RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 PRKCZQ05513 592 aa-1.3□□□□□ -2.62
RNU6-539P-201ENST00000516665 FAM50AQ14320 339 aaKnown RBP-1.3□□□□□ -2.62
RNU6-539P-201ENST00000516665 HERPUD1Q15011 391 aa-1.3□□□□□ -2.62
RNU6-539P-201ENST00000516665 TTF1Q15361 905 aaPredicted RBP-1.3□□□□□ -2.62
RNU6-539P-201ENST00000516665 TAF13Q15543 124 aa-1.3□□□□□ -2.62
RNU6-539P-201ENST00000516665 RINT1Q6NUQ1 792 aa-1.3□□□□□ -2.62
RNU6-539P-201ENST00000516665 EMBQ6PCB8 327 aa-1.3□□□□□ -2.62
RNU6-539P-201ENST00000516665 GJB7Q6PEY0 223 aa-1.3□□□□□ -2.62
RNU6-539P-201ENST00000516665 PAPD4Q6PIY7 484 aaKnown RBP-1.3□□□□□ -2.62
RNU6-539P-201ENST00000516665 GPC2Q8N158 579 aa-1.3□□□□□ -2.62
RNU6-539P-201ENST00000516665 PRSS35Q8N3Z0 413 aa-1.3□□□□□ -2.62
RNU6-539P-201ENST00000516665 C14orf178Q8N769 122 aaPredicted RBP-1.3□□□□□ -2.62
RNU6-539P-201ENST00000516665 OR52B6Q8NGF0 335 aa-1.3□□□□□ -2.62
RNU6-539P-201ENST00000516665 SLC22A8Q8TCC7 542 aa-1.3□□□□□ -2.62
RNU6-539P-201ENST00000516665 CHAC2Q8WUX2 184 aa-1.3□□□□□ -2.62
RNU6-539P-201ENST00000516665 PABPC5Q96DU9 382 aaKnown RBP-1.3□□□□□ -2.62
RNU6-539P-201ENST00000516665 HSPBAP1Q96EW2 488 aa-1.3□□□□□ -2.62
RNU6-539P-201ENST00000516665 MRFAP1L1Q96HT8 127 aa-1.3□□□□□ -2.62
RNU6-539P-201ENST00000516665 SPATA17Q96L03 361 aa-1.3□□□□□ -2.62
RNU6-539P-201ENST00000516665 FOPNLQ96NB1 174 aa-1.3□□□□□ -2.62
RNU6-539P-201ENST00000516665 NUF2Q9BZD4 464 aa-1.3□□□□□ -2.62
RNU6-539P-201ENST00000516665 MARCH7Q9H992 704 aa-1.3□□□□□ -2.62
RNU6-539P-201ENST00000516665 MBNL1Q9NR56 388 aaKnown RBP-1.3□□□□□ -2.62
RNU6-539P-201ENST00000516665 BEX4Q9NWD9 120 aaPredicted RBP-1.3□□□□□ -2.62
RNU6-539P-201ENST00000516665 NPAP1Q9NZP6 1156 aa-1.3□□□□□ -2.62
RNU6-539P-201ENST00000516665 NFU1Q9UMS0 254 aa-1.3□□□□□ -2.62
RNU6-539P-201ENST00000516665 A0A1B0GUA9 196 aa-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 K7EQG2 157 aa-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 ACKR2O00590 384 aa-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 TLX2O43763 284 aaPredicted RBP-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 PRKRAO75569 313 aaKnown RBP-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 RHBDL1O75783 438 aa-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 IGKV1-39P01597 117 aa-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 ANGP03950 147 aaKnown RBP-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 IGKV1D-39P04432 117 aa-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 GLAP06280 429 aa-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 SP9P0CG40 484 aa-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 ACP2P11117 423 aa-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 SLC2A2P11168 524 aaPredicted RBP-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 CHN1P15882 459 aa-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 PRKAR2BP31323 418 aa-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 SHMT1P34896 483 aa-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 SUCLG1P53597 346 aaKnown RBP-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 RIPPLY3P57055 190 aa-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 CXCL6P80162 114 aa-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 VLDLRP98155 873 aa-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 DHODHQ02127 395 aa-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 CHRNDQ07001 517 aa-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 PRKAA1Q13131 559 aa-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 ABCA11PQ4W5N1 156 aa-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 C5orf47Q569G3 176 aa-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 FBXO47Q5MNV8 452 aa-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 LY6G6FQ5SQ64 297 aa-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 DNLZQ5SXM8 178 aa-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 OVCH2Q7RTZ1 564 aa-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 RPAINQ86UA6 219 aa-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 L3MBTL4Q8NA19 623 aa-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 AVL9Q8NBF6 648 aa-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 RNF149Q8NC42 400 aa-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 OR10G7Q8NGN6 311 aa-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 NEIL3Q8TAT5 605 aa-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 UTP15Q8TED0 518 aaKnown RBP-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 APOBEC4Q8WW27 367 aaKnown RBP-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 HMGB4Q8WW32 186 aa-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 HSPH1Q92598 858 aa-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 IQCDQ96DY2 449 aa-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 VSIG2Q96IQ7 327 aa-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 LINC00477Q96M19 166 aa-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 GUCD1Q96NT3 240 aa-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 TAAR6Q96RI8 345 aa-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 SARGQ9BW04 601 aa-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 PLA2G2FQ9BZM2 168 aa-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 NANOGQ9H9S0 305 aa-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 ACSS1Q9NUB1 689 aaPredicted RBP-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 LIN7CQ9NUP9 197 aaKnown RBP-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 OR6C2Q9NZP2 312 aa-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 KLRF1Q9NZS2 232 aa-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 BAIAP2L1Q9UHR4 511 aa-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 YIPF1Q9Y548 306 aa-1.31□□□□□ -2.62
RNU6-539P-201ENST00000516665 MUC2Q02817 5179 aa-1.32□□□□□ -2.62
RNU6-539P-201ENST00000516665 FAM90A18PA6NE21 464 aa-1.32□□□□□ -2.62
RNU6-539P-201ENST00000516665 FAM90A16PA6NEW6 464 aa-1.32□□□□□ -2.62
RNU6-539P-201ENST00000516665 FAM90A9PA6NNJ1 464 aa-1.32□□□□□ -2.62
RNU6-539P-201ENST00000516665 C15orf62A8K5M9 175 aa-1.32□□□□□ -2.62
RNU6-539P-201ENST00000516665 A8MU76 341 aa-1.32□□□□□ -2.62
RNU6-539P-201ENST00000516665 FAM90A5PA8MXJ8 464 aa-1.32□□□□□ -2.62
RNU6-539P-201ENST00000516665 K7N7A8 449 aa-1.32□□□□□ -2.62
RNU6-539P-201ENST00000516665 SMAD9O15198 467 aaKnown RBP-1.32□□□□□ -2.62
RNU6-539P-201ENST00000516665 AVILO75366 819 aa-1.32□□□□□ -2.62
RNU6-539P-201ENST00000516665 TUSC2O75896 110 aa-1.32□□□□□ -2.62
RNU6-539P-201ENST00000516665 HSPB1P04792 205 aaKnown RBP-1.32□□□□□ -2.62
RNU6-539P-201ENST00000516665 FAM90A15PP0C7V4 464 aa-1.32□□□□□ -2.62
RNU6-539P-201ENST00000516665 FAM90A14PP0C7W9 464 aa-1.32□□□□□ -2.62
RNU6-539P-201ENST00000516665 MYL4P12829 197 aa-1.32□□□□□ -2.62
RNU6-539P-201ENST00000516665 HERVK_113P61574 105 aa-1.32□□□□□ -2.62
RNU6-539P-201ENST00000516665 MTMR1Q13613 665 aa-1.32□□□□□ -2.62
RNU6-539P-201ENST00000516665 CDH18Q13634 790 aa-1.32□□□□□ -2.62
RNU6-539P-201ENST00000516665 DCTN1Q14203 1278 aa-1.32□□□□□ -2.62
RNU6-539P-201ENST00000516665 TNIP1Q15025 636 aa-1.32□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms