RNA–Protein interactions for RNA: ENST00000520166.5

TSNARE1-205, Transcript of t-SNARE domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSNARE1, Length 1,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-205ENST00000520166 CHMP6Q96FZ7 201 aa16.5■□□□□ 0.23
TSNARE1-205ENST00000520166 ELF4Q99607 663 aaPredicted RBP16.5■□□□□ 0.23
TSNARE1-205ENST00000520166 SPASTQ9UBP0 616 aa16.5■□□□□ 0.23
TSNARE1-205ENST00000520166 E7ENX8 843 aa16.5■□□□□ 0.23
TSNARE1-205ENST00000520166 CASC3O15234 703 aaKnown RBP16.5■□□□□ 0.23
TSNARE1-205ENST00000520166 EDF1O60869 148 aaKnown RBP16.5■□□□□ 0.23
TSNARE1-205ENST00000520166 STK16O75716 305 aa16.5■□□□□ 0.23
TSNARE1-205ENST00000520166 WDR47O94967 919 aa16.5■□□□□ 0.23
TSNARE1-205ENST00000520166 GGT5P36269 586 aa16.5■□□□□ 0.23
TSNARE1-205ENST00000520166 HALP42357 657 aa16.5■□□□□ 0.23
TSNARE1-205ENST00000520166 FOXA1P55317 472 aa16.5■□□□□ 0.23
TSNARE1-205ENST00000520166 AP1S2P56377 157 aa16.5■□□□□ 0.23
TSNARE1-205ENST00000520166 HNRNPKP61978 463 aaKnown RBP eCLIP16.5■□□□□ 0.237e-7■■■■□ 24.6
TSNARE1-205ENST00000520166 TAP2Q03519 686 aa16.5■□□□□ 0.23
TSNARE1-205ENST00000520166 CLCQ05315 142 aa16.5■□□□□ 0.23
TSNARE1-205ENST00000520166 ATG16L1Q676U5 607 aa16.5■□□□□ 0.23
TSNARE1-205ENST00000520166 ANKS6Q68DC2 871 aa16.5■□□□□ 0.23
TSNARE1-205ENST00000520166 RAB44Q7Z6P3 723 aaPredicted RBP16.5■□□□□ 0.23
TSNARE1-205ENST00000520166 FAM20CQ8IXL6 584 aa16.5■□□□□ 0.23
TSNARE1-205ENST00000520166 RAD51AP1Q96B01 352 aa16.5■□□□□ 0.23
TSNARE1-205ENST00000520166 CCDC126Q96EE4 140 aa16.5■□□□□ 0.23
TSNARE1-205ENST00000520166 KCNA7Q96RP8 456 aa16.5■□□□□ 0.23
TSNARE1-205ENST00000520166 C1QTNF3Q9BXJ4 246 aa16.5■□□□□ 0.23
TSNARE1-205ENST00000520166 EPN3Q9H201 632 aa16.5■□□□□ 0.23
TSNARE1-205ENST00000520166 NOL11Q9H8H0 719 aaKnown RBP16.5■□□□□ 0.23
TSNARE1-205ENST00000520166 THAP1Q9NVV9 213 aa16.5■□□□□ 0.23
TSNARE1-205ENST00000520166 ICKQ9UPZ9 632 aa16.5■□□□□ 0.23
TSNARE1-205ENST00000520166 NPHS1O60500 1241 aa16.49■□□□□ 0.23
TSNARE1-205ENST00000520166 HSPA4LO95757 839 aa16.49■□□□□ 0.23
TSNARE1-205ENST00000520166 GRK2P25098 689 aa16.49■□□□□ 0.23
TSNARE1-205ENST00000520166 PSMB5P28074 263 aa16.49■□□□□ 0.23
TSNARE1-205ENST00000520166 PNLIPRP1P54315 467 aa16.49■□□□□ 0.23
TSNARE1-205ENST00000520166 GTF2H2Q13888 395 aa16.49■□□□□ 0.23
TSNARE1-205ENST00000520166 ELOCQ15369 112 aa16.49■□□□□ 0.23
TSNARE1-205ENST00000520166 DUOXA1Q1HG43 343 aa16.49■□□□□ 0.23
TSNARE1-205ENST00000520166 GTF2H2CQ6P1K8 395 aa16.49■□□□□ 0.23
TSNARE1-205ENST00000520166 SYVN1Q86TM6 617 aa16.49■□□□□ 0.23
TSNARE1-205ENST00000520166 SYTL1Q8IYJ3 562 aa16.49■□□□□ 0.23
TSNARE1-205ENST00000520166 SFRP1Q8N474 314 aa16.49■□□□□ 0.23
TSNARE1-205ENST00000520166 OR4E2Q8NGC2 313 aa16.49■□□□□ 0.23
TSNARE1-205ENST00000520166 PPP4R1Q8TF05 950 aa16.49■□□□□ 0.23
TSNARE1-205ENST00000520166 UBTD2Q8WUN7 234 aa16.49■□□□□ 0.23
TSNARE1-205ENST00000520166 SKA1Q96BD8 255 aa16.49■□□□□ 0.23
TSNARE1-205ENST00000520166 CXorf40BQ96DE9 158 aa16.49■□□□□ 0.23
TSNARE1-205ENST00000520166 CNDP1Q96KN2 507 aa16.49■□□□□ 0.23
TSNARE1-205ENST00000520166 ERVMER34-1Q9H9K5 563 aa16.49■□□□□ 0.23
TSNARE1-205ENST00000520166 SLC40A1Q9NP59 571 aa16.49■□□□□ 0.23
TSNARE1-205ENST00000520166 CPNE7Q9UBL6 633 aa16.49■□□□□ 0.23
TSNARE1-205ENST00000520166 SUSD2Q9UGT4 822 aa16.49■□□□□ 0.23
TSNARE1-205ENST00000520166 FIS1Q9Y3D6 152 aa16.49■□□□□ 0.23
TSNARE1-205ENST00000520166 LMO7DNF2Z398 122 aa16.48■□□□□ 0.23
TSNARE1-205ENST00000520166 NOBOXO60393 691 aa16.48■□□□□ 0.23
TSNARE1-205ENST00000520166 KATNA1O75449 491 aa16.48■□□□□ 0.23
TSNARE1-205ENST00000520166 JUNP05412 331 aaKnown RBP16.48■□□□□ 0.23
TSNARE1-205ENST00000520166 SERPINB3P29508 390 aa16.48■□□□□ 0.23
TSNARE1-205ENST00000520166 TBPL1P62380 186 aa16.48■□□□□ 0.23
TSNARE1-205ENST00000520166 UBE2IP63279 158 aaKnown RBP16.48■□□□□ 0.23
TSNARE1-205ENST00000520166 GPR18Q14330 331 aa16.48■□□□□ 0.23
TSNARE1-205ENST00000520166 TUBB8Q3ZCM7 444 aa16.48■□□□□ 0.23
TSNARE1-205ENST00000520166 CLEC6AQ6EIG7 209 aa16.48■□□□□ 0.23
TSNARE1-205ENST00000520166 THOC6Q86W42 341 aaKnown RBP16.48■□□□□ 0.23
TSNARE1-205ENST00000520166 TRIM42Q8IWZ5 723 aa16.48■□□□□ 0.23
TSNARE1-205ENST00000520166 OR56A3Q8NH54 315 aa16.48■□□□□ 0.23
TSNARE1-205ENST00000520166 RFWD2Q8NHY2 731 aa16.48■□□□□ 0.23
TSNARE1-205ENST00000520166 RAB3IL1Q8TBN0 382 aa16.48■□□□□ 0.23
TSNARE1-205ENST00000520166 ACAT2Q9BWD1 397 aa16.48■□□□□ 0.23
TSNARE1-205ENST00000520166 GAREM1Q9H706 876 aa16.48■□□□□ 0.23
TSNARE1-205ENST00000520166 IPPKQ9H8X2 491 aa16.48■□□□□ 0.23
TSNARE1-205ENST00000520166 SPHK1Q9NYA1 384 aa16.48■□□□□ 0.23
TSNARE1-205ENST00000520166 DOLKQ9UPQ8 538 aa16.48■□□□□ 0.23
TSNARE1-205ENST00000520166 A0A1W2PPV9 198 aa16.48■□□□□ 0.23
TSNARE1-205ENST00000520166 TMEM114B3SHH9 223 aa16.48■□□□□ 0.23
TSNARE1-205ENST00000520166 K7EPI3 171 aa16.48■□□□□ 0.23
TSNARE1-205ENST00000520166 PPM1DO15297 605 aa16.48■□□□□ 0.23
TSNARE1-205ENST00000520166 XRCC1P18887 633 aaPredicted RBP16.48■□□□□ 0.23
TSNARE1-205ENST00000520166 MPLP40238 635 aa16.48■□□□□ 0.23
TSNARE1-205ENST00000520166 HNMTP50135 292 aa16.48■□□□□ 0.23
TSNARE1-205ENST00000520166 ERVPABLB-1P60509 514 aa16.48■□□□□ 0.23
TSNARE1-205ENST00000520166 RBBP7Q16576 425 aa16.48■□□□□ 0.23
TSNARE1-205ENST00000520166 ZNF423Q2M1K9 1284 aa16.48■□□□□ 0.23
TSNARE1-205ENST00000520166 CDKL4Q5MAI5 379 aa16.48■□□□□ 0.23
TSNARE1-205ENST00000520166 ZC3H14Q6PJT7 736 aaKnown RBP16.48■□□□□ 0.23
TSNARE1-205ENST00000520166 KANSL1Q7Z3B3 1105 aa16.48■□□□□ 0.23
TSNARE1-205ENST00000520166 MAVSQ7Z434 540 aa16.48■□□□□ 0.23
TSNARE1-205ENST00000520166 CUZD1Q86UP6 607 aa16.48■□□□□ 0.23
TSNARE1-205ENST00000520166 GKN2Q86XP6 184 aa16.48■□□□□ 0.23
TSNARE1-205ENST00000520166 SNX31Q8N9S9 440 aa16.48■□□□□ 0.23
TSNARE1-205ENST00000520166 CCT8L2Q96SF2 557 aa16.48■□□□□ 0.23
TSNARE1-205ENST00000520166 MVB12BQ9H7P6 319 aa16.48■□□□□ 0.23
TSNARE1-205ENST00000520166 MID1IP1Q9NPA3 183 aa16.48■□□□□ 0.23
TSNARE1-205ENST00000520166 FAM86C1Q9NVL1 165 aa16.48■□□□□ 0.23
TSNARE1-205ENST00000520166 OPTCQ9UBM4 332 aa16.48■□□□□ 0.23
TSNARE1-205ENST00000520166 ARID1BQ8NFD5 2236 aaPredicted RBP16.47■□□□□ 0.23
TSNARE1-205ENST00000520166 A0A1B0GTQ1 180 aa16.47■□□□□ 0.23
TSNARE1-205ENST00000520166 PABPN1LA6NDY0 278 aaKnown RBP16.47■□□□□ 0.23
TSNARE1-205ENST00000520166 NPPBP16860 134 aa16.47■□□□□ 0.23
TSNARE1-205ENST00000520166 PEBP1P30086 187 aaKnown RBP16.47■□□□□ 0.23
TSNARE1-205ENST00000520166 MAPK9P45984 424 aa16.47■□□□□ 0.23
TSNARE1-205ENST00000520166 RXRGP48443 463 aa16.47■□□□□ 0.23
TSNARE1-205ENST00000520166 PIK3CGP48736 1102 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms