.22
VEGFA-221ENST00000520265 SPATA4Q8NEY3 305 aa13.68□□□□□ -0.22
VEGFA-221ENST00000520265 OR2L8Q8NGY9 312 aa13.68□□□□□ -0.22
VEGFA-221ENST00000520265 OR1L3Q8NH93 324 aa13.68□□□□□ -0.22
VEGFA-221ENST00000520265 SLC22A18Q96BI1 424 aa13.68□□□□□ -0.22
VEGFA-221ENST00000520265 CERS2Q96G23 380 aa13.68□□□□□ -0.22
VEGFA-221ENST00000520265 TCTN2Q96GX1 697 aa13.68□□□□□ -0.22
VEGFA-221ENST00000520265 ACTR5Q9H9F9 607 aaPredicted RBP13.68□□□□□ -0.22
VEGFA-221ENST00000520265 LHX9Q9NQ69 397 aa13.68□□□□□ -0.22
VEGFA-221ENST00000520265 FAM114A2Q9NRY5 505 aa13.68□□□□□ -0.22
VEGFA-221ENST00000520265 INTS7Q9NVH2 962 aaKnown RBP13.68□□□□□ -0.22
VEGFA-221ENST00000520265 SLC17A6Q9P2U8 582 aa13.68□□□□□ -0.22
VEGFA-221ENST00000520265 KCND3Q9UK17 655 aa13.68□□□□□ -0.22
VEGFA-221ENST00000520265 CACNA1GO43497 2377 aa13.67□□□□□ -0.22
VEGFA-221ENST00000520265 LOC400499M0QZD8 3231 aa13.67□□□□□ -0.22
VEGFA-221ENST00000520265 PABPN1LA6NDY0 278 aaKnown RBP13.67□□□□□ -0.22
VEGFA-221ENST00000520265 OR2B3O76000 313 aa13.67□□□□□ -0.22
VEGFA-221ENST00000520265 FAM87AP0C7U9 286 aa13.67□□□□□ -0.22
VEGFA-221ENST00000520265 SAT1P21673 171 aa13.67□□□□□ -0.22
VEGFA-221ENST00000520265 MCM3P25205 808 aa13.67□□□□□ -0.22
VEGFA-221ENST00000520265 PSMB5P28074 263 aa13.67□□□□□ -0.22
VEGFA-221ENST00000520265 PEBP1P30086 187 aaKnown RBP13.67□□□□□ -0.22
VEGFA-221ENST00000520265 RPS15P62841 145 aaKnown RBP13.67□□□□□ -0.22
VEGFA-221ENST00000520265 CDC20Q12834 499 aa13.67□□□□□ -0.22
VEGFA-221ENST00000520265 DNASE1L3Q13609 305 aa13.67□□□□□ -0.22
VEGFA-221ENST00000520265 ERV3-1Q14264 604 aa13.67□□□□□ -0.22
VEGFA-221ENST00000520265 SLC5A12Q1EHB4 618 aa13.67□□□□□ -0.22
VEGFA-221ENST00000520265 DEFB109BQ30KR1 87 aa13.67□□□□□ -0.22
VEGFA-221ENST00000520265 ATP1A1-AS1Q5TC04 95 aa13.67□□□□□ -0.22
VEGFA-221ENST00000520265 UGT3A1Q6NUS8 523 aa13.67□□□□□ -0.22
VEGFA-221ENST00000520265 FAM199XQ6PEV8 388 aaPredicted RBP13.67□□□□□ -0.22
VEGFA-221ENST00000520265 SPNS2Q8IVW8 549 aa13.67□□□□□ -0.22
VEGFA-221ENST00000520265 ZBED8Q8IZ13 594 aa13.67□□□□□ -0.22
VEGFA-221ENST00000520265 LINC01555Q8NAE3 123 aa13.67□□□□□ -0.22
VEGFA-221ENST00000520265 SNRNP27Q8WVK2 155 aaKnown RBP13.67□□□□□ -0.22
VEGFA-221ENST00000520265 KCNJ9Q92806 393 aa13.67□□□□□ -0.22
VEGFA-221ENST00000520265 SLC45A3Q96JT2 553 aa13.67□□□□□ -0.22
VEGFA-221ENST00000520265 SLC30A3Q99726 388 aa13.67□□□□□ -0.22
VEGFA-221ENST00000520265 MIPEPQ99797 713 aa13.67□□□□□ -0.22
VEGFA-221ENST00000520265 ACAT2Q9BWD1 397 aa13.67□□□□□ -0.22
VEGFA-221ENST00000520265 SYTL2Q9HCH5 934 aa13.67□□□□□ -0.22
VEGFA-221ENST00000520265 UTP11Q9Y3A2 253 aaKnown RBP13.67□□□□□ -0.22
VEGFA-221ENST00000520265 COMMD10Q9Y6G5 202 aa13.67□□□□□ -0.22
VEGFA-221ENST00000520265 CDC14CA4D256 554 aa13.66□□□□□ -0.22
VEGFA-221ENST00000520265 FAM187AA6NFU0 413 aa13.66□□□□□ -0.22
VEGFA-221ENST00000520265 ARHGEF33A8MVX0 844 aa13.66□□□□□ -0.22
VEGFA-221ENST00000520265 RAD51CO43502 376 aa13.66□□□□□ -0.22
VEGFA-221ENST00000520265 URI1O94763 535 aaPredicted RBP13.66□□□□□ -0.22
VEGFA-221ENST00000520265 IVDP26440 423 aa13.66□□□□□ -0.22
VEGFA-221ENST00000520265 OAS2P29728 719 aaKnown RBP13.66□□□□□ -0.22
VEGFA-221ENST00000520265 ATP5DP30049 168 aa13.66□□□□□ -0.22
VEGFA-221ENST00000520265 RPA3P35244 121 aaPredicted RBP13.66□□□□□ -0.22
VEGFA-221ENST00000520265 RGS4P49798 205 aa13.66□□□□□ -0.22
VEGFA-221ENST00000520265 CLCN7P51798 805 aa13.66□□□□□ -0.22
VEGFA-221ENST00000520265 CKAP4Q07065 602 aaKnown RBP13.66□□□□□ -0.22
VEGFA-221ENST00000520265 GPS2Q13227 327 aa13.66□□□□□ -0.22
VEGFA-221ENST00000520265 PDAP1Q13442 181 aaKnown RBP13.66□□□□□ -0.22
VEGFA-221ENST00000520265 TBR1Q16650 682 aa13.66□□□□□ -0.22
VEGFA-221ENST00000520265 PTCHD3Q3KNS1 767 aa13.66□□□□□ -0.22
VEGFA-221ENST00000520265 THEMIS2Q5TEJ8 643 aa13.66□□□□□ -0.22
VEGFA-221ENST00000520265 C1orf189Q5VU69 101 aa13.66□□□□□ -0.22
VEGFA-221ENST00000520265 ZNF549Q6P9A3 640 aa13.66□□□□□ -0.22
VEGFA-221ENST00000520265 BORAQ6PGQ7 559 aa13.66□□□□□ -0.22
VEGFA-221ENST00000520265 CCDC25Q86WR0 208 aa13.66□□□□□ -0.22
VEGFA-221ENST00000520265 PALM2Q8IXS6 379 aa13.66□□□□□ -0.22
VEGFA-221ENST00000520265 SYTL1Q8IYJ3 562 aa13.66□□□□□ -0.22
VEGFA-221ENST00000520265 C2CD4AQ8NCU7 369 aaPredicted RBP13.66□□□□□ -0.22
VEGFA-221ENST00000520265 FBXO36Q8NEA4 188 aa13.66□□□□□ -0.22
VEGFA-221ENST00000520265 OR9A1PQ8NGU1 263 aa13.66□□□□□ -0.22
VEGFA-221ENST00000520265 TTC9Q92623 222 aa13.66□□□□□ -0.22
VEGFA-221ENST00000520265 INPP5DQ92835 1189 aa13.66□□□□□ -0.22
VEGFA-221ENST00000520265 FCRL4Q96PJ5 515 aa13.66□□□□□ -0.22
VEGFA-221ENST00000520265 AARSD1Q9BTE6 412 aaKnown RBP13.66□□□□□ -0.22
VEGFA-221ENST00000520265 SLC12A9Q9BXP2 914 aa13.66□□□□□ -0.22
VEGFA-221ENST00000520265 SPRY4Q9C004 299 aa13.66□□□□□ -0.22
VEGFA-221ENST00000520265 TWSG1Q9GZX9 223 aa13.66□□□□□ -0.22
VEGFA-221ENST00000520265 FAM60AQ9NP50 221 aa13.66□□□□□ -0.22
VEGFA-221ENST00000520265 TXLNGQ9NUQ3 528 aa13.66□□□□□ -0.22
VEGFA-221ENST00000520265 SPATA7Q9P0W8 599 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms